| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800195
Identifier: 114800195
GI number: 114800195
Start: 983770
End: 985080
Strand: Direct
Name: 114800195
Synonym: HNE_0970
Alternate gene names: NA
Gene position: 983770-985080 (Clockwise)
Preceding gene: 114799361
Following gene: 114797157
Centisome position: 26.55
GC content: 63.31
Gene sequence:
>1311_bases ATGTCTATTTCCAGGCGCGTTCTGCGCACCGCTGCGATGGCGGCGATTCTGATGGCTGGCGCGTTGCCGGCGGTTTCCGA AACCGTTCTGATCCATGCGGGTAAAGTGCTCGATGTGCCGGGCAATGCGCCGCGTGGGGCCACCACGATTACGGTGACCG ATGGCAAGATCGTATCGCTTGAGAACGGGCACAAGAGGGCAAGCGGCAGTGACGTGCGGGTGATCGACCTGAAGGACAGC TTTGTGCTGCCGGGCCTGATCGACAGCCATGTGCACCTGACCTCGGATTCCGGCGGGATCGTCTGGCAGCTGGAAGAGAT CACCCTGTCGCCGGCGGCGCAGGCGTTTGATGCCTGGGACAATGGCATGAAGACCCTGCGCGCGGGCTTTACCACCGTCC GCAATCTGGGCGATGGCGACGGCGCGGTGCTGGCGCTGCGCGACGCGGTCAATGACGGGCAGGTGCAGGGGCCGCGGATT CTGGACGCGGCAAACTCCATCTCTGTTTCCTCCGGCCATATGGACAGCTCGCTGGGATACCGCGATGAGCTGCGGCCCTA TTTCAAGGCGGCGGGCAATACATGTGACGGCGCCGAAGACTGCCGCCGGGCCGTGCGCCTGCAAGTCTCGCGCGGGGCTG ACCTGATCAAGCTGGCGACCACGGGCGGCGTCAACAGCCGGATCGGCGCGGGCCTGGGCAAGCAGATGTTCGAGGATGAA GCGGTTGCCATTGTCGAAACGGCAAAGCTGTTCGGCAAAAAGGTGGCCGCCCATGCCCATGGCGGCGACGGTATCCGGCT GGCGCTGGAGGCGGGCGTTGATTCCATCGAGCATGGCACGATCCTCGACCCGGAAACCATCGAGGCGTTTGTGGCTTCGG GCGCCTATTACGTGCCGACGCTTTCGACCGTGAACGGATATATCGAGCGGATGGAAGCCAATCCCGATGCCTATGAGCCG GATGTGCGCGCCAAGATCGAGTGGCGCATCGGCATCACGGGCAAGAGCCTTGAGATTCTCTATCCCAAAGGCGTTCCGAT TGCCTTTGGCACCGATGCGGGCGTTTCCAAACATGGCCGCAATGCCGATGAGTTCGAGCTGATGGTGCGCTTTGGCATGT CGCCGATGGAGGCCATCAAGGCGGCGACGGTGAATGCGGCAGACCTGCTCGGCATCACCGATGTGGCCGGCACGCTGGAG CCGGGCAAGAGCGCCGACATCATCGCCGTGAAGGGCGACCCGATTGCCGATGTGAAGCTGCTGAAGTCGGTGAGCTTCGT GATGGCGCGCGGTGAGGTGGTGAAGGAGTAG
Upstream 100 bases:
>100_bases CGATCACTTTACGCCAGATGGGCGCGATGATGAGGGTTTTCTCGCCGCCAGCCTTCTATAAGAGTTATGCCAAATCTGTT TATCCGGGAGGCTTCACCCA
Downstream 100 bases:
>100_bases GGGCTTTAGAGAAAGGGCGAGCGTCTTATCCGGCCTCGCCCCCTCACCCCTGGCCCTCTCCCCCGGAGGAGGAGAGGGGT TCAAGGGCAGCGGCGTGGGC
Product: amidohydrolase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MSISRRVLRTAAMAAILMAGALPAVSETVLIHAGKVLDVPGNAPRGATTITVTDGKIVSLENGHKRASGSDVRVIDLKDS FVLPGLIDSHVHLTSDSGGIVWQLEEITLSPAAQAFDAWDNGMKTLRAGFTTVRNLGDGDGAVLALRDAVNDGQVQGPRI LDAANSISVSSGHMDSSLGYRDELRPYFKAAGNTCDGAEDCRRAVRLQVSRGADLIKLATTGGVNSRIGAGLGKQMFEDE AVAIVETAKLFGKKVAAHAHGGDGIRLALEAGVDSIEHGTILDPETIEAFVASGAYYVPTLSTVNGYIERMEANPDAYEP DVRAKIEWRIGITGKSLEILYPKGVPIAFGTDAGVSKHGRNADEFELMVRFGMSPMEAIKAATVNAADLLGITDVAGTLE PGKSADIIAVKGDPIADVKLLKSVSFVMARGEVVKE
Sequences:
>Translated_436_residues MSISRRVLRTAAMAAILMAGALPAVSETVLIHAGKVLDVPGNAPRGATTITVTDGKIVSLENGHKRASGSDVRVIDLKDS FVLPGLIDSHVHLTSDSGGIVWQLEEITLSPAAQAFDAWDNGMKTLRAGFTTVRNLGDGDGAVLALRDAVNDGQVQGPRI LDAANSISVSSGHMDSSLGYRDELRPYFKAAGNTCDGAEDCRRAVRLQVSRGADLIKLATTGGVNSRIGAGLGKQMFEDE AVAIVETAKLFGKKVAAHAHGGDGIRLALEAGVDSIEHGTILDPETIEAFVASGAYYVPTLSTVNGYIERMEANPDAYEP DVRAKIEWRIGITGKSLEILYPKGVPIAFGTDAGVSKHGRNADEFELMVRFGMSPMEAIKAATVNAADLLGITDVAGTLE PGKSADIIAVKGDPIADVKLLKSVSFVMARGEVVKE >Mature_435_residues SISRRVLRTAAMAAILMAGALPAVSETVLIHAGKVLDVPGNAPRGATTITVTDGKIVSLENGHKRASGSDVRVIDLKDSF VLPGLIDSHVHLTSDSGGIVWQLEEITLSPAAQAFDAWDNGMKTLRAGFTTVRNLGDGDGAVLALRDAVNDGQVQGPRIL DAANSISVSSGHMDSSLGYRDELRPYFKAAGNTCDGAEDCRRAVRLQVSRGADLIKLATTGGVNSRIGAGLGKQMFEDEA VAIVETAKLFGKKVAAHAHGGDGIRLALEAGVDSIEHGTILDPETIEAFVASGAYYVPTLSTVNGYIERMEANPDAYEPD VRAKIEWRIGITGKSLEILYPKGVPIAFGTDAGVSKHGRNADEFELMVRFGMSPMEAIKAATVNAADLLGITDVAGTLEP GKSADIIAVKGDPIADVKLLKSVSFVMARGEVVKE
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To S.coelicolor SCO1861 [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322248, Length=318, Percent_Identity=31.1320754716981, Blast_Score=141, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: NA
Molecular weight: Translated: 45813; Mature: 45681
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISRRVLRTAAMAAILMAGALPAVSETVLIHAGKVLDVPGNAPRGATTITVTDGKIVSL CCHHHHHHHHHHHHHHHHHCCCCHHCCEEEEECCEEEECCCCCCCCCEEEEEECCEEEEE ENGHKRASGSDVRVIDLKDSFVLPGLIDSHVHLTSDSGGIVWQLEEITLSPAAQAFDAWD CCCCCCCCCCCEEEEEECCCEECCCCCCCCEEEECCCCCEEEEEEEEECCCHHHHHHHHH NGMKTLRAGFTTVRNLGDGDGAVLALRDAVNDGQVQGPRILDAANSISVSSGHMDSSLGY HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCEECCCCCCCCCCC RDELRPYFKAAGNTCDGAEDCRRAVRLQVSRGADLIKLATTGGVNSRIGAGLGKQMFEDE HHHHHHHHHHCCCCCCCHHHHHHHHEEEECCCCCEEEEEECCCCCCHHCCCCCHHHHHCC AVAIVETAKLFGKKVAAHAHGGDGIRLALEAGVDSIEHGTILDPETIEAFVASGAYYVPT HHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEECC LSTVNGYIERMEANPDAYEPDVRAKIEWRIGITGKSLEILYPKGVPIAFGTDAGVSKHGR HHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCEEECCCCCCHHCCC NADEFELMVRFGMSPMEAIKAATVNAADLLGITDVAGTLEPGKSADIIAVKGDPIADVKL CHHHHHHHHHHCCCHHHHHHHHCCCHHHHCCHHHHCCCCCCCCCCCEEEECCCCCHHHHH LKSVSFVMARGEVVKE HHHHHHHHHCCHHHCC >Mature Secondary Structure SISRRVLRTAAMAAILMAGALPAVSETVLIHAGKVLDVPGNAPRGATTITVTDGKIVSL CHHHHHHHHHHHHHHHHHCCCCHHCCEEEEECCEEEECCCCCCCCCEEEEEECCEEEEE ENGHKRASGSDVRVIDLKDSFVLPGLIDSHVHLTSDSGGIVWQLEEITLSPAAQAFDAWD CCCCCCCCCCCEEEEEECCCEECCCCCCCCEEEECCCCCEEEEEEEEECCCHHHHHHHHH NGMKTLRAGFTTVRNLGDGDGAVLALRDAVNDGQVQGPRILDAANSISVSSGHMDSSLGY HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCEECCCCCCCCCCC RDELRPYFKAAGNTCDGAEDCRRAVRLQVSRGADLIKLATTGGVNSRIGAGLGKQMFEDE HHHHHHHHHHCCCCCCCHHHHHHHHEEEECCCCCEEEEEECCCCCCHHCCCCCHHHHHCC AVAIVETAKLFGKKVAAHAHGGDGIRLALEAGVDSIEHGTILDPETIEAFVASGAYYVPT HHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEECC LSTVNGYIERMEANPDAYEPDVRAKIEWRIGITGKSLEILYPKGVPIAFGTDAGVSKHGR HHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCEEECCCCCCHHCCC NADEFELMVRFGMSPMEAIKAATVNAADLLGITDVAGTLEPGKSADIIAVKGDPIADVKL CHHHHHHHHHHCCCHHHHHHHHCCCHHHHCCHHHHCCCCCCCCCCCEEEECCCCCHHHHH LKSVSFVMARGEVVKE HHHHHHHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]