Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is yfeW [C]

Identifier: 114800070

GI number: 114800070

Start: 930139

End: 931308

Strand: Direct

Name: yfeW [C]

Synonym: HNE_0914

Alternate gene names: 114800070

Gene position: 930139-931308 (Clockwise)

Preceding gene: 114799039

Following gene: 114798678

Centisome position: 25.1

GC content: 69.15

Gene sequence:

>1170_bases
ATGCGTATCCCCGCCGCCGCCGCGCGCCGCCGCATCGAAGACCTCGTCTATTCCGCCATGGTCCCCGCCGCCGGCCTGGT
CGTGCGTCAGCGCGGCGAGGTCATCTTCGCGCAGGCGCAAGGCCTCGCCCAGGGCGCCGCGGGGGAAGCAGACCCCGCCC
CCTTCACGCCAGACGCGCCGATGCGCATCGCTTCGGTTTCAAAGATGGCCGTCGCAATGACCGCCCACCGCCTCGCGGCC
AAAGGCGCTTTGGATATCGACGCCGACATCCGCGCCGCCTTCAGCCCGCCCTTGATCAATCCCCATTTCCCCGACGCCCC
GATCACCCTGCGCCAGCTCCTCAGCCACACCGCCGGCCTCGAAGACCCGGAGGTCTATTGGCAGCCCCTCCCGGGCCGCA
CCGAAACCCTCTTTACCCAAACCATGTGGCGCACGCCGGACTGGGGCCCGCCCGGCGCGGGCTTCCGCTATGCCAATTTC
GGCTACGGCCTCGCCGGCGCTATCCTTGAGCAGGCAACCGGCGACCGTCTCGACCGCCTCACCGCCCGCGAAGTGCTCGC
CCCCTTGGGCCTCGACATAGGCTTCAACTGGTCCGGCGTCTCCAGCAGGAAGCGCCGCCACGGCGCCACACTCTACAGCC
GCGAAGCAGAGGGTAGCTGGCAGGTGCAGGCCGATGGCCCCACCAATCTCACCGGCTCAGATCCCGCCATCCTCACCGAA
GACGGCGCCCGCCTCGCCGACTATGTTCCGGGCACGAACGGCACCCTCTTCAGCCCCCAGGGCGGCCTGCGCGCGAGCCT
CCACGATATGGCCATCCTCGCCCGCGCCGCTGCGCAAGACCCCGCGATGACCCGCCCCGTCTGGCGCTTCGATCCCGCCG
GCCCCAATGGCGACGACGAACAGCTCTATTTTGAAACCTTCACCCCCGGCGCCCAGATTCACGAAGCGAATGCCTCACCC
ATCCCCGGCGTCAAACTGATCGGCCATCACGGCGAAGCGTACGGGCTCTATTCCGGCGCCTTCCACGCCCCGACGCTCGA
CGCCGAGATCGCCTTCGCCGTTACCGGAACCTCCGTGCCCGGTATGGAGCGCTCGCCCCATCATCCGGTCATCGTCAAGG
CAACCGAGCCCCTCTGGGCCGCGGCGGAAACCCTGCTCGCCGCGCTCTAG

Upstream 100 bases:

>100_bases
TCGGCCGCCGGGGATGACCGGGATGCGGCTCAGCCGGCGCAGCCTGATGGCAGGGGTCGCAGGCGCGGCCCTCACTGCCT
GCGCTCACCGGGCAGACCCC

Downstream 100 bases:

>100_bases
CCTTTTGTTTTCTTGGCCTTGCGCGGCTTTGCGGCCTTCTTGCCTGCCTCCTTCGCCTTGCGCATCCGGTCGCCGCCACC
CATCGCCACCCACCAGAATA

Product: beta-lactamase

Products: NA

Alternate protein names: Amino Acid Adenylation; Amino Acid Adenylation Domain-Containing Protein; Alkaline D-Peptidase; FmtA-Like Protein

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MRIPAAAARRRIEDLVYSAMVPAAGLVVRQRGEVIFAQAQGLAQGAAGEADPAPFTPDAPMRIASVSKMAVAMTAHRLAA
KGALDIDADIRAAFSPPLINPHFPDAPITLRQLLSHTAGLEDPEVYWQPLPGRTETLFTQTMWRTPDWGPPGAGFRYANF
GYGLAGAILEQATGDRLDRLTAREVLAPLGLDIGFNWSGVSSRKRRHGATLYSREAEGSWQVQADGPTNLTGSDPAILTE
DGARLADYVPGTNGTLFSPQGGLRASLHDMAILARAAAQDPAMTRPVWRFDPAGPNGDDEQLYFETFTPGAQIHEANASP
IPGVKLIGHHGEAYGLYSGAFHAPTLDAEIAFAVTGTSVPGMERSPHHPVIVKATEPLWAAAETLLAAL

Sequences:

>Translated_389_residues
MRIPAAAARRRIEDLVYSAMVPAAGLVVRQRGEVIFAQAQGLAQGAAGEADPAPFTPDAPMRIASVSKMAVAMTAHRLAA
KGALDIDADIRAAFSPPLINPHFPDAPITLRQLLSHTAGLEDPEVYWQPLPGRTETLFTQTMWRTPDWGPPGAGFRYANF
GYGLAGAILEQATGDRLDRLTAREVLAPLGLDIGFNWSGVSSRKRRHGATLYSREAEGSWQVQADGPTNLTGSDPAILTE
DGARLADYVPGTNGTLFSPQGGLRASLHDMAILARAAAQDPAMTRPVWRFDPAGPNGDDEQLYFETFTPGAQIHEANASP
IPGVKLIGHHGEAYGLYSGAFHAPTLDAEIAFAVTGTSVPGMERSPHHPVIVKATEPLWAAAETLLAAL
>Mature_389_residues
MRIPAAAARRRIEDLVYSAMVPAAGLVVRQRGEVIFAQAQGLAQGAAGEADPAPFTPDAPMRIASVSKMAVAMTAHRLAA
KGALDIDADIRAAFSPPLINPHFPDAPITLRQLLSHTAGLEDPEVYWQPLPGRTETLFTQTMWRTPDWGPPGAGFRYANF
GYGLAGAILEQATGDRLDRLTAREVLAPLGLDIGFNWSGVSSRKRRHGATLYSREAEGSWQVQADGPTNLTGSDPAILTE
DGARLADYVPGTNGTLFSPQGGLRASLHDMAILARAAAQDPAMTRPVWRFDPAGPNGDDEQLYFETFTPGAQIHEANASP
IPGVKLIGHHGEAYGLYSGAFHAPTLDAEIAFAVTGTSVPGMERSPHHPVIVKATEPLWAAAETLLAAL

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI115533026, Length=213, Percent_Identity=30.0469483568075, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17550934, Length=193, Percent_Identity=27.4611398963731, Blast_Score=71, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41387; Mature: 41387

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIPAAAARRRIEDLVYSAMVPAAGLVVRQRGEVIFAQAQGLAQGAAGEADPAPFTPDAP
CCCCHHHHHHHHHHHHHHHHHHHHCEEEECCCCEEEEECCCHHCCCCCCCCCCCCCCCCC
MRIASVSKMAVAMTAHRLAAKGALDIDADIRAAFSPPLINPHFPDAPITLRQLLSHTAGL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCC
EDPEVYWQPLPGRTETLFTQTMWRTPDWGPPGAGFRYANFGYGLAGAILEQATGDRLDRL
CCCHHEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCHHHHHH
TAREVLAPLGLDIGFNWSGVSSRKRRHGATLYSREAEGSWQVQADGPTNLTGSDPAILTE
HHHHHHHHCCCCCCCCCCCCCHHHHHCCCCEEEECCCCCEEEEECCCCCCCCCCCEEEEC
DGARLADYVPGTNGTLFSPQGGLRASLHDMAILARAAAQDPAMTRPVWRFDPAGPNGDDE
CCCCHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCC
QLYFETFTPGAQIHEANASPIPGVKLIGHHGEAYGLYSGAFHAPTLDAEIAFAVTGTSVP
EEEEEECCCCCEEEECCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCEEEEEEECCCCC
GMERSPHHPVIVKATEPLWAAAETLLAAL
CCCCCCCCCEEEEECCCHHHHHHHHHHCC
>Mature Secondary Structure
MRIPAAAARRRIEDLVYSAMVPAAGLVVRQRGEVIFAQAQGLAQGAAGEADPAPFTPDAP
CCCCHHHHHHHHHHHHHHHHHHHHCEEEECCCCEEEEECCCHHCCCCCCCCCCCCCCCCC
MRIASVSKMAVAMTAHRLAAKGALDIDADIRAAFSPPLINPHFPDAPITLRQLLSHTAGL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCC
EDPEVYWQPLPGRTETLFTQTMWRTPDWGPPGAGFRYANFGYGLAGAILEQATGDRLDRL
CCCHHEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCHHHHHH
TAREVLAPLGLDIGFNWSGVSSRKRRHGATLYSREAEGSWQVQADGPTNLTGSDPAILTE
HHHHHHHHCCCCCCCCCCCCCHHHHHCCCCEEEECCCCCEEEEECCCCCCCCCCCEEEEC
DGARLADYVPGTNGTLFSPQGGLRASLHDMAILARAAAQDPAMTRPVWRFDPAGPNGDDE
CCCCHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCC
QLYFETFTPGAQIHEANASPIPGVKLIGHHGEAYGLYSGAFHAPTLDAEIAFAVTGTSVP
EEEEEECCCCCEEEECCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCEEEEEEECCCCC
GMERSPHHPVIVKATEPLWAAAETLLAAL
CCCCCCCCCEEEEECCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA