| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799883
Identifier: 114799883
GI number: 114799883
Start: 1463761
End: 1465443
Strand: Reverse
Name: 114799883
Synonym: HNE_1433
Alternate gene names: NA
Gene position: 1465443-1463761 (Counterclockwise)
Preceding gene: 114800203
Following gene: 114797292
Centisome position: 39.55
GC content: 64.82
Gene sequence:
>1683_bases ATGCCACATAAGCGTTTGTTGACGGGCCTCATGGCTGGCATCTTTGTGGCTGTTGCAGCGTTCGCAGAGCCGGCCACGCC GCCAGGTGACGAAGTGGAAGCTGTCAAGCTCGATTACGGCAATCGCCCGGACAAAGACGGGCAGTTTGCGTCAGTGGAGG CGACGGTAGGCGATACACCCGTCCGATACTATGCGCGCGGTACCAATGTGTCGGCGCCTTTCTCGGTGCAGGTGATTGCC GCCAGCCTGGAGCGCCCGCTGGAAGTGACGCTGCACCGCCAGAACTGGGGCAAGGTTGTCCACTCCGGATCGACCGGCCG AGCGGGCAGCTTCGTGTTCGAGGGCCGCGCGCATGGGGATGTGGGGGTTCAGCTCACCTCACCGGGCGGCGCGCCAGCCC GCGCCACCCTGGTGTTCTGGCAGGGCGCGCCCGCTGCGCCAAGCATGGCACGCGTCTACATTACGCCTGAGATGGCAGAC GCTGGCATCAGTGCCACAAGCCAGGCGCGCGATAAGGCAGGCGGTCAGGGCCGAGGCGCATCTCCCGTCCTCTACGTCAT CGCGGGCTTACTGGCGGTGATCGTGGTGTTCCTGGGCGTGATGATGCTGCGCCGGGGCAAGGGTGGGGCGGTCGCCGCAG TGCTGATCGGCGGCCTGATGATGGCGTCGATCCATGATCCGGCCCCCGCCTATGCGCAGGGCGAGGAGGCCCCGCCAGGC GGCGACGCCCCCAATCCGTTTGCTGTCGACAAGCCCCTGCCCGAGGTGCCCCGCGACAAGGACAAAGACGCCAGCGCCGG AAAGCCTGACCAGGCGCCCAACCCGTTTGACGTCGACAAGCCCCTCCCCGACGTGCCACGCGATAAGGACAAGGATGCCA GCGCTGGCAAACCTGAGGACAAGCCGGAGGACTCCCCGCCCAACCCCTTTGCGGGCGAGCCGACGAGCAGCTCGGGGCGG CCGATTGACCTCAAGCCGGAGGATTTCGACCCGAGCAACGCGCCGAAGGACGATGCGTCGTCCGAAGACGCAGGTTCTGA GGATATGGGCTCTGAAGACGCTGGCCCGGCGCCGGTGGATGAAGACTATGGTGATCGCCTCGCCGAAGCGGACCGGCGCA TTGAGGACCTGAACCGCCAGGCCTCTGCCAACCGCGCGGAGATCGAACGCCTGCGCATGCTGCTGGAGTCCGACCGCGAG ATGGAGCCGGACCCATCCAACCTGCCCCCGATGCCGCTCACCTGCCGGCCGCCCGCCGTGGACGGGGAGGATGACGAGGA GATGAGCTCGGCCTGGGACGATTACGACGCCTGCGAGGCCTGTTACCGGGAACCCTTCCGGGAGCTTGATGATCTCCTGC TGAATTATGAGCGCCTGCGGATCATCTATATGAGCACGGCCGATTTCGTCAGCACCGCCATCACCATGGGCGACACCGTG CCAAAGCCCCATCAGTTCGTTGAAATGTCGTGGGCGCAGCAGAAGGCCGACATCCAGAAAAGCTTCCAGGGCACCAAGGA CGCCTACGATGCCAAACGGTCAGAGTTCAATGCGCAGATGACCGAAGTTCTCGACGAACTCGGCCGCTGCGAGGCCGAAC ACAACAACAATCCCATGTGGCGCTCCACCGAGGGCGAGATGTTCTACAGGACGATCAGGGCCAGTTATCAGAGGACGAAC TGA
Upstream 100 bases:
>100_bases ACCAGATACGCAGGTAGCGATTTTTAGTTGATCCCGAAGCTGGCCTGCGACACTTTGTCGGGCAAACTTGGCTTAACGGC AGACATCCAGGGGATTGCTG
Downstream 100 bases:
>100_bases TGTCTCATGTGCAGACGCTGCTGGCCGCCGCCAGCCTTATCCTGCTGGCTGCCTGTGGCGGCAGCGAAACGGCGCCCGCC ACTCCCGAAGCGCCTGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 560; Mature: 559
Protein sequence:
>560_residues MPHKRLLTGLMAGIFVAVAAFAEPATPPGDEVEAVKLDYGNRPDKDGQFASVEATVGDTPVRYYARGTNVSAPFSVQVIA ASLERPLEVTLHRQNWGKVVHSGSTGRAGSFVFEGRAHGDVGVQLTSPGGAPARATLVFWQGAPAAPSMARVYITPEMAD AGISATSQARDKAGGQGRGASPVLYVIAGLLAVIVVFLGVMMLRRGKGGAVAAVLIGGLMMASIHDPAPAYAQGEEAPPG GDAPNPFAVDKPLPEVPRDKDKDASAGKPDQAPNPFDVDKPLPDVPRDKDKDASAGKPEDKPEDSPPNPFAGEPTSSSGR PIDLKPEDFDPSNAPKDDASSEDAGSEDMGSEDAGPAPVDEDYGDRLAEADRRIEDLNRQASANRAEIERLRMLLESDRE MEPDPSNLPPMPLTCRPPAVDGEDDEEMSSAWDDYDACEACYREPFRELDDLLLNYERLRIIYMSTADFVSTAITMGDTV PKPHQFVEMSWAQQKADIQKSFQGTKDAYDAKRSEFNAQMTEVLDELGRCEAEHNNNPMWRSTEGEMFYRTIRASYQRTN
Sequences:
>Translated_560_residues MPHKRLLTGLMAGIFVAVAAFAEPATPPGDEVEAVKLDYGNRPDKDGQFASVEATVGDTPVRYYARGTNVSAPFSVQVIA ASLERPLEVTLHRQNWGKVVHSGSTGRAGSFVFEGRAHGDVGVQLTSPGGAPARATLVFWQGAPAAPSMARVYITPEMAD AGISATSQARDKAGGQGRGASPVLYVIAGLLAVIVVFLGVMMLRRGKGGAVAAVLIGGLMMASIHDPAPAYAQGEEAPPG GDAPNPFAVDKPLPEVPRDKDKDASAGKPDQAPNPFDVDKPLPDVPRDKDKDASAGKPEDKPEDSPPNPFAGEPTSSSGR PIDLKPEDFDPSNAPKDDASSEDAGSEDMGSEDAGPAPVDEDYGDRLAEADRRIEDLNRQASANRAEIERLRMLLESDRE MEPDPSNLPPMPLTCRPPAVDGEDDEEMSSAWDDYDACEACYREPFRELDDLLLNYERLRIIYMSTADFVSTAITMGDTV PKPHQFVEMSWAQQKADIQKSFQGTKDAYDAKRSEFNAQMTEVLDELGRCEAEHNNNPMWRSTEGEMFYRTIRASYQRTN >Mature_559_residues PHKRLLTGLMAGIFVAVAAFAEPATPPGDEVEAVKLDYGNRPDKDGQFASVEATVGDTPVRYYARGTNVSAPFSVQVIAA SLERPLEVTLHRQNWGKVVHSGSTGRAGSFVFEGRAHGDVGVQLTSPGGAPARATLVFWQGAPAAPSMARVYITPEMADA GISATSQARDKAGGQGRGASPVLYVIAGLLAVIVVFLGVMMLRRGKGGAVAAVLIGGLMMASIHDPAPAYAQGEEAPPGG DAPNPFAVDKPLPEVPRDKDKDASAGKPDQAPNPFDVDKPLPDVPRDKDKDASAGKPEDKPEDSPPNPFAGEPTSSSGRP IDLKPEDFDPSNAPKDDASSEDAGSEDMGSEDAGPAPVDEDYGDRLAEADRRIEDLNRQASANRAEIERLRMLLESDREM EPDPSNLPPMPLTCRPPAVDGEDDEEMSSAWDDYDACEACYREPFRELDDLLLNYERLRIIYMSTADFVSTAITMGDTVP KPHQFVEMSWAQQKADIQKSFQGTKDAYDAKRSEFNAQMTEVLDELGRCEAEHNNNPMWRSTEGEMFYRTIRASYQRTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60468; Mature: 60336
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS00457 NA_SOLUT_SYMP_2 ; PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHKRLLTGLMAGIFVAVAAFAEPATPPGDEVEAVKLDYGNRPDKDGQFASVEATVGDTP CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCC VRYYARGTNVSAPFSVQVIAASLERPLEVTLHRQNWGKVVHSGSTGRAGSFVFEGRAHGD EEEEECCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCCCEEECCCCCCC VGVQLTSPGGAPARATLVFWQGAPAAPSMARVYITPEMADAGISATSQARDKAGGQGRGA EEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEECCHHCCCCCHHHHHHHHCCCCCCCC SPVLYVIAGLLAVIVVFLGVMMLRRGKGGAVAAVLIGGLMMASIHDPAPAYAQGEEAPPG CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GDAPNPFAVDKPLPEVPRDKDKDASAGKPDQAPNPFDVDKPLPDVPRDKDKDASAGKPED CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KPEDSPPNPFAGEPTSSSGRPIDLKPEDFDPSNAPKDDASSEDAGSEDMGSEDAGPAPVD CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EDYGDRLAEADRRIEDLNRQASANRAEIERLRMLLESDREMEPDPSNLPPMPLTCRPPAV HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC DGEDDEEMSSAWDDYDACEACYREPFRELDDLLLNYERLRIIYMSTADFVSTAITMGDTV CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHCCCC PKPHQFVEMSWAQQKADIQKSFQGTKDAYDAKRSEFNAQMTEVLDELGRCEAEHNNNPMW CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE RSTEGEMFYRTIRASYQRTN ECCCHHHHHHHHHHHHHCCC >Mature Secondary Structure PHKRLLTGLMAGIFVAVAAFAEPATPPGDEVEAVKLDYGNRPDKDGQFASVEATVGDTP CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCC VRYYARGTNVSAPFSVQVIAASLERPLEVTLHRQNWGKVVHSGSTGRAGSFVFEGRAHGD EEEEECCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCCCEEECCCCCCC VGVQLTSPGGAPARATLVFWQGAPAAPSMARVYITPEMADAGISATSQARDKAGGQGRGA EEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEECCHHCCCCCHHHHHHHHCCCCCCCC SPVLYVIAGLLAVIVVFLGVMMLRRGKGGAVAAVLIGGLMMASIHDPAPAYAQGEEAPPG CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GDAPNPFAVDKPLPEVPRDKDKDASAGKPDQAPNPFDVDKPLPDVPRDKDKDASAGKPED CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KPEDSPPNPFAGEPTSSSGRPIDLKPEDFDPSNAPKDDASSEDAGSEDMGSEDAGPAPVD CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EDYGDRLAEADRRIEDLNRQASANRAEIERLRMLLESDREMEPDPSNLPPMPLTCRPPAV HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC DGEDDEEMSSAWDDYDACEACYREPFRELDDLLLNYERLRIIYMSTADFVSTAITMGDTV CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHCCCC PKPHQFVEMSWAQQKADIQKSFQGTKDAYDAKRSEFNAQMTEVLDELGRCEAEHNNNPMW CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE RSTEGEMFYRTIRASYQRTN ECCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA