| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800147
Identifier: 114800147
GI number: 114800147
Start: 3422336
End: 3423523
Strand: Direct
Name: 114800147
Synonym: HNE_3257
Alternate gene names: NA
Gene position: 3422336-3423523 (Clockwise)
Preceding gene: 114800188
Following gene: 114797701
Centisome position: 92.37
GC content: 66.16
Gene sequence:
>1188_bases ATGCTGGCGACCATTGCCATGGGCGCGGGCATGAGCATCAATTTCGTGGTGGTCGCCCCGCTGACGCGCAAGGCGGGCCT TGGCGAGGTGGAGGTGGCAGCGATCCTCACCCTCTCAACCCTGCTTTATGCCGTGATGATCCCCCGCTGGGGCCGGATTG CCGACCGGGTAGGCCGCAAGCGGGTGATGGTGTTCTCGCTGATCGCGATGGGGGTGACCAATATGGCGTTCCTGTTCGCG CTGGAGGCGGGGCTGGCAGGCGTGATCACCGGCACGTCGCTGATGCTGACACTGATCTTTGTGCGGCTGTGGTTCGGTCT TCTGACGCCGGGGCTTCAGCCCGCCTCGATGGCGGCAATGACGGACGCCACGACCATACGCGACCGGGCCGCCGGGCTGG GCATGCTGGGCGCAGGGATGAGCATTGGCTCGATCCTCGGGCCGGCGGGCGCCGCCGCGCTGGCGCCCTTTGGCGCGCTG GCGCCGCTCTGGGGCACGATTGTGTTCTGTATCCTGATCGGCATTCTGCTGGGCTTTTCCCTGCCCCGCACGGTGAAGCG GCCGAGGAATGCGGCGCGGCCAAAACCGCTTTCGATGTTTGATGCGCGCGTGCGCCCACACCTTCTCTTCCTGCTGTCCT ATTTCATCGGTGTGGGGATGGTTCAGCAGACGCTCGGCTGGTTCATCGAGGACCGGTATGCGCTGGCCGGGGACGACCCG GCCGCCGTGGGCCAGACAGCCGTGCTCTACACCGGGATCGTATTCTCGTGCATGGCCGTCTCCACGATCGCCGTGCAGTT TGGCTATATCTCTCGCCTGAAACCTGACCCGCGAAAGATCCTCTGGGTCGGCCTCGCGCTGGTGGCGGTAGGCTATACTG CCGCCGACGTGTTCCACGCTTTCCCTGTGCTCTGCGCCGCGTTCCTGCTGATCGGGGCGGGCTCCGCGCTCGCCATCCCT TCGGCCAATGCGCTGGGCAGTCTTTCGGTAAGCCGAGAGGAACAGGGAGCAGCCGCCGCGTTGATGTCGGCTGCGCCGCC GGCGGGGTTCATCTTCGGGCCATTAATGGGCGCCGGGCTTTACCAGGTGAACCATGCCCTGCCGCTGATCGCGTCGGCGG TGCTGGTGGGATCGCTGGCGGTCTATGCGATGCTGGTGACGGCGCGCAGGCCACTAGCCGAGGGTTAG
Upstream 100 bases:
>100_bases GACATAGCTTGTGTCCCTTCTAGGGCGCCGGGGACCACACCAAATGGACGACACCGAAACGCCGCTGCACCCGCTGTCTC CCTTCCAGCGGGGCATGCTG
Downstream 100 bases:
>100_bases CGGCTGAAAGGTTCGGCGCAGGCGGTGCCCTGTCTTGGCGAGCCGAAGAGGCCGGGCGGAAGGCGCAGCGCGCCGCCAAC AAGCTCTGCCGTACCGGTGA
Product: major facilitator family transporter
Products: NA
Alternate protein names: MFS Transporter; Facilitator Family Transporter; Facilitator Superfamily Protein; Mfs Transporter; Facilitator Superfamily Transporter; Drug Efflux Permease; Permease Of Facilitator Superfamily; MFS Superfamily Transporter
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MLATIAMGAGMSINFVVVAPLTRKAGLGEVEVAAILTLSTLLYAVMIPRWGRIADRVGRKRVMVFSLIAMGVTNMAFLFA LEAGLAGVITGTSLMLTLIFVRLWFGLLTPGLQPASMAAMTDATTIRDRAAGLGMLGAGMSIGSILGPAGAAALAPFGAL APLWGTIVFCILIGILLGFSLPRTVKRPRNAARPKPLSMFDARVRPHLLFLLSYFIGVGMVQQTLGWFIEDRYALAGDDP AAVGQTAVLYTGIVFSCMAVSTIAVQFGYISRLKPDPRKILWVGLALVAVGYTAADVFHAFPVLCAAFLLIGAGSALAIP SANALGSLSVSREEQGAAAALMSAAPPAGFIFGPLMGAGLYQVNHALPLIASAVLVGSLAVYAMLVTARRPLAEG
Sequences:
>Translated_395_residues MLATIAMGAGMSINFVVVAPLTRKAGLGEVEVAAILTLSTLLYAVMIPRWGRIADRVGRKRVMVFSLIAMGVTNMAFLFA LEAGLAGVITGTSLMLTLIFVRLWFGLLTPGLQPASMAAMTDATTIRDRAAGLGMLGAGMSIGSILGPAGAAALAPFGAL APLWGTIVFCILIGILLGFSLPRTVKRPRNAARPKPLSMFDARVRPHLLFLLSYFIGVGMVQQTLGWFIEDRYALAGDDP AAVGQTAVLYTGIVFSCMAVSTIAVQFGYISRLKPDPRKILWVGLALVAVGYTAADVFHAFPVLCAAFLLIGAGSALAIP SANALGSLSVSREEQGAAAALMSAAPPAGFIFGPLMGAGLYQVNHALPLIASAVLVGSLAVYAMLVTARRPLAEG >Mature_395_residues MLATIAMGAGMSINFVVVAPLTRKAGLGEVEVAAILTLSTLLYAVMIPRWGRIADRVGRKRVMVFSLIAMGVTNMAFLFA LEAGLAGVITGTSLMLTLIFVRLWFGLLTPGLQPASMAAMTDATTIRDRAAGLGMLGAGMSIGSILGPAGAAALAPFGAL APLWGTIVFCILIGILLGFSLPRTVKRPRNAARPKPLSMFDARVRPHLLFLLSYFIGVGMVQQTLGWFIEDRYALAGDDP AAVGQTAVLYTGIVFSCMAVSTIAVQFGYISRLKPDPRKILWVGLALVAVGYTAADVFHAFPVLCAAFLLIGAGSALAIP SANALGSLSVSREEQGAAAALMSAAPPAGFIFGPLMGAGLYQVNHALPLIASAVLVGSLAVYAMLVTARRPLAEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41065; Mature: 41065
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLATIAMGAGMSINFVVVAPLTRKAGLGEVEVAAILTLSTLLYAVMIPRWGRIADRVGRK CCEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHH RVMVFSLIAMGVTNMAFLFALEAGLAGVITGTSLMLTLIFVRLWFGLLTPGLQPASMAAM HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH TDATTIRDRAAGLGMLGAGMSIGSILGPAGAAALAPFGALAPLWGTIVFCILIGILLGFS HHHHHHHHHHHCCCHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LPRTVKRPRNAARPKPLSMFDARVRPHLLFLLSYFIGVGMVQQTLGWFIEDRYALAGDDP CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCC AAVGQTAVLYTGIVFSCMAVSTIAVQFGYISRLKPDPRKILWVGLALVAVGYTAADVFHA HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FPVLCAAFLLIGAGSALAIPSANALGSLSVSREEQGAAAALMSAAPPAGFIFGPLMGAGL HHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCHH YQVNHALPLIASAVLVGSLAVYAMLVTARRPLAEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLATIAMGAGMSINFVVVAPLTRKAGLGEVEVAAILTLSTLLYAVMIPRWGRIADRVGRK CCEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHH RVMVFSLIAMGVTNMAFLFALEAGLAGVITGTSLMLTLIFVRLWFGLLTPGLQPASMAAM HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH TDATTIRDRAAGLGMLGAGMSIGSILGPAGAAALAPFGALAPLWGTIVFCILIGILLGFS HHHHHHHHHHHCCCHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LPRTVKRPRNAARPKPLSMFDARVRPHLLFLLSYFIGVGMVQQTLGWFIEDRYALAGDDP CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCC AAVGQTAVLYTGIVFSCMAVSTIAVQFGYISRLKPDPRKILWVGLALVAVGYTAADVFHA HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FPVLCAAFLLIGAGSALAIPSANALGSLSVSREEQGAAAALMSAAPPAGFIFGPLMGAGL HHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCHH YQVNHALPLIASAVLVGSLAVYAMLVTARRPLAEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA