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The map label for this gene is oxyR [H]

Identifier: 114800072

GI number: 114800072

Start: 3205566

End: 3206495

Strand: Direct

Name: oxyR [H]

Synonym: HNE_3036

Alternate gene names: 114800072

Gene position: 3205566-3206495 (Clockwise)

Preceding gene: 114798948

Following gene: 114800086

Centisome position: 86.52

GC content: 67.85

Gene sequence:

>930_bases
ATGTCTATGAACATTCCCACGCTGCGCCAGCTTCAATTCCTCGTAGCACTCGGCGAATCGGGCTCCTTCTCCCGTGCCGC
CGAGGCATGTCACGTCACCCAGCCCACCCTTTCGGCGGGCATAAAGGAGCTTGAAGATCTCTTTGGGGTTGCGCTTGCGG
AACGCGAATCACGCGGTGCAACATTGACGCATGCTGGGGAAATCGCCGTCGCCCGCGCCTCTGCCCTGCTGGCGGACGCC
CATGCGCTCGTCCAGGCCGTCACCAGCGCCGGCGCACTCTTCTCCGGCCCGTTCCATCTGGGCGCCATCCCCACCATCGC
GCCCTTCGTGCTGCCCCAGATCGTGGGCCAGCTCACCCGGCGCTATCCCGATCTCAAACTCTACCTCACCGAAGACCGCA
CCCACCGCCTGATCGACCAGCTGCGCGCGCGCACGCTGGACGCCGCCTTCATCGCCCTGCCCTGGGAAGCGCCCGGCATC
GAGATGATGACGCTCTTCGACGATGAGTTCCTCCTCGCCGCGCCGGCCGGCCACCCGCTCAGCCGCAAGAACGGCCTCTC
CCCGGAAGACCTTCAGGGCGAAGACCTTCTCCTGCTGGAAGACGGCCACTGCCTGCGCGATCACGCCGTCTCGGTCTGCC
GCCTGAAAGCGGGCGCCGGGCGCGAGCAGGTCGCCGCCACATCGCTGGGCACGCTCGTCAATATGGTGGCCGGCGGGCTC
GGCGTTTCGCTCATCCCGCGCCTTGCCGCCGACAACGGCCTCGCCCTTGGGCCGGACGTTGCCGTCCGCTCCTTCGTCAC
GCCCATCATCGGGCGTCAGGTCGGCATTGCCTGGAAATCCGGCAGCCCGCGCGAGGCCGAGGCCCGCGCGCTCGGAGAGC
TTGTCCGCGAACAGCTCCGCGGTCAGATCAACGCCTCGTCCCTGGCCTGA

Upstream 100 bases:

>100_bases
AAACGGGATTTGTAGCCTACGTCGGTGGCTGCAGGCCGTACCGAATTGGTGCACTGCACGCAATAAATAAAATTGATAAT
TCCGATTAATAATATAGATT

Downstream 100 bases:

>100_bases
AAAGTCTTCGCCGAGCCCCCTACCGCGCGCCGCACAAGCAGAGTATCACGCGGGCATCGGGGGCATTCTGAAAAGGACTT
TGCGGCGGGCATGACAGGGC

Product: putative oxidative stress regulatory protein OxyR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MSMNIPTLRQLQFLVALGESGSFSRAAEACHVTQPTLSAGIKELEDLFGVALAERESRGATLTHAGEIAVARASALLADA
HALVQAVTSAGALFSGPFHLGAIPTIAPFVLPQIVGQLTRRYPDLKLYLTEDRTHRLIDQLRARTLDAAFIALPWEAPGI
EMMTLFDDEFLLAAPAGHPLSRKNGLSPEDLQGEDLLLLEDGHCLRDHAVSVCRLKAGAGREQVAATSLGTLVNMVAGGL
GVSLIPRLAADNGLALGPDVAVRSFVTPIIGRQVGIAWKSGSPREAEARALGELVREQLRGQINASSLA

Sequences:

>Translated_309_residues
MSMNIPTLRQLQFLVALGESGSFSRAAEACHVTQPTLSAGIKELEDLFGVALAERESRGATLTHAGEIAVARASALLADA
HALVQAVTSAGALFSGPFHLGAIPTIAPFVLPQIVGQLTRRYPDLKLYLTEDRTHRLIDQLRARTLDAAFIALPWEAPGI
EMMTLFDDEFLLAAPAGHPLSRKNGLSPEDLQGEDLLLLEDGHCLRDHAVSVCRLKAGAGREQVAATSLGTLVNMVAGGL
GVSLIPRLAADNGLALGPDVAVRSFVTPIIGRQVGIAWKSGSPREAEARALGELVREQLRGQINASSLA
>Mature_308_residues
SMNIPTLRQLQFLVALGESGSFSRAAEACHVTQPTLSAGIKELEDLFGVALAERESRGATLTHAGEIAVARASALLADAH
ALVQAVTSAGALFSGPFHLGAIPTIAPFVLPQIVGQLTRRYPDLKLYLTEDRTHRLIDQLRARTLDAAFIALPWEAPGIE
MMTLFDDEFLLAAPAGHPLSRKNGLSPEDLQGEDLLLLEDGHCLRDHAVSVCRLKAGAGREQVAATSLGTLVNMVAGGLG
VSLIPRLAADNGLALGPDVAVRSFVTPIIGRQVGIAWKSGSPREAEARALGELVREQLRGQINASSLA

Specific function: Required for the induction of a regulon of hydrogen peroxide inducible genes such as catalase and glutathione- reductase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790399, Length=308, Percent_Identity=40.5844155844156, Blast_Score=220, Evalue=1e-58,
Organism=Escherichia coli, GI1788887, Length=301, Percent_Identity=29.5681063122924, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1788748, Length=299, Percent_Identity=28.0936454849498, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI157672245, Length=284, Percent_Identity=28.169014084507, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI145693105, Length=273, Percent_Identity=27.8388278388278, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI2367136, Length=239, Percent_Identity=28.4518828451883, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1788297, Length=248, Percent_Identity=29.0322580645161, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1789204, Length=259, Percent_Identity=26.2548262548263, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787806, Length=244, Percent_Identity=26.2295081967213, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87081904, Length=179, Percent_Identity=29.0502793296089, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790208, Length=249, Percent_Identity=28.5140562248996, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787879, Length=258, Percent_Identity=28.2945736434109, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787601, Length=175, Percent_Identity=26.8571428571429, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1789506, Length=253, Percent_Identity=25.296442687747, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788481, Length=254, Percent_Identity=26.3779527559055, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32695; Mature: 32564

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMNIPTLRQLQFLVALGESGSFSRAAEACHVTQPTLSAGIKELEDLFGVALAERESRGA
CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
TLTHAGEIAVARASALLADAHALVQAVTSAGALFSGPFHLGAIPTIAPFVLPQIVGQLTR
EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RYPDLKLYLTEDRTHRLIDQLRARTLDAAFIALPWEAPGIEMMTLFDDEFLLAAPAGHPL
CCCCEEEEEECCHHHHHHHHHHHHHHCEEEEEECCCCCCCEEEEEECCCEEEECCCCCCC
SRKNGLSPEDLQGEDLLLLEDGHCLRDHAVSVCRLKAGAGREQVAATSLGTLVNMVAGGL
CCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
GVSLIPRLAADNGLALGPDVAVRSFVTPIIGRQVGIAWKSGSPREAEARALGELVREQLR
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHC
GQINASSLA
CCCCHHCCC
>Mature Secondary Structure 
SMNIPTLRQLQFLVALGESGSFSRAAEACHVTQPTLSAGIKELEDLFGVALAERESRGA
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
TLTHAGEIAVARASALLADAHALVQAVTSAGALFSGPFHLGAIPTIAPFVLPQIVGQLTR
EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RYPDLKLYLTEDRTHRLIDQLRARTLDAAFIALPWEAPGIEMMTLFDDEFLLAAPAGHPL
CCCCEEEEEECCHHHHHHHHHHHHHHCEEEEEECCCCCCCEEEEEECCCEEEECCCCCCC
SRKNGLSPEDLQGEDLLLLEDGHCLRDHAVSVCRLKAGAGREQVAATSLGTLVNMVAGGL
CCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
GVSLIPRLAADNGLALGPDVAVRSFVTPIIGRQVGIAWKSGSPREAEARALGELVREQLR
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHC
GQINASSLA
CCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA