| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800085
Identifier: 114800085
GI number: 114800085
Start: 2987157
End: 2988221
Strand: Reverse
Name: 114800085
Synonym: HNE_2824
Alternate gene names: NA
Gene position: 2988221-2987157 (Counterclockwise)
Preceding gene: 114799107
Following gene: 114799134
Centisome position: 80.65
GC content: 70.14
Gene sequence:
>1065_bases ATGGGCACGCCCATGACCCTGCAGGTGTTCCTGGCTGATGGCCGGGCGCAGCCGGTCACGCCCCTCATGGCATTCCTTGC CGGGGCACACGCTGATGCCATGGCCCGCATCTGGCCCGCGCCGCATGAGGATTTCCTCCTGCTGCCGGCCGCGCGCCGTC ACGCCGCCATCCTCCTCGCCCTGCGGGGCGGGTACAGCGCGCAGCGTCTGCAATGGCTCGCCGCCCGCGCGCGGGATGGG GAGCTGGCCGCAGAAATCCTCGGCGATCATCCGCCCGGCGGCGTGATGAAAGCGCTCGGCCGCATGGGTGAAATCCTGTG GCCGGGGGAGGCGTACCGCGTCTTCACTGATCTCTTCCGGGAAGAGGCCGCGCGCCAGCTCATCCGCCACATGCCAGCGC TTCACCCCGGCGTGCTCGCCATCATCAGCCTGCTGCCGATCCGGCTGCGTCAGGCAAATGTGGTCAGCCTTCTGGGAACG GAGCGTGCGGCTGCGGCAGATCTTGCGGCGGCGTTTGCCATGGCCCTGCGCGTGCGGGGTGAGGCCGCCGCCGGCGACAT CGCGCAGCGTTTCGGCCGGGCGAAAACCTGGGCGGCGCTGTTCGAAACCGCCGTTCAGGTCGTCCAACCGCTCGAGTTCG CGACGGTGCTGACCCCGCCGGATCTGCCTGCGCCCTTCGTCCCGGTACGGCGTTTCGAGATGCTGTCGAAAACAGCGCTC GAATTCCGTAACTGCCTGCGCGACTATGCGGCAGATCTTGCCGCAGGCAATATGACGGTCTGGGTCTGGCGGGGGGAAGG CGGACCCGCCGCGATTGCGCTGCGGCGGGACGCGGCAGGCTGGCGCCTCGCCGAAGCCCGCGGCCGGGACAATGCCGATC TGTCCGACGCGGCATTGATGGAAGTTGCCGCCGCCGTCCGCGCCGCCGGGGTGCGCACCGGAGAGGCCTGGTCGGCGCTC TACCGGCGCCTGCAAGACTGGGTGCATGAAGATCCCGCCGGCCGCGCGCCAGCTAGCGCGCCCACCTGGCGGGAACAGCT CGGCCTCGGCTGTCTGTGGGACTGA
Upstream 100 bases:
>100_bases CGCGCGTTTGCCGGTGGCTGACTGACCTCGCATGAGTTGATCTGACCCTTGCCCGGCGCGCCAAAGGTGCGCCTACGGCA TATTCAGAAGGAGGTGGATC
Downstream 100 bases:
>100_bases TGCGGGCAAGGGCGCCCCGGCCAGGAACGGCTCGGGCGCCCTTGCTTTGCAGCCGCCCCGATCCGGGTTAGTCTCCTGTC AGGGAACAAGGAGGAAACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MGTPMTLQVFLADGRAQPVTPLMAFLAGAHADAMARIWPAPHEDFLLLPAARRHAAILLALRGGYSAQRLQWLAARARDG ELAAEILGDHPPGGVMKALGRMGEILWPGEAYRVFTDLFREEAARQLIRHMPALHPGVLAIISLLPIRLRQANVVSLLGT ERAAAADLAAAFAMALRVRGEAAAGDIAQRFGRAKTWAALFETAVQVVQPLEFATVLTPPDLPAPFVPVRRFEMLSKTAL EFRNCLRDYAADLAAGNMTVWVWRGEGGPAAIALRRDAAGWRLAEARGRDNADLSDAALMEVAAAVRAAGVRTGEAWSAL YRRLQDWVHEDPAGRAPASAPTWREQLGLGCLWD
Sequences:
