| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799742
Identifier: 114799742
GI number: 114799742
Start: 818133
End: 820280
Strand: Direct
Name: 114799742
Synonym: HNE_0803
Alternate gene names: NA
Gene position: 818133-820280 (Clockwise)
Preceding gene: 114798665
Following gene: 114800116
Centisome position: 22.08
GC content: 46.93
Gene sequence:
>2148_bases ATGACCGCAATCGAAAAGCGTGTTCCGGAGTCGGTTCTTGCCATCGTTTGGGCACTATTTCTTTCGATTACTACCTATTA TCGAGCGGATGGCTCAATTTACCCACTGATACAAGCGGACGAAGGCGTCAACGTTGCTTTGGCCGCAGCATTTGCAGGGT TTGAAAACGACCTTGCTACGGATCGAAGCCTCGGCTACGCAATTTTGCTATCTCCCGCATTCTGGTTCTCAGAAGAACCA AATGAGATTTGGAGAAACATACGCATCATCAACGCGTGTTTGTTAGGAGTCGCTGCGGTTCTTTTGCATCGACTCTCCAT GCTACTCTTTCCAGTTGATCTAAAAGTTTATCGTTTGGCGGCAGTCGTTGTAACTTCGCTTTATCCGATGGGCGTGACGC TTTCCACATATGCGTTCGCTCAAACCGCGCTTGCCCCACTCTTTCTGCTGACATGTATATTTGTCATAAAAGTGTTGGCT AGCTCAATATCCGTCTTTTCGATTGGGCTGGGATTGATTGCTGGAATCATTTTCTGGCAGCACCCCACCGGCGCCCTGGT TGTGATTTCGACTCTATGTTTTGCGACATACATTGGAGTTGCTTTGAATCGATGGAAGTCTGCGCTTTGGATCGTCATCG GCCTGACAATTAGTCTTGGGACATACAAATTTGCTTTGAAGCCATTTGCTGAAAGAATGACGTCATCGGTCGGCAGAGCA GAGGTGGCTGGCTATGGAAGTTCGCTACGGTTGCTCGATCCGCTGAAAACCGCTGAAGGCTGGTCGTATGTTTTCCAAAT CTCAAACGGGCATTTGTATTACTTAATAACTGCCTCTTTAGGGCTCGCGGCAGTTGGCGTGGTCCTTTCAGGAATATGTG TTTCGCGTTTCCGCTGGACAAGCAAAGTAACACGCGAGCTTAAAAAGCAGGTTGGCTATAACGGGTTCCTGTTGGTTGTG CTTCTAGGTGTAGCGTTTGTATCCGTATTGAACTTCGCGGTAGTTGGCAGTGCTATGCGAGCAGATCAGTTAATGTATGG TCGATATTTGGAACCGTATATTTTGCCATTTGTGCTTTCCGGAATCCTTGGTTTTCGTCAAAAATATATATTGGCAGTGT TAATCGCGGCCAGCGCGAGCGGGCTGTATTTAGCTACGTACATTGATACCAAAGCTCATTTTGCACCGTTCAATGTTTCA GCCCTATGGCAATACTTCAGTCTAAAACAGAACGGATTTTCGATGTGGTTGGCGACCGGATTGGGTCTCGTCGCAATTGT TGCATATGCCCCTCGAAGAATAGGTGTGTTGCTCACTGCAAGCATCTTTCTATTCGCTAGTCATGAGCAAGTAGCCTGGA GAGAGAGGGCGACGTCGAATGTGCCAAAGAGGTTGGAGCCTGCTCTTTGGATCAGAGAGAACGTCAAATCGAATACTTGC ATTGGATTTGATCGAGAGGATCTTAGAAGAGGTCGCCACTTAACGACTTGGTTTGATAGCCATTTTATATTCTATGATAG AAATTTTCAGGCAATGTATTTCGACACTTGGGTCGAGAATTGCCCTGATGGTCTGTTTTTCTCGTCCAATCATGAGTTGG ATAAGGAACATACACAACTGGTCAGATTTGGCCGTCCAGGTCCCAACATGCCTTCACTCTGGTGGCGAAGGGACAAAATT CGTAGTGACGGATACCCCTTCTCTCCTTCATCATCATCGTCATCAGAGTTAACACGAATTCTTGGGCAAGGTTGGTATAA TAACGAGCTGAAGCACATATGGTCTGCCGAATTGGCTGATTTGACAGTGCCTGTGCCGGAGCGATGCGCGACTGCTCAAT GCGTCATCGAATTGGATCTGAATCCATTCGCGCCCACTGAACTCAGGCCTGTTGAAGTAATAATAAGCTGGAACCAACGT CAAAGTTTGCAAACCGCGACTTGGGTCTTTAGGAAACCCAATGAACATTTAATTCAGATTCCGTTAGATTCAGAAGACTA CTTTGAAAGGCTGAAGATAATGGTGCCGCAAGCGGTTCGCCCTTCTGATTTTGGTAATAGCAAAGACGCCCGCAGACTGG GGGTCGCACTCCGCGAAGTGCGACTAATAGTACTTCCAAACCAAGATGCGACGAATAAACTTGATTGA
Upstream 100 bases:
>100_bases GAAAGAAAGGCGAACAGAGACTACAATTAAGCGGCCCGGATCAGGGGGCTGGGTCACGGGTGAAAAAATCAATTTGGTTT TTCTGGGGGGATAGAAGAAC
Downstream 100 bases:
>100_bases GATTGAAAGTAGCTCAGTTCTTTCACATTTATACGGGTATGCGCGATCTGTTTGTACAGGCTTTGTAAGCAGACTCCCAT AAGCTAAGAGCTTGATCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 715; Mature: 714
Protein sequence:
>715_residues MTAIEKRVPESVLAIVWALFLSITTYYRADGSIYPLIQADEGVNVALAAAFAGFENDLATDRSLGYAILLSPAFWFSEEP NEIWRNIRIINACLLGVAAVLLHRLSMLLFPVDLKVYRLAAVVVTSLYPMGVTLSTYAFAQTALAPLFLLTCIFVIKVLA SSISVFSIGLGLIAGIIFWQHPTGALVVISTLCFATYIGVALNRWKSALWIVIGLTISLGTYKFALKPFAERMTSSVGRA EVAGYGSSLRLLDPLKTAEGWSYVFQISNGHLYYLITASLGLAAVGVVLSGICVSRFRWTSKVTRELKKQVGYNGFLLVV LLGVAFVSVLNFAVVGSAMRADQLMYGRYLEPYILPFVLSGILGFRQKYILAVLIAASASGLYLATYIDTKAHFAPFNVS ALWQYFSLKQNGFSMWLATGLGLVAIVAYAPRRIGVLLTASIFLFASHEQVAWRERATSNVPKRLEPALWIRENVKSNTC IGFDREDLRRGRHLTTWFDSHFIFYDRNFQAMYFDTWVENCPDGLFFSSNHELDKEHTQLVRFGRPGPNMPSLWWRRDKI RSDGYPFSPSSSSSSELTRILGQGWYNNELKHIWSAELADLTVPVPERCATAQCVIELDLNPFAPTELRPVEVIISWNQR QSLQTATWVFRKPNEHLIQIPLDSEDYFERLKIMVPQAVRPSDFGNSKDARRLGVALREVRLIVLPNQDATNKLD
Sequences:
>Translated_715_residues MTAIEKRVPESVLAIVWALFLSITTYYRADGSIYPLIQADEGVNVALAAAFAGFENDLATDRSLGYAILLSPAFWFSEEP NEIWRNIRIINACLLGVAAVLLHRLSMLLFPVDLKVYRLAAVVVTSLYPMGVTLSTYAFAQTALAPLFLLTCIFVIKVLA SSISVFSIGLGLIAGIIFWQHPTGALVVISTLCFATYIGVALNRWKSALWIVIGLTISLGTYKFALKPFAERMTSSVGRA EVAGYGSSLRLLDPLKTAEGWSYVFQISNGHLYYLITASLGLAAVGVVLSGICVSRFRWTSKVTRELKKQVGYNGFLLVV LLGVAFVSVLNFAVVGSAMRADQLMYGRYLEPYILPFVLSGILGFRQKYILAVLIAASASGLYLATYIDTKAHFAPFNVS ALWQYFSLKQNGFSMWLATGLGLVAIVAYAPRRIGVLLTASIFLFASHEQVAWRERATSNVPKRLEPALWIRENVKSNTC IGFDREDLRRGRHLTTWFDSHFIFYDRNFQAMYFDTWVENCPDGLFFSSNHELDKEHTQLVRFGRPGPNMPSLWWRRDKI RSDGYPFSPSSSSSSELTRILGQGWYNNELKHIWSAELADLTVPVPERCATAQCVIELDLNPFAPTELRPVEVIISWNQR QSLQTATWVFRKPNEHLIQIPLDSEDYFERLKIMVPQAVRPSDFGNSKDARRLGVALREVRLIVLPNQDATNKLD >Mature_714_residues TAIEKRVPESVLAIVWALFLSITTYYRADGSIYPLIQADEGVNVALAAAFAGFENDLATDRSLGYAILLSPAFWFSEEPN EIWRNIRIINACLLGVAAVLLHRLSMLLFPVDLKVYRLAAVVVTSLYPMGVTLSTYAFAQTALAPLFLLTCIFVIKVLAS SISVFSIGLGLIAGIIFWQHPTGALVVISTLCFATYIGVALNRWKSALWIVIGLTISLGTYKFALKPFAERMTSSVGRAE VAGYGSSLRLLDPLKTAEGWSYVFQISNGHLYYLITASLGLAAVGVVLSGICVSRFRWTSKVTRELKKQVGYNGFLLVVL LGVAFVSVLNFAVVGSAMRADQLMYGRYLEPYILPFVLSGILGFRQKYILAVLIAASASGLYLATYIDTKAHFAPFNVSA LWQYFSLKQNGFSMWLATGLGLVAIVAYAPRRIGVLLTASIFLFASHEQVAWRERATSNVPKRLEPALWIRENVKSNTCI GFDREDLRRGRHLTTWFDSHFIFYDRNFQAMYFDTWVENCPDGLFFSSNHELDKEHTQLVRFGRPGPNMPSLWWRRDKIR SDGYPFSPSSSSSSELTRILGQGWYNNELKHIWSAELADLTVPVPERCATAQCVIELDLNPFAPTELRPVEVIISWNQRQ SLQTATWVFRKPNEHLIQIPLDSEDYFERLKIMVPQAVRPSDFGNSKDARRLGVALREVRLIVLPNQDATNKLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80093; Mature: 79962
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIEKRVPESVLAIVWALFLSITTYYRADGSIYPLIQADEGVNVALAAAFAGFENDLAT CCCHHHHCHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCEEEHHHHHCCCCCCCC DRSLGYAILLSPAFWFSEEPNEIWRNIRIINACLLGVAAVLLHRLSMLLFPVDLKVYRLA CCCCCEEEEECCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AVVVTSLYPMGVTLSTYAFAQTALAPLFLLTCIFVIKVLASSISVFSIGLGLIAGIIFWQ HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE HPTGALVVISTLCFATYIGVALNRWKSALWIVIGLTISLGTYKFALKPFAERMTSSVGRA CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCH EVAGYGSSLRLLDPLKTAEGWSYVFQISNGHLYYLITASLGLAAVGVVLSGICVSRFRWT HHHCCCCCCEEECCHHCCCCCEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH SKVTRELKKQVGYNGFLLVVLLGVAFVSVLNFAVVGSAMRADQLMYGRYLEPYILPFVLS HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH GILGFRQKYILAVLIAASASGLYLATYIDTKAHFAPFNVSALWQYFSLKQNGFSMWLATG HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH LGLVAIVAYAPRRIGVLLTASIFLFASHEQVAWRERATSNVPKRLEPALWIRENVKSNTC HHHHHHHHHCCHHHHHHHEEHHHEEECCCHHHHHHHHHCCCCHHCCCHHHHHHCCCCCCE IGFDREDLRRGRHLTTWFDSHFIFYDRNFQAMYFDTWVENCPDGLFFSSNHELDKEHTQL ECCCHHHHHCCCCEEEEECCEEEEEECCCEEEEEEHHHHHCCCCCEECCCCCCCHHHHHH VRFGRPGPNMPSLWWRRDKIRSDGYPFSPSSSSSSELTRILGQGWYNNELKHIWSAELAD HHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHC LTVPVPERCATAQCVIELDLNPFAPTELRPVEVIISWNQRQSLQTATWVFRKPNEHLIQI CCCCCCHHCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHEEECCCCCEEEE PLDSEDYFERLKIMVPQAVRPSDFGNSKDARRLGVALREVRLIVLPNQDATNKLD ECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCC >Mature Secondary Structure TAIEKRVPESVLAIVWALFLSITTYYRADGSIYPLIQADEGVNVALAAAFAGFENDLAT CCHHHHCHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCEEEHHHHHCCCCCCCC DRSLGYAILLSPAFWFSEEPNEIWRNIRIINACLLGVAAVLLHRLSMLLFPVDLKVYRLA CCCCCEEEEECCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AVVVTSLYPMGVTLSTYAFAQTALAPLFLLTCIFVIKVLASSISVFSIGLGLIAGIIFWQ HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE HPTGALVVISTLCFATYIGVALNRWKSALWIVIGLTISLGTYKFALKPFAERMTSSVGRA CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCH EVAGYGSSLRLLDPLKTAEGWSYVFQISNGHLYYLITASLGLAAVGVVLSGICVSRFRWT HHHCCCCCCEEECCHHCCCCCEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH SKVTRELKKQVGYNGFLLVVLLGVAFVSVLNFAVVGSAMRADQLMYGRYLEPYILPFVLS HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH GILGFRQKYILAVLIAASASGLYLATYIDTKAHFAPFNVSALWQYFSLKQNGFSMWLATG HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH LGLVAIVAYAPRRIGVLLTASIFLFASHEQVAWRERATSNVPKRLEPALWIRENVKSNTC HHHHHHHHHCCHHHHHHHEEHHHEEECCCHHHHHHHHHCCCCHHCCCHHHHHHCCCCCCE IGFDREDLRRGRHLTTWFDSHFIFYDRNFQAMYFDTWVENCPDGLFFSSNHELDKEHTQL ECCCHHHHHCCCCEEEEECCEEEEEECCCEEEEEEHHHHHCCCCCEECCCCCCCHHHHHH VRFGRPGPNMPSLWWRRDKIRSDGYPFSPSSSSSSELTRILGQGWYNNELKHIWSAELAD HHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHC LTVPVPERCATAQCVIELDLNPFAPTELRPVEVIISWNQRQSLQTATWVFRKPNEHLIQI CCCCCCHHCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHEEECCCCCEEEE PLDSEDYFERLKIMVPQAVRPSDFGNSKDARRLGVALREVRLIVLPNQDATNKLD ECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA