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The map label for this gene is ywdK [H]

Identifier: 114799845

GI number: 114799845

Start: 3086093

End: 3086476

Strand: Direct

Name: ywdK [H]

Synonym: HNE_2928

Alternate gene names: 114799845

Gene position: 3086093-3086476 (Clockwise)

Preceding gene: 114800348

Following gene: 114798234

Centisome position: 83.29

GC content: 68.75

Gene sequence:

>384_bases
ATGATCCGGCTGATTCCGGCTGCTGCCCTGTTTGGCTTTCTGTCTGTCGCATTCGGCGCGTTTGGTGCGCATGCGCTGGA
GGGCGCGCTGACTGGCGAAGGCACGCAATGGTGGCAGACGGCAACGCTGTACGGCCTCACCCATGCGGGCGCGGCTCTGG
CGGCGGGGCTTTCGGGCAGAGGCGGCAAGATCGCGGCCGGCGGCTGGCTGATGCTGGGTGGCGCGGTGATCTTTGCAGGC
ACGCTTTACGCCATGGCGCTGGGCGCGCCGCGCTGGTTTGGCGCGATTACGCCGGTGGGCGGTATCGGCATGCTGGCAGG
CTGGGTGATGATCGGGCTGGGCGGGCTCGCCTCAGCGGGCCGGGCTCAGGACGAAACGCCGTAA

Upstream 100 bases:

>100_bases
GATGTGCGCATTGAGCACGCTGACAAGCCATCGAGCCACGCTATCGTGACCTATGCCCTGCCCCGGAAGGGCTGAGCTGT
CACCATTACGAGGCCCCGTC

Downstream 100 bases:

>100_bases
GAGCCGGTATACCGCTCGGCCAGATCGTCAGCGACGCGGCGGGCTTCATCAATGGAGTCGGAAAACGCGTTCAGTTCTGC
CTTGATGGGTGAGACATCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MIRLIPAAALFGFLSVAFGAFGAHALEGALTGEGTQWWQTATLYGLTHAGAALAAGLSGRGGKIAAGGWLMLGGAVIFAG
TLYAMALGAPRWFGAITPVGGIGMLAGWVMIGLGGLASAGRAQDETP

Sequences:

>Translated_127_residues
MIRLIPAAALFGFLSVAFGAFGAHALEGALTGEGTQWWQTATLYGLTHAGAALAAGLSGRGGKIAAGGWLMLGGAVIFAG
TLYAMALGAPRWFGAITPVGGIGMLAGWVMIGLGGLASAGRAQDETP
>Mature_127_residues
MIRLIPAAALFGFLSVAFGAFGAHALEGALTGEGTQWWQTATLYGLTHAGAALAAGLSGRGGKIAAGGWLMLGGAVIFAG
TLYAMALGAPRWFGAITPVGGIGMLAGWVMIGLGGLASAGRAQDETP

Specific function: Unknown

COG id: COG2363

COG function: function code S; Uncharacterized small membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0382 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006696 [H]

Pfam domain/function: PF04241 DUF423 [H]

EC number: NA

Molecular weight: Translated: 12575; Mature: 12575

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLIPAAALFGFLSVAFGAFGAHALEGALTGEGTQWWQTATLYGLTHAGAALAAGLSGR
CEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
GGKIAAGGWLMLGGAVIFAGTLYAMALGAPRWFGAITPVGGIGMLAGWVMIGLGGLASAG
CCEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
RAQDETP
CCCCCCC
>Mature Secondary Structure
MIRLIPAAALFGFLSVAFGAFGAHALEGALTGEGTQWWQTATLYGLTHAGAALAAGLSGR
CEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
GGKIAAGGWLMLGGAVIFAGTLYAMALGAPRWFGAITPVGGIGMLAGWVMIGLGGLASAG
CCEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
RAQDETP
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]