| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is menB [C]
Identifier: 114799733
GI number: 114799733
Start: 2251987
End: 2252895
Strand: Reverse
Name: menB [C]
Synonym: HNE_2166
Alternate gene names: 114799733
Gene position: 2252895-2251987 (Counterclockwise)
Preceding gene: 114799121
Following gene: 114798747
Centisome position: 60.81
GC content: 60.73
Gene sequence:
>909_bases ATGGCACGGCCCAAGGAATTCAAGGAAATCATTCTCGACATCGAGGACGGCGTCGCCACCCTCACGCTGCACCGTCCCGA CAACATGAACGCTTTCACCGGCACCATGATGTACGAAATGATCGAAGCCTTCGACATCACCGACGCCAATGACGATGTGA AGGTCGTCATTGTGACCGGCCATGGCGACCGCGCTTTCTGCGCCGGCGCAGACCTCTCTGCAGGTGCCAAGACGTTCGAC TATGACGCCCGCGCAGGCGACGGCGAAAAGGGCCGTACCGAGTCGATTGACGTTCAGCGTGATGGCGGCGGCCGCGTTAC CCTGCGCATCTTCGAAAGTCTTAAGCCCGTAATCGGCGCCATCAACGGCGCGGCTGTCGGTATCGGCGTGACGATGCAGC TGCCGATGGATATTCGCATTGCGTCTGACAAGGCCCGCTTCGGCTTCGTGTTCAATCGCCGGGGCATTAACCCGGAAGCG GCGTCCAGCTGGTTCCTGCCGCGCCTTGTCGGCATCCAGCAGGCGCTGGAATGGTGCTACACCGGCCGCGTCTTCCCGGC GGATGAAGCCCTCAAGGGCGGCCTTGTGAGCAAAGTTGTTCCGCATGCAGACCTGATGAGCGAAGCGCGCAAACTTGCCC GCGAGATCGCCGACAATACCGCGCCGGTTTCCAACGCACTGACCCGCCAGATGATGTGGCGCATGCTGGGCGCGAGCCAT CCGATGGAAGCGCACATCGTGGATTCCGCGGCCATCTATACTCGTGGCAAAACACCAGATGCCAAAGAAGGCGTGATGAG CTTCCTCGAGAAGCGCCAGCCGACCTATCCGGTCAAAGTGTCGGATGGCATGCCCGGCTTCTTCCCCTGGTGGGACGAGA AGGAATTCGAGTGGATCGGCAACAAGTGA
Upstream 100 bases:
>100_bases GTGGTGGGGGCTGCCGCGTCAAGCACCTCGGCGCGCTTGACGAACCTAAGGGAAGGAGGGCCTTCTCAGGCGGGAAACAC ATCACTGGAGGAAATTGACG
Downstream 100 bases:
>100_bases TTTCAGCGGCAAAGGGGCAGTAGGGCCATGCAGACTTTATTGCCTCTTGCCGCCGAGATTGGCGACATCCTGAAGGCGCG GCGGGAAACCGTCGCGATTT
Product: enoyl-CoA hydratase/isomerase family protein
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MARPKEFKEIILDIEDGVATLTLHRPDNMNAFTGTMMYEMIEAFDITDANDDVKVVIVTGHGDRAFCAGADLSAGAKTFD YDARAGDGEKGRTESIDVQRDGGGRVTLRIFESLKPVIGAINGAAVGIGVTMQLPMDIRIASDKARFGFVFNRRGINPEA ASSWFLPRLVGIQQALEWCYTGRVFPADEALKGGLVSKVVPHADLMSEARKLAREIADNTAPVSNALTRQMMWRMLGASH PMEAHIVDSAAIYTRGKTPDAKEGVMSFLEKRQPTYPVKVSDGMPGFFPWWDEKEFEWIGNK
Sequences:
>Translated_302_residues MARPKEFKEIILDIEDGVATLTLHRPDNMNAFTGTMMYEMIEAFDITDANDDVKVVIVTGHGDRAFCAGADLSAGAKTFD YDARAGDGEKGRTESIDVQRDGGGRVTLRIFESLKPVIGAINGAAVGIGVTMQLPMDIRIASDKARFGFVFNRRGINPEA ASSWFLPRLVGIQQALEWCYTGRVFPADEALKGGLVSKVVPHADLMSEARKLAREIADNTAPVSNALTRQMMWRMLGASH PMEAHIVDSAAIYTRGKTPDAKEGVMSFLEKRQPTYPVKVSDGMPGFFPWWDEKEFEWIGNK >Mature_301_residues ARPKEFKEIILDIEDGVATLTLHRPDNMNAFTGTMMYEMIEAFDITDANDDVKVVIVTGHGDRAFCAGADLSAGAKTFDY DARAGDGEKGRTESIDVQRDGGGRVTLRIFESLKPVIGAINGAAVGIGVTMQLPMDIRIASDKARFGFVFNRRGINPEAA SSWFLPRLVGIQQALEWCYTGRVFPADEALKGGLVSKVVPHADLMSEARKLAREIADNTAPVSNALTRQMMWRMLGASHP MEAHIVDSAAIYTRGKTPDAKEGVMSFLEKRQPTYPVKVSDGMPGFFPWWDEKEFEWIGNK
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI31542718, Length=281, Percent_Identity=29.8932384341637, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI260274832, Length=269, Percent_Identity=26.3940520446097, Blast_Score=98, Evalue=8e-21, Organism=Homo sapiens, GI45643119, Length=269, Percent_Identity=26.3940520446097, Blast_Score=98, Evalue=8e-21, Organism=Homo sapiens, GI260275230, Length=269, Percent_Identity=26.3940520446097, Blast_Score=98, Evalue=8e-21, Organism=Homo sapiens, GI194097323, Length=264, Percent_Identity=29.9242424242424, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI116235487, Length=234, Percent_Identity=29.4871794871795, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI68989263, Length=208, Percent_Identity=29.3269230769231, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI4757968, Length=247, Percent_Identity=27.1255060728745, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI49355787, Length=247, Percent_Identity=27.1255060728745, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI70995211, Length=216, Percent_Identity=30.5555555555556, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI4502327, Length=266, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI221136756, Length=245, Percent_Identity=27.3469387755102, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI221136753, Length=245, Percent_Identity=27.3469387755102, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI4757966, Length=212, Percent_Identity=26.4150943396226, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI51538581, Length=212, Percent_Identity=26.4150943396226, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI25453481, Length=212, Percent_Identity=26.4150943396226, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI51538573, Length=212, Percent_Identity=26.4150943396226, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI221307494, Length=245, Percent_Identity=27.3469387755102, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI37594471, Length=164, Percent_Identity=25, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI37594469, Length=164, Percent_Identity=25, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI20127408, Length=192, Percent_Identity=26.5625, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI1788597, Length=261, Percent_Identity=30.6513409961686, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI221142681, Length=264, Percent_Identity=32.5757575757576, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI1787660, Length=277, Percent_Identity=32.4909747292419, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1787659, Length=271, Percent_Identity=28.0442804428044, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1788682, Length=237, Percent_Identity=26.5822784810127, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1790281, Length=202, Percent_Identity=28.7128712871287, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI87082183, Length=269, Percent_Identity=23.4200743494424, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17554946, Length=268, Percent_Identity=30.9701492537313, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17549921, Length=223, Percent_Identity=30.4932735426009, Blast_Score=104, Evalue=6e-23, Organism=Caenorhabditis elegans, GI25145438, Length=264, Percent_Identity=31.8181818181818, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI17535521, Length=262, Percent_Identity=28.2442748091603, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17540714, Length=211, Percent_Identity=32.2274881516588, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17560910, Length=206, Percent_Identity=29.6116504854369, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI25144157, Length=215, Percent_Identity=25.5813953488372, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI25144160, Length=215, Percent_Identity=25.5813953488372, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17534483, Length=273, Percent_Identity=27.8388278388278, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17536985, Length=268, Percent_Identity=24.6268656716418, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6320241, Length=209, Percent_Identity=25.8373205741627, Blast_Score=80, Evalue=4e-16, Organism=Drosophila melanogaster, GI20129971, Length=268, Percent_Identity=31.7164179104478, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI24653477, Length=268, Percent_Identity=31.7164179104478, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI24653139, Length=269, Percent_Identity=31.2267657992565, Blast_Score=98, Evalue=9e-21, Organism=Drosophila melanogaster, GI19920382, Length=223, Percent_Identity=32.2869955156951, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI21357171, Length=211, Percent_Identity=28.9099526066351, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24654903, Length=268, Percent_Identity=23.134328358209, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24650670, Length=211, Percent_Identity=28.9099526066351, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 33263; Mature: 33132
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPKEFKEIILDIEDGVATLTLHRPDNMNAFTGTMMYEMIEAFDITDANDDVKVVIVTG CCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC HGDRAFCAGADLSAGAKTFDYDARAGDGEKGRTESIDVQRDGGGRVTLRIFESLKPVIGA CCCCEEEECCCCCCCCCEECCCCCCCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHC INGAAVGIGVTMQLPMDIRIASDKARFGFVFNRRGINPEAASSWFLPRLVGIQQALEWCY CCCCEEEEEEEEECCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH TGRVFPADEALKGGLVSKVVPHADLMSEARKLAREIADNTAPVSNALTRQMMWRMLGASH CCCCCCCHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC PMEAHIVDSAAIYTRGKTPDAKEGVMSFLEKRQPTYPVKVSDGMPGFFPWWDEKEFEWIG CCEEEEECCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCC NK CC >Mature Secondary Structure ARPKEFKEIILDIEDGVATLTLHRPDNMNAFTGTMMYEMIEAFDITDANDDVKVVIVTG CCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC HGDRAFCAGADLSAGAKTFDYDARAGDGEKGRTESIDVQRDGGGRVTLRIFESLKPVIGA CCCCEEEECCCCCCCCCEECCCCCCCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHC INGAAVGIGVTMQLPMDIRIASDKARFGFVFNRRGINPEAASSWFLPRLVGIQQALEWCY CCCCEEEEEEEEECCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH TGRVFPADEALKGGLVSKVVPHADLMSEARKLAREIADNTAPVSNALTRQMMWRMLGASH CCCCCCCHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC PMEAHIVDSAAIYTRGKTPDAKEGVMSFLEKRQPTYPVKVSDGMPGFFPWWDEKEFEWIG CCEEEEECCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCC NK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA