| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is fghA [C]
Identifier: 114800056
GI number: 114800056
Start: 554085
End: 554927
Strand: Reverse
Name: fghA [C]
Synonym: HNE_0555
Alternate gene names: 114800056
Gene position: 554927-554085 (Counterclockwise)
Preceding gene: 114797153
Following gene: 114799571
Centisome position: 14.98
GC content: 61.68
Gene sequence:
>843_bases ATGACCCTCACGCAAGTTTCTTCCTGGAAATCCTTTGGCGGCACGCTCTCCGTCCACGACCATGAAAGCGGGCTGCTTGG CTGCACGATGCGCTTTGCCGTCTACGTGCCCCCGCAGGCAAAGGACGGCCCCGTCCCCGTGCTCTGGTATCTCTCCGGCC TCACCTGCACCTGGGCCAATGTGATGGAAAAAGGCGGCATTCAGGAACACGCCGCCCGCCATGGGCTGATGATCATCGCG CCCGACACCTCCCCCCGCGGCGAAGACGTGCCCAATGACGAGGCCTATGACCTCGGCCAGGGCGCAGGCTTCTACCTCAC CGCCACGCAGGACCCCTGGGCCAAAAACTACAAGATGGACCCATACATCACCGATGAACTCCCCGACCTCATCGCCGCAA ACTTCCCCGCAGCCGACATGAGCAGGCAAGGCATCTTCGGCCACTCGATGGGCGGCCACGGCGCCCTGACGCTGCACCTG AAACATCCGGACACTTACAAATCCTGCTCGGCCTTCTCCCCGATCACGTCCCCGGCCCGCGTGCCCTGGGGCGAGAAAGC CTTCACCGCCTATCTCGGCGCGCCTTCCATTGCCTGGGAACAGTATGACGCCACAGAGCTGGTGAAAGAGCGCCCCTCAA AAGCGCTTCTCCTCATCGACACCGGCACGGCAGACAATTTCCTCGAGCCCCAGCTGAAACCGGAAATCTTCATCAAGGCA TGCGAGAAAGACGGCCAGCGCCTCGATTACCGCCTGCGCGAAGGCTATGGCCACGACTATTACTTCATCGCCACCTTCAT GGACGAACATATCGCCCACCATGCCAAGGCGCTGAAAGCCTAG
Upstream 100 bases:
>100_bases CCCTCCCGGCAACCCCTCGCGCGCGCCTTCCTTGACTTGGCCGCCCCCAAAGGGCCAGAAGGCCCTTCCCCCTCACGCAG CCAGCCTCGAGAGCGCCCCC
Downstream 100 bases:
>100_bases ACCGCCTTCGCGTGGCGCTGCTGCGCGAGCGCGGGCGAGCGCGCATCAAAACATTGCCCCACCGTGCGCAGCATTATGCG CGCCTCTTCGGGCACGGTGA
Product: S-formylglutathione hydrolase
Products: NA
Alternate protein names: FGH [H]
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MTLTQVSSWKSFGGTLSVHDHESGLLGCTMRFAVYVPPQAKDGPVPVLWYLSGLTCTWANVMEKGGIQEHAARHGLMIIA PDTSPRGEDVPNDEAYDLGQGAGFYLTATQDPWAKNYKMDPYITDELPDLIAANFPAADMSRQGIFGHSMGGHGALTLHL KHPDTYKSCSAFSPITSPARVPWGEKAFTAYLGAPSIAWEQYDATELVKERPSKALLLIDTGTADNFLEPQLKPEIFIKA CEKDGQRLDYRLREGYGHDYYFIATFMDEHIAHHAKALKA
Sequences:
>Translated_280_residues MTLTQVSSWKSFGGTLSVHDHESGLLGCTMRFAVYVPPQAKDGPVPVLWYLSGLTCTWANVMEKGGIQEHAARHGLMIIA PDTSPRGEDVPNDEAYDLGQGAGFYLTATQDPWAKNYKMDPYITDELPDLIAANFPAADMSRQGIFGHSMGGHGALTLHL KHPDTYKSCSAFSPITSPARVPWGEKAFTAYLGAPSIAWEQYDATELVKERPSKALLLIDTGTADNFLEPQLKPEIFIKA CEKDGQRLDYRLREGYGHDYYFIATFMDEHIAHHAKALKA >Mature_279_residues TLTQVSSWKSFGGTLSVHDHESGLLGCTMRFAVYVPPQAKDGPVPVLWYLSGLTCTWANVMEKGGIQEHAARHGLMIIAP DTSPRGEDVPNDEAYDLGQGAGFYLTATQDPWAKNYKMDPYITDELPDLIAANFPAADMSRQGIFGHSMGGHGALTLHLK HPDTYKSCSAFSPITSPARVPWGEKAFTAYLGAPSIAWEQYDATELVKERPSKALLLIDTGTADNFLEPQLKPEIFIKAC EKDGQRLDYRLREGYGHDYYFIATFMDEHIAHHAKALKA
Specific function: Serine hydrolase involved in the detoxification of formaldehyde. Hydrolyzes S-formylglutathione to glutathione and formate [H]
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
Organism=Homo sapiens, GI33413400, Length=283, Percent_Identity=55.1236749116608, Blast_Score=311, Evalue=3e-85, Organism=Escherichia coli, GI1786551, Length=269, Percent_Identity=48.6988847583643, Blast_Score=275, Evalue=2e-75, Organism=Escherichia coli, GI1788477, Length=271, Percent_Identity=46.8634686346863, Blast_Score=245, Evalue=2e-66, Organism=Caenorhabditis elegans, GI17510185, Length=282, Percent_Identity=48.936170212766, Blast_Score=270, Evalue=8e-73, Organism=Saccharomyces cerevisiae, GI6322393, Length=296, Percent_Identity=40.8783783783784, Blast_Score=211, Evalue=1e-55, Organism=Drosophila melanogaster, GI45551932, Length=285, Percent_Identity=51.5789473684211, Blast_Score=283, Evalue=8e-77, Organism=Drosophila melanogaster, GI24648347, Length=285, Percent_Identity=51.5789473684211, Blast_Score=282, Evalue=1e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR014186 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: =3.1.2.12 [H]
Molecular weight: Translated: 30923; Mature: 30792
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTQVSSWKSFGGTLSVHDHESGLLGCTMRFAVYVPPQAKDGPVPVLWYLSGLTCTWAN CCCCCCCCHHHCCCEEEEECCCCCEEEEEEEEEEEECCCCCCCCEEEEEEECCCCHHHHH VMEKGGIQEHAARHGLMIIAPDTSPRGEDVPNDEAYDLGQGAGFYLTATQDPWAKNYKMD HHHHCCCHHHHHHCCEEEEECCCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCCCCCC PYITDELPDLIAANFPAADMSRQGIFGHSMGGHGALTLHLKHPDTYKSCSAFSPITSPAR CEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHCCCCCCCCCCCC VPWGEKAFTAYLGAPSIAWEQYDATELVKERPSKALLLIDTGTADNFLEPQLKPEIFIKA CCCCCHHEEEECCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHEE CEKDGQRLDYRLREGYGHDYYFIATFMDEHIAHHAKALKA HHCCCCHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCC >Mature Secondary Structure TLTQVSSWKSFGGTLSVHDHESGLLGCTMRFAVYVPPQAKDGPVPVLWYLSGLTCTWAN CCCCCCCHHHCCCEEEEECCCCCEEEEEEEEEEEECCCCCCCCEEEEEEECCCCHHHHH VMEKGGIQEHAARHGLMIIAPDTSPRGEDVPNDEAYDLGQGAGFYLTATQDPWAKNYKMD HHHHCCCHHHHHHCCEEEEECCCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCCCCCC PYITDELPDLIAANFPAADMSRQGIFGHSMGGHGALTLHLKHPDTYKSCSAFSPITSPAR CEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHCCCCCCCCCCCC VPWGEKAFTAYLGAPSIAWEQYDATELVKERPSKALLLIDTGTADNFLEPQLKPEIFIKA CCCCCHHEEEECCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHEE CEKDGQRLDYRLREGYGHDYYFIATFMDEHIAHHAKALKA HHCCCCHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]