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The map label for this gene is ydiF [H]

Identifier: 114800145

GI number: 114800145

Start: 965497

End: 967080

Strand: Direct

Name: ydiF [H]

Synonym: HNE_0950

Alternate gene names: 114800145

Gene position: 965497-967080 (Clockwise)

Preceding gene: 114797249

Following gene: 114797477

Centisome position: 26.06

GC content: 66.22

Gene sequence:

>1584_bases
ATGCCTGCTGCCATTACCCTCTCCTCGCTGACATTTGCCCTGCCTGACGGCCGGGTTCTTTTTTCAGACCTTAACTTCAG
TTTCAATCAGGAACGTATCGGCCTCATCGGGCGGAACGGCATCGGCAAGTCTAGCCTGCTGGCGTTGATCGCCGGCGCGC
AGCGGCCCACGTCCGGAGCCATCCGGGTGAGCGGCACGCTCGGAACCCTGCACCAGTCGTTCGCGCCGGAGCCGGGCGAA
ACCCTCGCCAGCCTGTTCGGCGTGGGCGCCGCGCTTGAGCGGCTGGCCCGCATAGAGGCAGGGGCGGGAACCGAAACTGA
TTTTGATGACGCGGACTGGACCCTGGAGGCGCGCCTGGCTGAAGCGTTGGCGCGGGCGGGGCTGGCGGATGTTTCCCTCA
GCACATCGCTGGCCACGCTATCGGGCGGGCAGCGCACGCGGGCGAGCCTTGCAGCGCTGATCTTTGCCGAGCCGGATTTC
CTGCTGCTGGATGAACCCACCAACAATCTCGACCGGGAGGGGCGCGCCGCGGTCGCGCGGCTCCTGTCTACCTGGCGCGG
CGGGGCGGTGGTTGTCAGCCACGACCGGGAACTGCTGGAAAACATGGACGCGATTGTCGAGCTGACGTCATTGGGCGCGG
CACGCTATGGCGGGGGCTGGAGCAGCTATGAGGCGCAAAAAGCGCTCGAGCTGGCGGCGGCCGAGCAGGATCTGGCGCAG
GCCCAGCGCCGCGTTGAGGAGGCCGGCGAGAAGGCGCAGGCCGCCTCAGAGCGCAAGGCAAGGCGCGACGGCGCCGGCAG
CCGGCAGGCGGCAAAGGGCGGCGCGCCGCGCATATTGCTCGGTACACTGAAGGGCCGGGCAGAAGAGTCTTCCGGCGCGC
TGAACCGCCTGGCCGAAAAGCAGAAGGCCGAGGCCGAAGAGGCCGCCGCAACCGCCCGAACCAAGCTCGAAGTGCTTCAG
CCCTTCATTGTCAGGATACCGCCATCCCGCCTTCCGGCAGGCAAGGCCGTGCTGACCGCCGCGCAGCTTTGCGCAGGATA
TGACCCCGAAGCGCCGCTCCTGCGCGACCTGTCTTTTGAGCTGCGCGGGCCAGAGCGTGTGGCGATCGTAGGCCCCAACG
GCTCTGGCAAATCCACGCTGCTGGCAACGCTCACCGGGGCGTTGCCGCCGCTGGCGGGAGAGGCGCAGATTCAGGTTCCC
AGTGTGATGCTCGACCAAGAGGTCAGCATCCTGGAGGGCGCACACACAATCCTGGAAAACTTCCAGAGACTCAATCCGGA
GGCGGATGAAAATGCGTGCCGTGCCGCGTTGGCGCGCTTCCGATTCCGGGCGGACGCTGCGTTACAGGTTGTGTCCACGC
TCAGCGGCGGGGAGCGTCTGCGTGCGGGGCTCGCCTGCGTTTTGGGTGGGGGCACACCGCCTCAACTGCTCATTCTGGAC
GAGCCGACCAACCACCTGGACATTGCATCACTGGAAACGGTAGAGGCTGGCCTCAATGCCTATGATGGCGCCCTGTTGAT
TGTCAGCCACGACGAAGCGTTCCTGGGGCGCATCGGCATCACACGCCGGATCAGCCTCAGATAA

Upstream 100 bases:

>100_bases
GCTGGCAGAAAATTATACCCGTAAGCATAAGGCGCCTTTGTCATGAACAATATCCGGAAAATGACCGCCCTCGGATCAGT
TTACCAGATGAGTTCAAACC

Downstream 100 bases:

>100_bases
GGCCCGAGGTGCGAAAGCTGACAACGCCGGAGGTGCCGACCACCAGATGATCGTGTACGGTAATGTCAAATGGCCCAGGC
ACATCAATGATCTCGCGTGT

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 526

Protein sequence:

>527_residues
MPAAITLSSLTFALPDGRVLFSDLNFSFNQERIGLIGRNGIGKSSLLALIAGAQRPTSGAIRVSGTLGTLHQSFAPEPGE
TLASLFGVGAALERLARIEAGAGTETDFDDADWTLEARLAEALARAGLADVSLSTSLATLSGGQRTRASLAALIFAEPDF
LLLDEPTNNLDREGRAAVARLLSTWRGGAVVVSHDRELLENMDAIVELTSLGAARYGGGWSSYEAQKALELAAAEQDLAQ
AQRRVEEAGEKAQAASERKARRDGAGSRQAAKGGAPRILLGTLKGRAEESSGALNRLAEKQKAEAEEAAATARTKLEVLQ
PFIVRIPPSRLPAGKAVLTAAQLCAGYDPEAPLLRDLSFELRGPERVAIVGPNGSGKSTLLATLTGALPPLAGEAQIQVP
SVMLDQEVSILEGAHTILENFQRLNPEADENACRAALARFRFRADAALQVVSTLSGGERLRAGLACVLGGGTPPQLLILD
EPTNHLDIASLETVEAGLNAYDGALLIVSHDEAFLGRIGITRRISLR

Sequences:

>Translated_527_residues
MPAAITLSSLTFALPDGRVLFSDLNFSFNQERIGLIGRNGIGKSSLLALIAGAQRPTSGAIRVSGTLGTLHQSFAPEPGE
TLASLFGVGAALERLARIEAGAGTETDFDDADWTLEARLAEALARAGLADVSLSTSLATLSGGQRTRASLAALIFAEPDF
LLLDEPTNNLDREGRAAVARLLSTWRGGAVVVSHDRELLENMDAIVELTSLGAARYGGGWSSYEAQKALELAAAEQDLAQ
AQRRVEEAGEKAQAASERKARRDGAGSRQAAKGGAPRILLGTLKGRAEESSGALNRLAEKQKAEAEEAAATARTKLEVLQ
PFIVRIPPSRLPAGKAVLTAAQLCAGYDPEAPLLRDLSFELRGPERVAIVGPNGSGKSTLLATLTGALPPLAGEAQIQVP
SVMLDQEVSILEGAHTILENFQRLNPEADENACRAALARFRFRADAALQVVSTLSGGERLRAGLACVLGGGTPPQLLILD
EPTNHLDIASLETVEAGLNAYDGALLIVSHDEAFLGRIGITRRISLR
>Mature_526_residues
PAAITLSSLTFALPDGRVLFSDLNFSFNQERIGLIGRNGIGKSSLLALIAGAQRPTSGAIRVSGTLGTLHQSFAPEPGET
LASLFGVGAALERLARIEAGAGTETDFDDADWTLEARLAEALARAGLADVSLSTSLATLSGGQRTRASLAALIFAEPDFL
LLDEPTNNLDREGRAAVARLLSTWRGGAVVVSHDRELLENMDAIVELTSLGAARYGGGWSSYEAQKALELAAAEQDLAQA
QRRVEEAGEKAQAASERKARRDGAGSRQAAKGGAPRILLGTLKGRAEESSGALNRLAEKQKAEAEEAAATARTKLEVLQP
FIVRIPPSRLPAGKAVLTAAQLCAGYDPEAPLLRDLSFELRGPERVAIVGPNGSGKSTLLATLTGALPPLAGEAQIQVPS
VMLDQEVSILEGAHTILENFQRLNPEADENACRAALARFRFRADAALQVVSTLSGGERLRAGLACVLGGGTPPQLLILDE
PTNHLDIASLETVEAGLNAYDGALLIVSHDEAFLGRIGITRRISLR

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=527, Percent_Identity=28.6527514231499, Blast_Score=156, Evalue=4e-38,
Organism=Homo sapiens, GI10947137, Length=540, Percent_Identity=28.1481481481481, Blast_Score=143, Evalue=5e-34,
Organism=Homo sapiens, GI27881506, Length=533, Percent_Identity=28.5178236397749, Blast_Score=142, Evalue=6e-34,
Organism=Homo sapiens, GI10947135, Length=516, Percent_Identity=30.0387596899225, Blast_Score=135, Evalue=1e-31,
Organism=Homo sapiens, GI69354671, Length=516, Percent_Identity=30.0387596899225, Blast_Score=135, Evalue=1e-31,
Organism=Escherichia coli, GI2367384, Length=546, Percent_Identity=30.952380952381, Blast_Score=179, Evalue=5e-46,
Organism=Escherichia coli, GI1787041, Length=522, Percent_Identity=30.0766283524904, Blast_Score=177, Evalue=2e-45,
Organism=Escherichia coli, GI1789751, Length=517, Percent_Identity=28.0464216634429, Blast_Score=174, Evalue=2e-44,
Organism=Escherichia coli, GI1787182, Length=524, Percent_Identity=29.1984732824427, Blast_Score=161, Evalue=9e-41,
Organism=Escherichia coli, GI1790467, Length=240, Percent_Identity=31.25, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87081709, Length=193, Percent_Identity=27.979274611399, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI87081791, Length=198, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1786345, Length=207, Percent_Identity=31.8840579710145, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1788761, Length=183, Percent_Identity=31.6939890710383, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1788165, Length=204, Percent_Identity=27.4509803921569, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87081834, Length=227, Percent_Identity=29.5154185022026, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1787758, Length=187, Percent_Identity=28.3422459893048, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=525, Percent_Identity=27.8095238095238, Blast_Score=155, Evalue=6e-38,
Organism=Caenorhabditis elegans, GI17553372, Length=543, Percent_Identity=28.5451197053407, Blast_Score=154, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17555318, Length=540, Percent_Identity=26.4814814814815, Blast_Score=149, Evalue=2e-36,
Organism=Saccharomyces cerevisiae, GI6320874, Length=548, Percent_Identity=26.2773722627737, Blast_Score=153, Evalue=5e-38,
Organism=Saccharomyces cerevisiae, GI6321121, Length=556, Percent_Identity=25.8992805755396, Blast_Score=137, Evalue=4e-33,
Organism=Saccharomyces cerevisiae, GI6323278, Length=223, Percent_Identity=26.457399103139, Blast_Score=72, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6324314, Length=171, Percent_Identity=28.6549707602339, Blast_Score=69, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6325030, Length=230, Percent_Identity=28.2608695652174, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24666836, Length=529, Percent_Identity=28.5444234404537, Blast_Score=169, Evalue=6e-42,
Organism=Drosophila melanogaster, GI24641342, Length=520, Percent_Identity=28.4615384615385, Blast_Score=160, Evalue=2e-39,
Organism=Drosophila melanogaster, GI24642252, Length=533, Percent_Identity=27.7673545966229, Blast_Score=149, Evalue=4e-36,
Organism=Drosophila melanogaster, GI18859989, Length=533, Percent_Identity=27.7673545966229, Blast_Score=149, Evalue=4e-36,
Organism=Drosophila melanogaster, GI24648279, Length=267, Percent_Identity=27.3408239700375, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 55373; Mature: 55242

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAAITLSSLTFALPDGRVLFSDLNFSFNQERIGLIGRNGIGKSSLLALIAGAQRPTSGA
CCCEEEECCEEEECCCCCEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCC
IRVSGTLGTLHQSFAPEPGETLASLFGVGAALERLARIEAGAGTETDFDDADWTLEARLA
EEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
EALARAGLADVSLSTSLATLSGGQRTRASLAALIFAEPDFLLLDEPTNNLDREGRAAVAR
HHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHEEEEECCCEEEEECCCCCCCCCHHHHHHH
LLSTWRGGAVVVSHDRELLENMDAIVELTSLGAARYGGGWSSYEAQKALELAAAEQDLAQ
HHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHH
AQRRVEEAGEKAQAASERKARRDGAGSRQAAKGGAPRILLGTLKGRAEESSGALNRLAEK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHH
QKAEAEEAAATARTKLEVLQPFIVRIPPSRLPAGKAVLTAAQLCAGYDPEAPLLRDLSFE
HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCE
LRGPERVAIVGPNGSGKSTLLATLTGALPPLAGEAQIQVPSVMLDQEVSILEGAHTILEN
ECCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEECCHHHHCCHHHHHHHHHHHHHH
FQRLNPEADENACRAALARFRFRADAALQVVSTLSGGERLRAGLACVLGGGTPPQLLILD
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCEEEEECCCCCCEEEEEE
EPTNHLDIASLETVEAGLNAYDGALLIVSHDEAFLGRIGITRRISLR
CCCCCEECHHHHHHHHCCCCCCCEEEEEECCHHHHHHCCCCEEEECC
>Mature Secondary Structure 
PAAITLSSLTFALPDGRVLFSDLNFSFNQERIGLIGRNGIGKSSLLALIAGAQRPTSGA
CCEEEECCEEEECCCCCEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCC
IRVSGTLGTLHQSFAPEPGETLASLFGVGAALERLARIEAGAGTETDFDDADWTLEARLA
EEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
EALARAGLADVSLSTSLATLSGGQRTRASLAALIFAEPDFLLLDEPTNNLDREGRAAVAR
HHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHEEEEECCCEEEEECCCCCCCCCHHHHHHH
LLSTWRGGAVVVSHDRELLENMDAIVELTSLGAARYGGGWSSYEAQKALELAAAEQDLAQ
HHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHH
AQRRVEEAGEKAQAASERKARRDGAGSRQAAKGGAPRILLGTLKGRAEESSGALNRLAEK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHH
QKAEAEEAAATARTKLEVLQPFIVRIPPSRLPAGKAVLTAAQLCAGYDPEAPLLRDLSFE
HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCE
LRGPERVAIVGPNGSGKSTLLATLTGALPPLAGEAQIQVPSVMLDQEVSILEGAHTILEN
ECCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEECCHHHHCCHHHHHHHHHHHHHH
FQRLNPEADENACRAALARFRFRADAALQVVSTLSGGERLRAGLACVLGGGTPPQLLILD
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCEEEEECCCCCCEEEEEE
EPTNHLDIASLETVEAGLNAYDGALLIVSHDEAFLGRIGITRRISLR
CCCCCEECHHHHHHHHCCCCCCCEEEEEECCHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]