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The map label for this gene is ybaC [H]

Identifier: 114800044

GI number: 114800044

Start: 3564320

End: 3565501

Strand: Reverse

Name: ybaC [H]

Synonym: HNE_3424

Alternate gene names: 114800044

Gene position: 3565501-3564320 (Counterclockwise)

Preceding gene: 114797901

Following gene: 114798583

Centisome position: 96.23

GC content: 64.13

Gene sequence:

>1182_bases
ATGAAAACCCGTGCCTTGCTGATCGCGCTCGCCGCCACCGCCATTCTTGCGGCGTGCGGGCAGAATGTATCCCAGCCAGC
GGACAAGCCTGCGCCAGAGACGGAAGCCGTAGAGGCGTCTCGTCCGGCAGTAGACGGTCGCGCGATTGTTGCGGACATCG
GCAAGATCAACACGCCAAATGGCATCGAGGAGTCGTTTGCTGCCCCGATTGGCGGGGTCGATCAATGGCTCTCCATTCGC
GGCAAGGACCGGGACAACCCGGTCATCCTGATTGTCCACGGGGGCCCCGGTTCGGCAGAACTTGCGATTGGCTGGACCTT
CCAGCGCGGCTGGGAGGATTATTTCACCGTGGTTCAGTGGGACCAGCGCGGCGCGGGCAAGACCTACAGCCTGACAGACC
CTGACGCCGTGATCCCGACGCTGTCTGTGGACCGGATGAAGGCGGATGTCATCGAAGTGGCCGAGCTGGTGCGGCAGAGG
CTCGGCAAGGAAAAGGTGATCCTGCTCGGGCATTCCTGGGGAACGATCATCGGCCTGCAGGCAGCGGTGGAGCGCCCCGA
TCTCTTTGCCGCTTATGCCGCCCACGGGCAGGTCATCAACATGCAGCGCAATGAGGAAGAAGGCTTTCGCCTCACGCTGG
AAGCAGCAAAGGCCGATGGCAATACCGAGGCCGTTGAGGCGCTCGAAGCGCTTGAGCCCTATCCCGACGATCTGACGGTG
GAACGTATCGGCGACCAGCGGACCTGGTCCATCCATTATGGCGGCCTTGCCGCCTATCGCCAGGACGCGGCGCCCTGGTT
TCGCGCCATGCGGCTTTCAGCCGACTATGATGACGCGGTGCTGAACGGCTATGATGCCGGCAGCCTGGCGAGCATCACGG
CGCTGATGCCGGAGCTGCGCGCGGTGGATATGGACGCCATCACCACAAGTCCCGTGCCGGTATTTCTGCTGCACGGCCGT
CAGGACCTTACGACGCCGCCGACAGCCAGCGCGGCCTGGTTCGACCGGCTCAGCGCGCCGGCAAAAGCCGAATACTGGTT
TGATCACTCCGCCCACCTCGCCTTCATGGAGGAGCCGGGCGCGGTGCTGATGACGCTCGTAACCTGCATCCGCCCCTATG
CGGCAGAGCCGGACATGGACGCGGCGCGCGCCAAGGCGGCGGCATGTGTGCAGGCTGAATGA

Upstream 100 bases:

>100_bases
TGGCTGATCGGACACGCTCTCTCCCGTGACAGCTGGCAGCAGCGGGAGGTGCATCCAAATGCGCTTCCCGCTGCATCTCC
TCTCAAAAGGGAGCAACCAG

Downstream 100 bases:

>100_bases
GCGCGCCTCAGTTGGCGAGCTTCATCCAGTCGCGGGCCGATTGCAGCGCGAGCTTCACTTCAGCCGAGGTCAGCATCTCT
GCCATTTCCTGGCGCTGGGC

Product: alpha/beta fold family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MKTRALLIALAATAILAACGQNVSQPADKPAPETEAVEASRPAVDGRAIVADIGKINTPNGIEESFAAPIGGVDQWLSIR
GKDRDNPVILIVHGGPGSAELAIGWTFQRGWEDYFTVVQWDQRGAGKTYSLTDPDAVIPTLSVDRMKADVIEVAELVRQR
LGKEKVILLGHSWGTIIGLQAAVERPDLFAAYAAHGQVINMQRNEEEGFRLTLEAAKADGNTEAVEALEALEPYPDDLTV
ERIGDQRTWSIHYGGLAAYRQDAAPWFRAMRLSADYDDAVLNGYDAGSLASITALMPELRAVDMDAITTSPVPVFLLHGR
QDLTTPPTASAAWFDRLSAPAKAEYWFDHSAHLAFMEEPGAVLMTLVTCIRPYAAEPDMDAARAKAAACVQAE