>Translated_354_residues MGTPMTLQVFLADGRAQPVTPLMAFLAGAHADAMARIWPAPHEDFLLLPAARRHAAILLALRGGYSAQRLQWLAARARDG ELAAEILGDHPPGGVMKALGRMGEILWPGEAYRVFTDLFREEAARQLIRHMPALHPGVLAIISLLPIRLRQANVVSLLGT ERAAAADLAAAFAMALRVRGEAAAGDIAQRFGRAKTWAALFETAVQVVQPLEFATVLTPPDLPAPFVPVRRFEMLSKTAL EFRNCLRDYAADLAAGNMTVWVWRGEGGPAAIALRRDAAGWRLAEARGRDNADLSDAALMEVAAAVRAAGVRTGEAWSAL YRRLQDWVHEDPAGRAPASAPTWREQLGLGCLWD >Mature_353_residues GTPMTLQVFLADGRAQPVTPLMAFLAGAHADAMARIWPAPHEDFLLLPAARRHAAILLALRGGYSAQRLQWLAARARDGE LAAEILGDHPPGGVMKALGRMGEILWPGEAYRVFTDLFREEAARQLIRHMPALHPGVLAIISLLPIRLRQANVVSLLGTE RAAAADLAAAFAMALRVRGEAAAGDIAQRFGRAKTWAALFETAVQVVQPLEFATVLTPPDLPAPFVPVRRFEMLSKTALE FRNCLRDYAADLAAGNMTVWVWRGEGGPAAIALRRDAAGWRLAEARGRDNADLSDAALMEVAAAVRAAGVRTGEAWSALY RRLQDWVHEDPAGRAPASAPTWREQLGLGCLWD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38362; Mature: 38231
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTPMTLQVFLADGRAQPVTPLMAFLAGAHADAMARIWPAPHEDFLLLPAARRHAAILLA CCCCEEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCEEEECCCCCCEEEEEE LRGGYSAQRLQWLAARARDGELAAEILGDHPPGGVMKALGRMGEILWPGEAYRVFTDLFR ECCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHH EEAARQLIRHMPALHPGVLAIISLLPIRLRQANVVSLLGTERAAAADLAAAFAMALRVRG HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC EAAAGDIAQRFGRAKTWAALFETAVQVVQPLEFATVLTPPDLPAPFVPVRRFEMLSKTAL CHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHEEECCCCCCCCCCHHHHHHHHHHHHH EFRNCLRDYAADLAAGNMTVWVWRGEGGPAAIALRRDAAGWRLAEARGRDNADLSDAALM HHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCEEHHHCCCCCCCCHHHHHH EVAAAVRAAGVRTGEAWSALYRRLQDWVHEDPAGRAPASAPTWREQLGLGCLWD HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCC >Mature Secondary Structure GTPMTLQVFLADGRAQPVTPLMAFLAGAHADAMARIWPAPHEDFLLLPAARRHAAILLA CCCEEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCEEEECCCCCCEEEEEE LRGGYSAQRLQWLAARARDGELAAEILGDHPPGGVMKALGRMGEILWPGEAYRVFTDLFR ECCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHH EEAARQLIRHMPALHPGVLAIISLLPIRLRQANVVSLLGTERAAAADLAAAFAMALRVRG HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC EAAAGDIAQRFGRAKTWAALFETAVQVVQPLEFATVLTPPDLPAPFVPVRRFEMLSKTAL CHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHEEECCCCCCCCCCHHHHHHHHHHHHH EFRNCLRDYAADLAAGNMTVWVWRGEGGPAAIALRRDAAGWRLAEARGRDNADLSDAALM HHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCEEHHHCCCCCCCCHHHHHH EVAAAVRAAGVRTGEAWSALYRRLQDWVHEDPAGRAPASAPTWREQLGLGCLWD HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA