| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800188
Identifier: 114800188
GI number: 114800188
Start: 3420990
End: 3422183
Strand: Direct
Name: 114800188
Synonym: HNE_3256
Alternate gene names: NA
Gene position: 3420990-3422183 (Clockwise)
Preceding gene: 114797497
Following gene: 114800147
Centisome position: 92.33
GC content: 66.08
Gene sequence:
>1194_bases ATGCTGATGGTGGGCACGGTGGCGGTTGCTGCCGGCATGAGCATCAACTTCGTGGTGGTGACGCCTTTGACGCGCAAGGC AGGCCTCAGCGAGATGGAGGTGGCGGGGTTCATGACGCTGTCGACCATCATTTTTGCGGTGATGATCCCCGTCTGGGGCC GGATTGCCGATCTTGTGGGGCGCAAGCGGGTGATGATCTTCTCCCTGTTTGCGACCGCGCTGACCAATATGGCGTTTCTC TTCACGCTGGAGGCCGGGCTTGCGGGCATTCTGACCGGCGCGTCCCTGCTGTTGACGCTGACTTTCGTGCGGGCCTGGTT TGGCCTGCTGGCGCCGGGGCTGCAGCCGGCGGCGATGGCGGCGATGACGGACGCGACGGTGCCGACAAACCGGGCGGCGG GCCTGGGCATGATTGGCGCGGCGATGGCCATCGGCTCGATCATCGGCCCGGCAGGCGCGGCCGTGCTGGCGCCGTTCGGC GCGCTGGCCCCGCTCTGGGGCACGATCGTTTTCTGTGTGCTCGTTGGCTTCCTGATTGCCTTCACCCTGCCCAGGACGGT GAAGCGCGCGCGCAATGCGCCGCGGCCCAGGCCTCTGTCGCTGACGGACACGCGGATGCGCCCGCACCTCCTCTTCCTGC TGATCTATTTCATCGCCATCGGCATGATGCAGCAGACGCTCGCCTGGTTTATCGAGGACCGCTACCGGCTGACCGAGACG CTGGGCGAGGACGCAGGCAAAGCCGCAGTGCTCTACACGGGCATCACATTCGCCTGTTATGCGGTGGCCTCGCTGATCGT GCAGTTTGGCTATATCAACCGTGTGAAGCCGGACCCGCGCAAGGTGTTGCCCATTGGCCTGGCGATGGTGGCGGGGGGCT ATCTGGCCGCCGATCTCTTCTATGAGCTGTATGTGGTCTATGCCTGCTTCTTTGTTGTGGGCGCAGGCGCGGCGCTGGCG ATCCCTTCCGCCAATGCGCTGGGCAGCCTCTCGGTGAGCCGGGAAGAACAGGGCGCGGCGGCCGCGCTGCTGGCGGTTGC CCCGCCCAGCGGATTTATCTTCGGGCCGATGATCGGCGCGTGGCTTTATGGGGTAAACCATGCCCTGCCCCTGCTTGGAG CTGCCACCATGGTGGGCGCGCTGGCGGTGTATGCGGTGCTGGTGACGGCGCGACGGCCGCTGACGCCGGGCTAG
Upstream 100 bases:
>100_bases AGGGCGCCCGCCCGGCCTAGTTTGGTATATCTTTTAATGGGTATATCGAATGCATTCCACTGACACGCCGCTGCATCCGC TGACGGCTTTCCAGAGAGCC
Downstream 100 bases:
>100_bases CAACGGGCAATTCGCCCTGCCCCGAGGAAAGGGTTTGCAAGGATTGGGTGGCGACATAGCTTGTGTCCCTTCTAGGGCGC CGGGGACCACACCAAATGGA
Product: major facilitator family transporter
Products: NA
Alternate protein names: MFS Transporter; Facilitator Superfamily Protein; Multidrug-Efflux Transporter; Facilitator Family Transporter; Facilitator Superfamily Permease; DrugH+ Antiporter-1 Family Protein; Mfs Transporter; Facilitator Superfamily Transporter; Drug Efflux Permease; Permease Of Facilitator Superfamily; MFS Family Transporter; MFS Superfamily Transporter
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MLMVGTVAVAAGMSINFVVVTPLTRKAGLSEMEVAGFMTLSTIIFAVMIPVWGRIADLVGRKRVMIFSLFATALTNMAFL FTLEAGLAGILTGASLLLTLTFVRAWFGLLAPGLQPAAMAAMTDATVPTNRAAGLGMIGAAMAIGSIIGPAGAAVLAPFG ALAPLWGTIVFCVLVGFLIAFTLPRTVKRARNAPRPRPLSLTDTRMRPHLLFLLIYFIAIGMMQQTLAWFIEDRYRLTET LGEDAGKAAVLYTGITFACYAVASLIVQFGYINRVKPDPRKVLPIGLAMVAGGYLAADLFYELYVVYACFFVVGAGAALA IPSANALGSLSVSREEQGAAAALLAVAPPSGFIFGPMIGAWLYGVNHALPLLGAATMVGALAVYAVLVTARRPLTPG
Sequences:
>Translated_397_residues MLMVGTVAVAAGMSINFVVVTPLTRKAGLSEMEVAGFMTLSTIIFAVMIPVWGRIADLVGRKRVMIFSLFATALTNMAFL FTLEAGLAGILTGASLLLTLTFVRAWFGLLAPGLQPAAMAAMTDATVPTNRAAGLGMIGAAMAIGSIIGPAGAAVLAPFG ALAPLWGTIVFCVLVGFLIAFTLPRTVKRARNAPRPRPLSLTDTRMRPHLLFLLIYFIAIGMMQQTLAWFIEDRYRLTET LGEDAGKAAVLYTGITFACYAVASLIVQFGYINRVKPDPRKVLPIGLAMVAGGYLAADLFYELYVVYACFFVVGAGAALA IPSANALGSLSVSREEQGAAAALLAVAPPSGFIFGPMIGAWLYGVNHALPLLGAATMVGALAVYAVLVTARRPLTPG >Mature_397_residues MLMVGTVAVAAGMSINFVVVTPLTRKAGLSEMEVAGFMTLSTIIFAVMIPVWGRIADLVGRKRVMIFSLFATALTNMAFL FTLEAGLAGILTGASLLLTLTFVRAWFGLLAPGLQPAAMAAMTDATVPTNRAAGLGMIGAAMAIGSIIGPAGAAVLAPFG ALAPLWGTIVFCVLVGFLIAFTLPRTVKRARNAPRPRPLSLTDTRMRPHLLFLLIYFIAIGMMQQTLAWFIEDRYRLTET LGEDAGKAAVLYTGITFACYAVASLIVQFGYINRVKPDPRKVLPIGLAMVAGGYLAADLFYELYVVYACFFVVGAGAALA IPSANALGSLSVSREEQGAAAALLAVAPPSGFIFGPMIGAWLYGVNHALPLLGAATMVGALAVYAVLVTARRPLTPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41640; Mature: 41640
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMVGTVAVAAGMSINFVVVTPLTRKAGLSEMEVAGFMTLSTIIFAVMIPVWGRIADLVG CEEEEHHHHHCCCEEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RKRVMIFSLFATALTNMAFLFTLEAGLAGILTGASLLLTLTFVRAWFGLLAPGLQPAAMA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH AMTDATVPTNRAAGLGMIGAAMAIGSIIGPAGAAVLAPFGALAPLWGTIVFCVLVGFLIA HHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTLPRTVKRARNAPRPRPLSLTDTRMRPHLLFLLIYFIAIGMMQQTLAWFIEDRYRLTET HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGEDAGKAAVLYTGITFACYAVASLIVQFGYINRVKPDPRKVLPIGLAMVAGGYLAADLF HCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH YELYVVYACFFVVGAGAALAIPSANALGSLSVSREEQGAAAALLAVAPPSGFIFGPMIGA HHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHCCCCEEEEEECCCCCCCHHHHHHH WLYGVNHALPLLGAATMVGALAVYAVLVTARRPLTPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLMVGTVAVAAGMSINFVVVTPLTRKAGLSEMEVAGFMTLSTIIFAVMIPVWGRIADLVG CEEEEHHHHHCCCEEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RKRVMIFSLFATALTNMAFLFTLEAGLAGILTGASLLLTLTFVRAWFGLLAPGLQPAAMA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH AMTDATVPTNRAAGLGMIGAAMAIGSIIGPAGAAVLAPFGALAPLWGTIVFCVLVGFLIA HHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTLPRTVKRARNAPRPRPLSLTDTRMRPHLLFLLIYFIAIGMMQQTLAWFIEDRYRLTET HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGEDAGKAAVLYTGITFACYAVASLIVQFGYINRVKPDPRKVLPIGLAMVAGGYLAADLF HCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH YELYVVYACFFVVGAGAALAIPSANALGSLSVSREEQGAAAALLAVAPPSGFIFGPMIGA HHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHCCCCEEEEEECCCCCCCHHHHHHH WLYGVNHALPLLGAATMVGALAVYAVLVTARRPLTPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA