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The map label for this gene is ydjA [H]

Identifier: 114799931

GI number: 114799931

Start: 1914504

End: 1915142

Strand: Direct

Name: ydjA [H]

Synonym: HNE_1854

Alternate gene names: 114799931

Gene position: 1914504-1915142 (Clockwise)

Preceding gene: 114798799

Following gene: 114798975

Centisome position: 51.67

GC content: 64.95

Gene sequence:

>639_bases
GTGACAAAGCTCTTTCCCGATCCCCCGCCCCCAGGCTCCCCGCTGCTGGCTGCAAGGCCGGCCAACGCGGTCCGCAGCTT
CCTTGCCTTGCGCAAATCCGCCAACAAGCAGTTCCTGAGCGAACCCGGCCCGACAGCCGATGAGCTGGACCAGCTCCTCA
GTATAGCTGCCCGCGTGCCCGACCACCGGAAGATGACCCCCTGGCGCTTCATTACCTTCCAGGGCAATGCCCGGCAGGAC
TTCGGCAAGGCCCTCGCCACCATTGCCGGTCGCAAGCCCAATGCAGAATCGCGCGACGTGGTCGAAGCTGCCGGACTGCT
GCTTCGTGCGCCAACGGTCGTCGCAGTCATATCCGCGCCTGTCGATGATGGCCGCACGCCTGTGTGGGAGCAGGAGCTGT
CGGCCGGAGCGCTCTGCTACAACCTGCTCCTCGCGGCCAACGCCAGCGGCTGGGGCGGCGTGTGGCTATCGGAATGGATC
ACCTTCAGTGAAGAGGTGGACGTCCTGTTGGGCCTCAAGCCAAACGAGCGTCTCGCAGGCTTCATCTACATTGGCACCGC
GACAGCGTCCCCTCAGGAACGGATACGTCCAGACCTGTCCGGACTGGTCTCCGCCTGGTCTCCGGATGTCCCGGACTGA

Upstream 100 bases:

>100_bases
TCACCAATAAGGTAATACGCCGATTAAGCATGTCTGACAAGCAATTCATTGGCCTGATTGAGCCTTTGCGGCGGGCGCCT
GAAAAGGTAAGGCGTGGAGT

Downstream 100 bases:

>100_bases
CCGGGTTTGTCCAAGTTTGTCCAGATTTGTCCGCGTTTGTCCGGGATTATCCGCGCCCGCGATAGGACGCGACGCCCGTA
TCGGGCACGTAAAGCCCCTT

Product: nitroreductase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MTKLFPDPPPPGSPLLAARPANAVRSFLALRKSANKQFLSEPGPTADELDQLLSIAARVPDHRKMTPWRFITFQGNARQD
FGKALATIAGRKPNAESRDVVEAAGLLLRAPTVVAVISAPVDDGRTPVWEQELSAGALCYNLLLAANASGWGGVWLSEWI
TFSEEVDVLLGLKPNERLAGFIYIGTATASPQERIRPDLSGLVSAWSPDVPD

Sequences:

>Translated_212_residues
MTKLFPDPPPPGSPLLAARPANAVRSFLALRKSANKQFLSEPGPTADELDQLLSIAARVPDHRKMTPWRFITFQGNARQD
FGKALATIAGRKPNAESRDVVEAAGLLLRAPTVVAVISAPVDDGRTPVWEQELSAGALCYNLLLAANASGWGGVWLSEWI
TFSEEVDVLLGLKPNERLAGFIYIGTATASPQERIRPDLSGLVSAWSPDVPD
>Mature_211_residues
TKLFPDPPPPGSPLLAARPANAVRSFLALRKSANKQFLSEPGPTADELDQLLSIAARVPDHRKMTPWRFITFQGNARQDF
GKALATIAGRKPNAESRDVVEAAGLLLRAPTVVAVISAPVDDGRTPVWEQELSAGALCYNLLLAANASGWGGVWLSEWIT
FSEEVDVLLGLKPNERLAGFIYIGTATASPQERIRPDLSGLVSAWSPDVPD

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=163, Percent_Identity=34.3558282208589, Blast_Score=107, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 22822; Mature: 22691

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLFPDPPPPGSPLLAARPANAVRSFLALRKSANKQFLSEPGPTADELDQLLSIAARVP
CCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHCC
DHRKMTPWRFITFQGNARQDFGKALATIAGRKPNAESRDVVEAAGLLLRAPTVVAVISAP
CCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECC
VDDGRTPVWEQELSAGALCYNLLLAANASGWGGVWLSEWITFSEEVDVLLGLKPNERLAG
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCEEE
FIYIGTATASPQERIRPDLSGLVSAWSPDVPD
EEEEECCCCCCHHHHCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
TKLFPDPPPPGSPLLAARPANAVRSFLALRKSANKQFLSEPGPTADELDQLLSIAARVP
CCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHCC
DHRKMTPWRFITFQGNARQDFGKALATIAGRKPNAESRDVVEAAGLLLRAPTVVAVISAP
CCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECC
VDDGRTPVWEQELSAGALCYNLLLAANASGWGGVWLSEWITFSEEVDVLLGLKPNERLAG
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCEEE
FIYIGTATASPQERIRPDLSGLVSAWSPDVPD
EEEEECCCCCCHHHHCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]