Sequences:

>Translated_393_residues
MKTRALLIALAATAILAACGQNVSQPADKPAPETEAVEASRPAVDGRAIVADIGKINTPNGIEESFAAPIGGVDQWLSIR
GKDRDNPVILIVHGGPGSAELAIGWTFQRGWEDYFTVVQWDQRGAGKTYSLTDPDAVIPTLSVDRMKADVIEVAELVRQR
LGKEKVILLGHSWGTIIGLQAAVERPDLFAAYAAHGQVINMQRNEEEGFRLTLEAAKADGNTEAVEALEALEPYPDDLTV
ERIGDQRTWSIHYGGLAAYRQDAAPWFRAMRLSADYDDAVLNGYDAGSLASITALMPELRAVDMDAITTSPVPVFLLHGR
QDLTTPPTASAAWFDRLSAPAKAEYWFDHSAHLAFMEEPGAVLMTLVTCIRPYAAEPDMDAARAKAAACVQAE
>Mature_393_residues
MKTRALLIALAATAILAACGQNVSQPADKPAPETEAVEASRPAVDGRAIVADIGKINTPNGIEESFAAPIGGVDQWLSIR
GKDRDNPVILIVHGGPGSAELAIGWTFQRGWEDYFTVVQWDQRGAGKTYSLTDPDAVIPTLSVDRMKADVIEVAELVRQR
LGKEKVILLGHSWGTIIGLQAAVERPDLFAAYAAHGQVINMQRNEEEGFRLTLEAAKADGNTEAVEALEALEPYPDDLTV
ERIGDQRTWSIHYGGLAAYRQDAAPWFRAMRLSADYDDAVLNGYDAGSLASITALMPELRAVDMDAITTSPVPVFLLHGR
QDLTTPPTASAAWFDRLSAPAKAEYWFDHSAHLAFMEEPGAVLMTLVTCIRPYAAEPDMDAARAKAAACVQAE

Specific function: Probable aminopeptidase [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S33 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR002410 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: 3.4.11.5

Molecular weight: Translated: 42450; Mature: 42450

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRALLIALAATAILAACGQNVSQPADKPAPETEAVEASRPAVDGRAIVADIGKINTPN
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCCCC
GIEESFAAPIGGVDQWLSIRGKDRDNPVILIVHGGPGSAELAIGWTFQRGWEDYFTVVQW
CCHHHHCCCCCCHHHHHEECCCCCCCCEEEEEECCCCCCEEEEEEEHHCCCCCEEEEEEE
DQRGAGKTYSLTDPDAVIPTLSVDRMKADVIEVAELVRQRLGKEKVILLGHSWGTIIGLQ
CCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEHH
AAVERPDLFAAYAAHGQVINMQRNEEEGFRLTLEAAKADGNTEAVEALEALEPYPDDLTV
HHHCCCCCEEEECCCCEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCC
ERIGDQRTWSIHYGGLAAYRQDAAPWFRAMRLSADYDDAVLNGYDAGSLASITALMPELR
EECCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHH
AVDMDAITTSPVPVFLLHGRQDLTTPPTASAAWFDRLSAPAKAEYWFDHSAHLAFMEEPG
HCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCEEEEECCCC
AVLMTLVTCIRPYAAEPDMDAARAKAAACVQAE
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKTRALLIALAATAILAACGQNVSQPADKPAPETEAVEASRPAVDGRAIVADIGKINTPN
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCCCC
GIEESFAAPIGGVDQWLSIRGKDRDNPVILIVHGGPGSAELAIGWTFQRGWEDYFTVVQW
CCHHHHCCCCCCHHHHHEECCCCCCCCEEEEEECCCCCCEEEEEEEHHCCCCCEEEEEEE
DQRGAGKTYSLTDPDAVIPTLSVDRMKADVIEVAELVRQRLGKEKVILLGHSWGTIIGLQ
CCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEHH
AAVERPDLFAAYAAHGQVINMQRNEEEGFRLTLEAAKADGNTEAVEALEALEPYPDDLTV
HHHCCCCCEEEECCCCEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCC
ERIGDQRTWSIHYGGLAAYRQDAAPWFRAMRLSADYDDAVLNGYDAGSLASITALMPELR
EECCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHH
AVDMDAITTSPVPVFLLHGRQDLTTPPTASAAWFDRLSAPAKAEYWFDHSAHLAFMEEPG
HCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCEEEEECCCC
AVLMTLVTCIRPYAAEPDMDAARAKAAACVQAE
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969501; 9384377 [H]