| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800115
Identifier: 114800115
GI number: 114800115
Start: 1295740
End: 1297101
Strand: Direct
Name: 114800115
Synonym: HNE_1268
Alternate gene names: NA
Gene position: 1295740-1297101 (Clockwise)
Preceding gene: 114800472
Following gene: 114797572
Centisome position: 34.97
GC content: 64.9
Gene sequence:
>1362_bases TTGAAAAACGACATCAAAATCAAGCGGCCCGCGAGCGCGCGCCAGTTGCACCGTCAGATCGGGTGGGTGGCCGCCTTTGT GGCTATGGCCTGGGCAATCACCGGTTTTCTACATCCTGTGATGAGCTGGACCGCGCCGCGCCCGGCCGTTCAGGCGCCGC CAAATCCGGGACAAATCGGGACACTTCCGGGCCATTCGCTGGCCACTATGCTGACAAAAGCAGGACAAACCGGGACACAT CAGGTCAGGCTCGTGACATTTGGGAACCGCTCCTACTGGTTTTCCAGTTTTCCCGGCGAGCCCCGAAAAGGCGTGGTCGA CGCTCTGACCGGCGTGGCGGCGCCCGAGGTAGAAAATGACCACGCCATCGCCCTGGCCCGGCATTATGCGGCGCTGCCTG AGGCGGATATCCGGTCTGTGGAAATCGTCGACCGGTTCTCGACCGAGTATCCGGAAATCAACCGGCTGTTGCCGGTGTGG CGGGTGGCGTTCGACACGCCGGAAGGGCTGGCAGTCTACGTGGATACCGGGGCTGACCGGCTGGCGGCGGTGACCGATGG GCGGCGGCGGGCGCTGCTGTTTGTGTTTCAGAATGTGCATACGCTGAAATTCCTGAGCTTTGCCGAGCCGCTGCGCGTGG CGGTTCTGGCGGGGCTGATCCTCAGCGTGATTGCGACGAGCCTGATCGGGGCAACACTGCTGTTGAAGGCGAAGGGGCGG GGCTTGCGCAAGGCGCACACGCTGGCGGCGTGGGTAGCGCTGCCCTTCATTCTGACGTTCACGCTGTCGGGGATGCTTCA CCTGCTGGTGACGATGGGGCCGGGGAAAGTGCTGCCACCGCCGGGGGTGTTCAATGTGGCGGATCTGGATACGCCGAGGC CTGGCCCCGGATCGCTCTATGGGATGACGGCGACGGCGGGGCCGGATGGCAAACCCGTCTGGCGGATCGAGACGGCGGGC GGCATTGCGTATCAAGGGCAGGCGGCGGGTTATTCCGATGCCGACCGGGCACGGGCGATTGCTGGGGCAGCAGCCGATGC GGAGGTGTCTCTCGTGACCCGGTTTGGCCGCGAATACAGCTTTGCCAACAAGCGCCTGCCGGTGCTGAAAGTGGCGGGCG CGAACGGGCCGGTTTTCGTGGATGTGCGCGAGGGGCTGATTGCGGCGGCGCCGGAGAAGACCGCGCTGCAGGCCGCCGAA GGGTGGAGCTTTGATGTTCTGCACAAATGGGAACTGCTGCGGCCCATCGGGACGCGGAACCGGGACTATCTGCTTATGAC TACGGTTGCGGTGATCTTCCTGACGGCGGCGCTGGGACTGGCGATCCAGCTGTGGCGGCGGCGGAAGCAGCCGGGCGGCT GA
Upstream 100 bases:
>100_bases TATCCGACGGGGCCGCCCGCTTCTCTCTGAGACGTTCAGCGTTGCGGCGTGCCCCTTGGGCGCGGCCCGGATTCTGCCCT TCTTTCTCAGAGACAAGACC
Downstream 100 bases:
>100_bases TTTCGCTTGCTTGCCTCAAGGTCAGCTAGGGCCGATTACGTATTCACCTGCCTTCCTCCCAGGGCAAAATTTGCAAGCAA GTTTGAGGGCTCCGCGACAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MKNDIKIKRPASARQLHRQIGWVAAFVAMAWAITGFLHPVMSWTAPRPAVQAPPNPGQIGTLPGHSLATMLTKAGQTGTH QVRLVTFGNRSYWFSSFPGEPRKGVVDALTGVAAPEVENDHAIALARHYAALPEADIRSVEIVDRFSTEYPEINRLLPVW RVAFDTPEGLAVYVDTGADRLAAVTDGRRRALLFVFQNVHTLKFLSFAEPLRVAVLAGLILSVIATSLIGATLLLKAKGR GLRKAHTLAAWVALPFILTFTLSGMLHLLVTMGPGKVLPPPGVFNVADLDTPRPGPGSLYGMTATAGPDGKPVWRIETAG GIAYQGQAAGYSDADRARAIAGAAADAEVSLVTRFGREYSFANKRLPVLKVAGANGPVFVDVREGLIAAAPEKTALQAAE GWSFDVLHKWELLRPIGTRNRDYLLMTTVAVIFLTAALGLAIQLWRRRKQPGG
Sequences:
>Translated_453_residues MKNDIKIKRPASARQLHRQIGWVAAFVAMAWAITGFLHPVMSWTAPRPAVQAPPNPGQIGTLPGHSLATMLTKAGQTGTH QVRLVTFGNRSYWFSSFPGEPRKGVVDALTGVAAPEVENDHAIALARHYAALPEADIRSVEIVDRFSTEYPEINRLLPVW RVAFDTPEGLAVYVDTGADRLAAVTDGRRRALLFVFQNVHTLKFLSFAEPLRVAVLAGLILSVIATSLIGATLLLKAKGR GLRKAHTLAAWVALPFILTFTLSGMLHLLVTMGPGKVLPPPGVFNVADLDTPRPGPGSLYGMTATAGPDGKPVWRIETAG GIAYQGQAAGYSDADRARAIAGAAADAEVSLVTRFGREYSFANKRLPVLKVAGANGPVFVDVREGLIAAAPEKTALQAAE GWSFDVLHKWELLRPIGTRNRDYLLMTTVAVIFLTAALGLAIQLWRRRKQPGG >Mature_453_residues MKNDIKIKRPASARQLHRQIGWVAAFVAMAWAITGFLHPVMSWTAPRPAVQAPPNPGQIGTLPGHSLATMLTKAGQTGTH QVRLVTFGNRSYWFSSFPGEPRKGVVDALTGVAAPEVENDHAIALARHYAALPEADIRSVEIVDRFSTEYPEINRLLPVW RVAFDTPEGLAVYVDTGADRLAAVTDGRRRALLFVFQNVHTLKFLSFAEPLRVAVLAGLILSVIATSLIGATLLLKAKGR GLRKAHTLAAWVALPFILTFTLSGMLHLLVTMGPGKVLPPPGVFNVADLDTPRPGPGSLYGMTATAGPDGKPVWRIETAG GIAYQGQAAGYSDADRARAIAGAAADAEVSLVTRFGREYSFANKRLPVLKVAGANGPVFVDVREGLIAAAPEKTALQAAE GWSFDVLHKWELLRPIGTRNRDYLLMTTVAVIFLTAALGLAIQLWRRRKQPGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48759; Mature: 48759
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNDIKIKRPASARQLHRQIGWVAAFVAMAWAITGFLHPVMSWTAPRPAVQAPPNPGQIG CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC TLPGHSLATMLTKAGQTGTHQVRLVTFGNRSYWFSSFPGEPRKGVVDALTGVAAPEVEND CCCCHHHHHHHHHCCCCCCEEEEEEEECCCCEEECCCCCCCCCHHHHHHHCCCCCCCCCC HAIALARHYAALPEADIRSVEIVDRFSTEYPEINRLLPVWRVAFDTPEGLAVYVDTGADR CHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCEEEEEECCCCC LAAVTDGRRRALLFVFQNVHTLKFLSFAEPLRVAVLAGLILSVIATSLIGATLLLKAKGR EEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC GLRKAHTLAAWVALPFILTFTLSGMLHLLVTMGPGKVLPPPGVFNVADLDTPRPGPGSLY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCEE GMTATAGPDGKPVWRIETAGGIAYQGQAAGYSDADRARAIAGAAADAEVSLVTRFGREYS EEEEECCCCCCEEEEEECCCCEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCHHH FANKRLPVLKVAGANGPVFVDVREGLIAAAPEKTALQAAEGWSFDVLHKWELLRPIGTRN HCCCCCCEEEEECCCCCEEEEECCCEEECCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCC RDYLLMTTVAVIFLTAALGLAIQLWRRRKQPGG CCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKNDIKIKRPASARQLHRQIGWVAAFVAMAWAITGFLHPVMSWTAPRPAVQAPPNPGQIG CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC TLPGHSLATMLTKAGQTGTHQVRLVTFGNRSYWFSSFPGEPRKGVVDALTGVAAPEVEND CCCCHHHHHHHHHCCCCCCEEEEEEEECCCCEEECCCCCCCCCHHHHHHHCCCCCCCCCC HAIALARHYAALPEADIRSVEIVDRFSTEYPEINRLLPVWRVAFDTPEGLAVYVDTGADR CHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCEEEEEECCCCC LAAVTDGRRRALLFVFQNVHTLKFLSFAEPLRVAVLAGLILSVIATSLIGATLLLKAKGR EEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC GLRKAHTLAAWVALPFILTFTLSGMLHLLVTMGPGKVLPPPGVFNVADLDTPRPGPGSLY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCEE GMTATAGPDGKPVWRIETAGGIAYQGQAAGYSDADRARAIAGAAADAEVSLVTRFGREYS EEEEECCCCCCEEEEEECCCCEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCHHH FANKRLPVLKVAGANGPVFVDVREGLIAAAPEKTALQAAEGWSFDVLHKWELLRPIGTRN HCCCCCCEEEEECCCCCEEEEECCCEEECCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCC RDYLLMTTVAVIFLTAALGLAIQLWRRRKQPGG CCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA