| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is pstA [H]
Identifier: 114799902
GI number: 114799902
Start: 2107127
End: 2108704
Strand: Reverse
Name: pstA [H]
Synonym: HNE_2031
Alternate gene names: 114799902
Gene position: 2108704-2107127 (Counterclockwise)
Preceding gene: 114797381
Following gene: 114799554
Centisome position: 56.91
GC content: 64.45
Gene sequence:
>1578_bases ATGACTGATCCGGCCGCCTCGCCCTTTTCAAAGCCCGATGCCCTGAAACGCCTCAAGCGCCGCCGCGCGTCGGATGTGCG CTTCCGCCTGTATGGCATGGGCGCGATCTTCCTGGCGCTCGGCGCGCTGGTGATGCTGGCGCTGTCCATCGGCTCGCAGG CCATTTCGGCGGCAACCTACCATGTCGCGCGCTACGACATCACGCTCGACCCCGCTGTCATCGCGCCGCCCGGTGAAAAC ACGCCCGAAGAGATTGCCCGCAATGTCGATGGCTTCTGGGAACTGGTGCGCGACAATCTGATCGCAACCTTCCCCGAATC GGACCGCGACCGCGCCACGCGCCTGGAAGTGTCAGAATTCATTACCCGTCTGGCCGTGCTTCCCGCCGCCCGGAAAGTCG CCGCCCGGCCCCAGCTGATCGGAAACGAGATAGAGCTTGCTGCGCCGCTGAACGACGATCTCGACCTTTACCTGAAAGGT CAGGCCTTCGCCGAGCGCCGCGTACGCGTCAGCGGCATCACATCGGTCGCCGCGCAGGAAGATGGCAGCGTGCTGCTGAC AGGGCAGGGCGCTTTCACGCCCATCCGCACGGCCATGACCACGCTGGAATCAGATGGCGTAAACCTTGAAGATGGCTCGG TCCTACTCACCGCCGGCGCGGCGACAGGGCGCCTGCAAGGCATCGAGCCTGGCACCGCTCGCCTGGAACTGCTCACCGGC ACGCTGGACGCATTTCAGGGCGCCACCGCGACCGCTCGCATCATCGCGCTCCCCGAAGCTCAGCGCGTTGTCTCCGACCA GCAGATCGCCTGGACGCTTGCCCTTCAGGAGATGGGCCGGATTTCCCGCGTGCCCCGCTGGAGCCTGCTGACCCATTCGG ACTCCACCTATCCCGAGCTTGCCGGCGGCCTCGCCGCCCTGGTCGGCTCCCTGTTCACGATGCTCGTCACAGCGCTGGTC GCCATTCCGATCGGCATTCTGGCGGCGGTCTATCTGGAAGAATTCGCGCCCAAGAACCGGCTGACCGATTTCATCGAGGT GAACATCAACAATCTCGCCGCGGTTCCCTCCATTGTGTTCGGTCTGCTCGGCGCGGCGGTCTATATCAACTTCCTCGGCA TGCCCCGGTCTGCGCCATTGGTTGGCGGCCTTGTGCTGGCGCTGATGACGTTCCCCGTGGTGATCATCGCCGCGCGCGCT GCGCTCAAGGCGGTTCCGCCGTCGGTGCGCTCGGGCGCGCTGGCCATTGGTGCCTCGCAGATGCAGACCGTTTTCCATCA TGTGGTGCCGCTCGCGGCGCCCGGCATCCTCACGGGCGCCATCCTCGGCATGGCCCGCGCGCTGGGTGAAACCGCGCCGC TGCTGTTGATCGGCATGGTCGCTTTCGTGGGCGATGTGCCTTCCAGCCCGACGGATGAGTCCACCGTCATGCCGGTGCTG ATCTTCTCCTGGTCAAACAATGCAGAACGCGCCTGGGAGCCGATGACATCCGCGATGATCGTCATTCTTTTGGCGGTGCT TTTGCTGATGAACGGGTTGGTGGTATTCCTCAGACGTAAATACGAGCGGAGATGGTAA
Upstream 100 bases:
>100_bases AAGACCCTCTCCGCGTTCGCCCTTGGCCTCGTTCTGTTTGCCGTAACGCTGATCTTCAACGTGATCGCCCTGCGCGTGGT CCAGAAATACCGGGAAAAGT
Downstream 100 bases:
>100_bases TGGATACGGATCACAGACCGCAGGCCGAGGGGGCTGTGCTGACGCCCTCCGCCGAGGCCCCGCCAGTCGCCGCGCCGCGG ATTGATTGCCGCGACATCCG
Product: phosphate ABC transporter permease PtsA
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 525; Mature: 524
Protein sequence:
>525_residues MTDPAASPFSKPDALKRLKRRRASDVRFRLYGMGAIFLALGALVMLALSIGSQAISAATYHVARYDITLDPAVIAPPGEN TPEEIARNVDGFWELVRDNLIATFPESDRDRATRLEVSEFITRLAVLPAARKVAARPQLIGNEIELAAPLNDDLDLYLKG QAFAERRVRVSGITSVAAQEDGSVLLTGQGAFTPIRTAMTTLESDGVNLEDGSVLLTAGAATGRLQGIEPGTARLELLTG TLDAFQGATATARIIALPEAQRVVSDQQIAWTLALQEMGRISRVPRWSLLTHSDSTYPELAGGLAALVGSLFTMLVTALV AIPIGILAAVYLEEFAPKNRLTDFIEVNINNLAAVPSIVFGLLGAAVYINFLGMPRSAPLVGGLVLALMTFPVVIIAARA ALKAVPPSVRSGALAIGASQMQTVFHHVVPLAAPGILTGAILGMARALGETAPLLLIGMVAFVGDVPSSPTDESTVMPVL IFSWSNNAERAWEPMTSAMIVILLAVLLLMNGLVVFLRRKYERRW
Sequences:
>Translated_525_residues MTDPAASPFSKPDALKRLKRRRASDVRFRLYGMGAIFLALGALVMLALSIGSQAISAATYHVARYDITLDPAVIAPPGEN TPEEIARNVDGFWELVRDNLIATFPESDRDRATRLEVSEFITRLAVLPAARKVAARPQLIGNEIELAAPLNDDLDLYLKG QAFAERRVRVSGITSVAAQEDGSVLLTGQGAFTPIRTAMTTLESDGVNLEDGSVLLTAGAATGRLQGIEPGTARLELLTG TLDAFQGATATARIIALPEAQRVVSDQQIAWTLALQEMGRISRVPRWSLLTHSDSTYPELAGGLAALVGSLFTMLVTALV AIPIGILAAVYLEEFAPKNRLTDFIEVNINNLAAVPSIVFGLLGAAVYINFLGMPRSAPLVGGLVLALMTFPVVIIAARA ALKAVPPSVRSGALAIGASQMQTVFHHVVPLAAPGILTGAILGMARALGETAPLLLIGMVAFVGDVPSSPTDESTVMPVL IFSWSNNAERAWEPMTSAMIVILLAVLLLMNGLVVFLRRKYERRW >Mature_524_residues TDPAASPFSKPDALKRLKRRRASDVRFRLYGMGAIFLALGALVMLALSIGSQAISAATYHVARYDITLDPAVIAPPGENT PEEIARNVDGFWELVRDNLIATFPESDRDRATRLEVSEFITRLAVLPAARKVAARPQLIGNEIELAAPLNDDLDLYLKGQ AFAERRVRVSGITSVAAQEDGSVLLTGQGAFTPIRTAMTTLESDGVNLEDGSVLLTAGAATGRLQGIEPGTARLELLTGT LDAFQGATATARIIALPEAQRVVSDQQIAWTLALQEMGRISRVPRWSLLTHSDSTYPELAGGLAALVGSLFTMLVTALVA IPIGILAAVYLEEFAPKNRLTDFIEVNINNLAAVPSIVFGLLGAAVYINFLGMPRSAPLVGGLVLALMTFPVVIIAARAA LKAVPPSVRSGALAIGASQMQTVFHHVVPLAAPGILTGAILGMARALGETAPLLLIGMVAFVGDVPSSPTDESTVMPVLI FSWSNNAERAWEPMTSAMIVILLAVLLLMNGLVVFLRRKYERRW
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0581
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790163, Length=224, Percent_Identity=33.0357142857143, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI1790164, Length=177, Percent_Identity=28.8135593220339, Blast_Score=73, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005672 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 55972; Mature: 55841
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPAASPFSKPDALKRLKRRRASDVRFRLYGMGAIFLALGALVMLALSIGSQAISAATY CCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHH HVARYDITLDPAVIAPPGENTPEEIARNVDGFWELVRDNLIATFPESDRDRATRLEVSEF EEEEEEEEECCEEECCCCCCCHHHHHHCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHH ITRLAVLPAARKVAARPQLIGNEIELAAPLNDDLDLYLKGQAFAERRVRVSGITSVAAQE HHHHHHHHHHHHHHCCCHHCCCCEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCC DGSVLLTGQGAFTPIRTAMTTLESDGVNLEDGSVLLTAGAATGRLQGIEPGTARLELLTG CCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEHHH TLDAFQGATATARIIALPEAQRVVSDQQIAWTLALQEMGRISRVPRWSLLTHSDSTYPEL HHHHHCCCCCCEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHH AGGLAALVGSLFTMLVTALVAIPIGILAAVYLEEFAPKNRLTDFIEVNINNLAAVPSIVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCHHHHHHHHHHH GLLGAAVYINFLGMPRSAPLVGGLVLALMTFPVVIIAARAALKAVPPSVRSGALAIGASQ HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHH MQTVFHHVVPLAAPGILTGAILGMARALGETAPLLLIGMVAFVGDVPSSPTDESTVMPVL HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEE IFSWSNNAERAWEPMTSAMIVILLAVLLLMNGLVVFLRRKYERRW EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDPAASPFSKPDALKRLKRRRASDVRFRLYGMGAIFLALGALVMLALSIGSQAISAATY CCCCCCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHH HVARYDITLDPAVIAPPGENTPEEIARNVDGFWELVRDNLIATFPESDRDRATRLEVSEF EEEEEEEEECCEEECCCCCCCHHHHHHCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHH ITRLAVLPAARKVAARPQLIGNEIELAAPLNDDLDLYLKGQAFAERRVRVSGITSVAAQE HHHHHHHHHHHHHHCCCHHCCCCEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCC DGSVLLTGQGAFTPIRTAMTTLESDGVNLEDGSVLLTAGAATGRLQGIEPGTARLELLTG CCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEHHH TLDAFQGATATARIIALPEAQRVVSDQQIAWTLALQEMGRISRVPRWSLLTHSDSTYPEL HHHHHCCCCCCEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHH AGGLAALVGSLFTMLVTALVAIPIGILAAVYLEEFAPKNRLTDFIEVNINNLAAVPSIVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCHHHHHHHHHHH GLLGAAVYINFLGMPRSAPLVGGLVLALMTFPVVIIAARAALKAVPPSVRSGALAIGASQ HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHH MQTVFHHVVPLAAPGILTGAILGMARALGETAPLLLIGMVAFVGDVPSSPTDESTVMPVL HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEE IFSWSNNAERAWEPMTSAMIVILLAVLLLMNGLVVFLRRKYERRW EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]