| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800140
Identifier: 114800140
GI number: 114800140
Start: 3594475
End: 3595182
Strand: Direct
Name: 114800140
Synonym: HNE_3458
Alternate gene names: NA
Gene position: 3594475-3595182 (Clockwise)
Preceding gene: 114800282
Following gene: 114800379
Centisome position: 97.02
GC content: 63.28
Gene sequence:
>708_bases ATGACACGCGCCGTCAGCGCAATCCTTGGCGGTATCAGGGATGTTGCCTCCGGACGGCTCACCCTGTTTGCCATACTCAA CCTGATCCTGGCCCTGGCGCTCACCGGTGGCAGCGCCCTGGCGGTCATCCGGTATGGCGTGCCGCTTATTCCTGAAGGCG ATGGCTGGCTCAGCTATCTGTCCACAGCCGGGGAAATCGCCGCCAGCCTGATACTGATTGTGCTGGCTTTGGCCCTCTCG CCTGCCGCGTCCATATTTGTCGGAGGGTTCCTGTTCGATTTTGCTGCCGAGCGGGTCGAAAAAGCGATCGGGGCGCCCAA GGCTCGCGCCGTCCCGCTGACAGAAGGCGTCATCAACGGGCTGAAGATCGCGCTGCCCGCCCTACTTCTGAATCTTCTGG TGATCCCGCTCTATTTCGTTCCGGTGGTGAACGTCGTTGTGTTTGTCGTCCTGAATGGCGCCCTGATGGGACGGGAATAT GCAACGCTGGCGGCGGCGCGCCAGATGAGCTTCAAGGAGGCTGTGCGCCTGCGCAACCGGCATGGCGCCTCTGTCTTTCT CGTTGGGCTCGCCTGCTCGGTCATCCCGTTCTTCGCGCCGCTCGTGGGCGCCGGCGCCATGGTCCGGCTGGTTCAGAAAC TGCCGCGACCCGATGCAGCAGGGCGCAGCGCCCCCGAGCGCACTACTATCAAGGCCGACAAGCACTGA
Upstream 100 bases:
>100_bases CCCCCGCGTCCAGCGCAGACCAGCGCGCCGCCGCGCTTGTCACCGCAATGGCCGCCAAGGTGGAGGCCCTGGCCGCCCGG CTGGAAAGTGGCGGAAACGC
Downstream 100 bases:
>100_bases AAGGCGACACGCCATGCAACAACTCCTGACTATCGGCTTCTATGTCGCGCTGGCGGCTGTCGCGGTGGTTCTGATCATCG GCATTGCCAATCTGGCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MTRAVSAILGGIRDVASGRLTLFAILNLILALALTGGSALAVIRYGVPLIPEGDGWLSYLSTAGEIAASLILIVLALALS PAASIFVGGFLFDFAAERVEKAIGAPKARAVPLTEGVINGLKIALPALLLNLLVIPLYFVPVVNVVVFVVLNGALMGREY ATLAAARQMSFKEAVRLRNRHGASVFLVGLACSVIPFFAPLVGAGAMVRLVQKLPRPDAAGRSAPERTTIKADKH
Sequences:
>Translated_235_residues MTRAVSAILGGIRDVASGRLTLFAILNLILALALTGGSALAVIRYGVPLIPEGDGWLSYLSTAGEIAASLILIVLALALS PAASIFVGGFLFDFAAERVEKAIGAPKARAVPLTEGVINGLKIALPALLLNLLVIPLYFVPVVNVVVFVVLNGALMGREY ATLAAARQMSFKEAVRLRNRHGASVFLVGLACSVIPFFAPLVGAGAMVRLVQKLPRPDAAGRSAPERTTIKADKH >Mature_234_residues TRAVSAILGGIRDVASGRLTLFAILNLILALALTGGSALAVIRYGVPLIPEGDGWLSYLSTAGEIAASLILIVLALALSP AASIFVGGFLFDFAAERVEKAIGAPKARAVPLTEGVINGLKIALPALLLNLLVIPLYFVPVVNVVVFVVLNGALMGREYA TLAAARQMSFKEAVRLRNRHGASVFLVGLACSVIPFFAPLVGAGAMVRLVQKLPRPDAAGRSAPERTTIKADKH
Specific function: Unknown
COG id: COG2981
COG function: function code E; Uncharacterized protein involved in cysteine biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24546; Mature: 24414
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRAVSAILGGIRDVASGRLTLFAILNLILALALTGGSALAVIRYGVPLIPEGDGWLSYL CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHH STAGEIAASLILIVLALALSPAASIFVGGFLFDFAAERVEKAIGAPKARAVPLTEGVING HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH LKIALPALLLNLLVIPLYFVPVVNVVVFVVLNGALMGREYATLAAARQMSFKEAVRLRNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HGASVFLVGLACSVIPFFAPLVGAGAMVRLVQKLPRPDAAGRSAPERTTIKADKH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TRAVSAILGGIRDVASGRLTLFAILNLILALALTGGSALAVIRYGVPLIPEGDGWLSYL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHH STAGEIAASLILIVLALALSPAASIFVGGFLFDFAAERVEKAIGAPKARAVPLTEGVING HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH LKIALPALLLNLLVIPLYFVPVVNVVVFVVLNGALMGREYATLAAARQMSFKEAVRLRNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HGASVFLVGLACSVIPFFAPLVGAGAMVRLVQKLPRPDAAGRSAPERTTIKADKH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA