| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114799941
Identifier: 114799941
GI number: 114799941
Start: 3049783
End: 3050568
Strand: Reverse
Name: 114799941
Synonym: HNE_2890
Alternate gene names: NA
Gene position: 3050568-3049783 (Counterclockwise)
Preceding gene: 114797362
Following gene: 114799204
Centisome position: 82.34
GC content: 59.03
Gene sequence:
>786_bases GTGGGGCAAGTAACCACTGAAAAGGACTTAGCCATGAAAATGCTTCTTGCTACTGCCAGTGCCTCCGCCCTGCTGCTTGC TGCTGCCGCCTGTTCAGACGCAGACGCTCCGGCACAGACGGCTGGCTATGAAACCAACGGCCCGCAGATCGAAACGGTTG ATGACGCTGATGACCAGACGGTCGAAGCGGCTGAAGCAGATACCGATGTCGATGCGTCGACGCGGACCGAGTACACCCTT GCTGCCGGCGAGATGGAAGCTTCCGACCTGATCGGCGCTTCGGTGCACGGTCCGGCCGGTGAAGAGATTGCTACTGTTGC CGACATCTTCCTGGGCACCAACGGCATGGAGCCGGTGCTTCTGGTCCGTGACGGCGGCATCAGCGGCCTGGGCGGTGACC TGCGCACGCTGAACTTTGACGCCGCAACCGTTTCGGGTGAGGCCGGTGATGAGCCAGACCTGATCATTGCGATCACTGAA GAAAATCTCGAGACCTTGCCGGAATTTGAGCAGGACGAAATGAACGATTTCCGTCTCGCTTCGGAAATGATGGGCGCAGT GCCGGCCATGAGCTTCAGCGATGAGCAGGCCCGTGTGAACGACCTGATCGTGACCAATACCGGTGAGCTGAAATATGCCG TGATTTCGCCGGGCCTTGTGTCCACCGACCAGATCGTGATCGACGCCAATGCGATCAAGGTCGCAGAGGGTGATGGAGAA GGCGAGGTCGTGATCGACATTGATCAAGCCGCCTTCGATGAAGCCCCGATGTACCGCTGGGAGTAG
Upstream 100 bases:
>100_bases AGCCAGGGCTGAGCCGCCGCCTGATTTTCAGAAGCGCCTTAGTCTCGCCTTGAGTCTGAAAAGACGGAAAGGTTGGAACA AGTCAGGCCGGGGTCCGTTG
Downstream 100 bases:
>100_bases TCGCAGCCGTGATCGATCCGAGGGCCCCGCCGAAAGGTGGGGCCCTTTTTCGTGGACGGTGTAGTGGGCAATTGTATTTT TGGGGGAAATGCCAATCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MGQVTTEKDLAMKMLLATASASALLLAAAACSDADAPAQTAGYETNGPQIETVDDADDQTVEAAEADTDVDASTRTEYTL AAGEMEASDLIGASVHGPAGEEIATVADIFLGTNGMEPVLLVRDGGISGLGGDLRTLNFDAATVSGEAGDEPDLIIAITE ENLETLPEFEQDEMNDFRLASEMMGAVPAMSFSDEQARVNDLIVTNTGELKYAVISPGLVSTDQIVIDANAIKVAEGDGE GEVVIDIDQAAFDEAPMYRWE
Sequences:
>Translated_261_residues MGQVTTEKDLAMKMLLATASASALLLAAAACSDADAPAQTAGYETNGPQIETVDDADDQTVEAAEADTDVDASTRTEYTL AAGEMEASDLIGASVHGPAGEEIATVADIFLGTNGMEPVLLVRDGGISGLGGDLRTLNFDAATVSGEAGDEPDLIIAITE ENLETLPEFEQDEMNDFRLASEMMGAVPAMSFSDEQARVNDLIVTNTGELKYAVISPGLVSTDQIVIDANAIKVAEGDGE GEVVIDIDQAAFDEAPMYRWE >Mature_260_residues GQVTTEKDLAMKMLLATASASALLLAAAACSDADAPAQTAGYETNGPQIETVDDADDQTVEAAEADTDVDASTRTEYTLA AGEMEASDLIGASVHGPAGEEIATVADIFLGTNGMEPVLLVRDGGISGLGGDLRTLNFDAATVSGEAGDEPDLIIAITEE NLETLPEFEQDEMNDFRLASEMMGAVPAMSFSDEQARVNDLIVTNTGELKYAVISPGLVSTDQIVIDANAIKVAEGDGEG EVVIDIDQAAFDEAPMYRWE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27258; Mature: 27127
Theoretical pI: Translated: 3.43; Mature: 3.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQVTTEKDLAMKMLLATASASALLLAAAACSDADAPAQTAGYETNGPQIETVDDADDQT CCCCCCHHHHHHHHHHHHCCHHHEEHHHHHCCCCCCCHHHCCCCCCCCEEEECCCCCCCE VEAAEADTDVDASTRTEYTLAAGEMEASDLIGASVHGPAGEEIATVADIFLGTNGMEPVL EECCCCCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEE LVRDGGISGLGGDLRTLNFDAATVSGEAGDEPDLIIAITEENLETLPEFEQDEMNDFRLA EEECCCCCCCCCCEEEEEECCEEECCCCCCCCCEEEEEECCCHHHCCCCCCHHHHHHHHH SEMMGAVPAMSFSDEQARVNDLIVTNTGELKYAVISPGLVSTDQIVIDANAIKVAEGDGE HHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEEEECCEEEEECCCCC GEVVIDIDQAAFDEAPMYRWE CCEEEEECHHCCCCCCCCCCC >Mature Secondary Structure GQVTTEKDLAMKMLLATASASALLLAAAACSDADAPAQTAGYETNGPQIETVDDADDQT CCCCCHHHHHHHHHHHHCCHHHEEHHHHHCCCCCCCHHHCCCCCCCCEEEECCCCCCCE VEAAEADTDVDASTRTEYTLAAGEMEASDLIGASVHGPAGEEIATVADIFLGTNGMEPVL EECCCCCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEE LVRDGGISGLGGDLRTLNFDAATVSGEAGDEPDLIIAITEENLETLPEFEQDEMNDFRLA EEECCCCCCCCCCEEEEEECCEEECCCCCCCCCEEEEEECCCHHHCCCCCCHHHHHHHHH SEMMGAVPAMSFSDEQARVNDLIVTNTGELKYAVISPGLVSTDQIVIDANAIKVAEGDGE HHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEEEECCEEEEECCCCC GEVVIDIDQAAFDEAPMYRWE CCEEEEECHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA