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The map label for this gene is yncB [H]

Identifier: 114799720

GI number: 114799720

Start: 1444779

End: 1445804

Strand: Direct

Name: yncB [H]

Synonym: HNE_1415

Alternate gene names: 114799720

Gene position: 1444779-1445804 (Clockwise)

Preceding gene: 114800511

Following gene: 114799730

Centisome position: 39.0

GC content: 64.13

Gene sequence:

>1026_bases
ATGGTCAACGAAAAGAACCTGACATGGGTGCTGCGCAAGCGGCCCGTCGGCGATCTGCAACAGGGCGACCTGGAGCTGGT
CGAAAGCGCGCTCACCCAGCTCGAAGACGGGCAGGTGCGCGCCAAGACCATCTACCTCTCGCTCGATCCCACCAACCGCA
TCTGGATGAGCGATGTGGACGCCTACCTGCCGCCCGTCGGCATCGGTGACGCCATGCGCGGCGGCGGCCTCAGCGTCATC
ACCGAGAGCCGCTTTGACGGCCTTGAGCCCGGCGACATCGTCAATACCGGCCTCGCCGGCTGGGCGATCTACAACACGCT
GCCGGGCGCCTCGCTCGCCAAGCTGCCCAAGCTCCCCGGCGTCCCGCTCACAGCCTTCATGGGGCCCCTCGGCGCCACCG
GCATGACCGCCTATTTCGGCCTGATGGACATCGCCAAGCCCAAAGCGGGCGAAACCGTTGTCGTCTCCGCCGCGGCCGGC
GCCGTCGGCTCGATGGTCGGCCAGATCGCCAAGATCCAGGGCTGCCGCGTTGTCGGCATCGCAGGCGGCGCAGACAAATG
CCGCTGGCTCACCGAAACGGCCGGCTTCGACGCCGCCATCGACTACAAGAACGAAGACGTCGGCAAGGCCCTCGACAAGC
ATTGTCCAAACGGCATCGACATCAACTTCGAGAATGTCGGCGGCAAGATCATGGACGAAGTCATCGCCCGCCTGAACGAC
TTCTCGCGCATGCCGCTCTGCGGCCTCATCTCCACCTACAACGCCACAGACCCCGTGCCCGGCCCCTACAACTTCTCAAA
CCTCCTGATGCGGCGCACGCTGGTGAAAGGCTTCATCGTCATCGACTATTTCCCCCGCTTCCCGGAGGGCATGCAGCAGA
TGGCGCAGTGGTTCATGGAGGGGAAACTCAAATACGAGACCGACATCGTCGACGGTTTCGAGAAAGCCCCCGCCAGCCTC
TCGCGCCTCTTCGAGGGCAAAAATCTCGGCAAACTCGTCGTCCAGGTCAGCCCCGAGCCGGTTTAA

Upstream 100 bases:

>100_bases
GCAGCGTTCCTGGCCTATGCCTACTGGCAATCCCGCCGCGGCGTCTTGCGCTGAGCCGGATTCCCACTAGCCTCCCGGCC
GAAAGTCTAGGGAGGACAAC

Downstream 100 bases:

>100_bases
GCCTCCGGTTCAGCTTGCATTCATTTCCCGCATTACCAAACTGTCATCAGCAGGTTGGTGGGAGGTGACACATGCTGAGA
CGAGTGACGGGGACCGCGCG

Product: L4BD family NADP-dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MVNEKNLTWVLRKRPVGDLQQGDLELVESALTQLEDGQVRAKTIYLSLDPTNRIWMSDVDAYLPPVGIGDAMRGGGLSVI
TESRFDGLEPGDIVNTGLAGWAIYNTLPGASLAKLPKLPGVPLTAFMGPLGATGMTAYFGLMDIAKPKAGETVVVSAAAG
AVGSMVGQIAKIQGCRVVGIAGGADKCRWLTETAGFDAAIDYKNEDVGKALDKHCPNGIDINFENVGGKIMDEVIARLND
FSRMPLCGLISTYNATDPVPGPYNFSNLLMRRTLVKGFIVIDYFPRFPEGMQQMAQWFMEGKLKYETDIVDGFEKAPASL
SRLFEGKNLGKLVVQVSPEPV

Sequences:

>Translated_341_residues
MVNEKNLTWVLRKRPVGDLQQGDLELVESALTQLEDGQVRAKTIYLSLDPTNRIWMSDVDAYLPPVGIGDAMRGGGLSVI
TESRFDGLEPGDIVNTGLAGWAIYNTLPGASLAKLPKLPGVPLTAFMGPLGATGMTAYFGLMDIAKPKAGETVVVSAAAG
AVGSMVGQIAKIQGCRVVGIAGGADKCRWLTETAGFDAAIDYKNEDVGKALDKHCPNGIDINFENVGGKIMDEVIARLND
FSRMPLCGLISTYNATDPVPGPYNFSNLLMRRTLVKGFIVIDYFPRFPEGMQQMAQWFMEGKLKYETDIVDGFEKAPASL
SRLFEGKNLGKLVVQVSPEPV
>Mature_341_residues
MVNEKNLTWVLRKRPVGDLQQGDLELVESALTQLEDGQVRAKTIYLSLDPTNRIWMSDVDAYLPPVGIGDAMRGGGLSVI
TESRFDGLEPGDIVNTGLAGWAIYNTLPGASLAKLPKLPGVPLTAFMGPLGATGMTAYFGLMDIAKPKAGETVVVSAAAG
AVGSMVGQIAKIQGCRVVGIAGGADKCRWLTETAGFDAAIDYKNEDVGKALDKHCPNGIDINFENVGGKIMDEVIARLND
FSRMPLCGLISTYNATDPVPGPYNFSNLLMRRTLVKGFIVIDYFPRFPEGMQQMAQWFMEGKLKYETDIVDGFEKAPASL
SRLFEGKNLGKLVVQVSPEPV

Specific function: Unknown

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226246682, Length=315, Percent_Identity=39.6825396825397, Blast_Score=225, Evalue=5e-59,
Organism=Homo sapiens, GI226246680, Length=315, Percent_Identity=39.6825396825397, Blast_Score=225, Evalue=5e-59,
Organism=Homo sapiens, GI22748929, Length=315, Percent_Identity=39.6825396825397, Blast_Score=225, Evalue=5e-59,
Organism=Homo sapiens, GI226059159, Length=339, Percent_Identity=37.1681415929204, Blast_Score=205, Evalue=4e-53,
Organism=Homo sapiens, GI226059133, Length=339, Percent_Identity=37.1681415929204, Blast_Score=205, Evalue=4e-53,
Organism=Homo sapiens, GI226056130, Length=308, Percent_Identity=36.038961038961, Blast_Score=176, Evalue=4e-44,
Organism=Homo sapiens, GI28557745, Length=247, Percent_Identity=29.5546558704453, Blast_Score=110, Evalue=2e-24,
Organism=Escherichia coli, GI226510941, Length=340, Percent_Identity=45.8823529411765, Blast_Score=289, Evalue=2e-79,
Organism=Caenorhabditis elegans, GI133901710, Length=317, Percent_Identity=35.9621451104101, Blast_Score=173, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI133901712, Length=317, Percent_Identity=35.9621451104101, Blast_Score=173, Evalue=1e-43,
Organism=Saccharomyces cerevisiae, GI6323504, Length=361, Percent_Identity=29.3628808864266, Blast_Score=134, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36738; Mature: 36738

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNEKNLTWVLRKRPVGDLQQGDLELVESALTQLEDGQVRAKTIYLSLDPTNRIWMSDVD
CCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEHHHHH
AYLPPVGIGDAMRGGGLSVITESRFDGLEPGDIVNTGLAGWAIYNTLPGASLAKLPKLPG
HHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHCCCHHHHHHHCCCCCHHHHCCCCCC
VPLTAFMGPLGATGMTAYFGLMDIAKPKAGETVVVSAAAGAVGSMVGQIAKIQGCRVVGI
CCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEEE
AGGADKCRWLTETAGFDAAIDYKNEDVGKALDKHCPNGIDINFENVGGKIMDEVIARLND
CCCCHHHHEEHHCCCCCEEECCCCCHHHHHHHHHCCCCCEEEHHHCCHHHHHHHHHHHHH
FSRMPLCGLISTYNATDPVPGPYNFSNLLMRRTLVKGFIVIDYFPRFPEGMQQMAQWFME
CCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHC
GKLKYETDIVDGFEKAPASLSRLFEGKNLGKLVVQVSPEPV
CCCEEEHHHHHHHHHCHHHHHHHHCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MVNEKNLTWVLRKRPVGDLQQGDLELVESALTQLEDGQVRAKTIYLSLDPTNRIWMSDVD
CCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEHHHHH
AYLPPVGIGDAMRGGGLSVITESRFDGLEPGDIVNTGLAGWAIYNTLPGASLAKLPKLPG
HHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHCCCHHHHHHHCCCCCHHHHCCCCCC
VPLTAFMGPLGATGMTAYFGLMDIAKPKAGETVVVSAAAGAVGSMVGQIAKIQGCRVVGI
CCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEEE
AGGADKCRWLTETAGFDAAIDYKNEDVGKALDKHCPNGIDINFENVGGKIMDEVIARLND
CCCCHHHHEEHHCCCCCEEECCCCCHHHHHHHHHCCCCCEEEHHHCCHHHHHHHHHHHHH
FSRMPLCGLISTYNATDPVPGPYNFSNLLMRRTLVKGFIVIDYFPRFPEGMQQMAQWFME
CCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHC
GKLKYETDIVDGFEKAPASLSRLFEGKNLGKLVVQVSPEPV
CCCEEEHHHHHHHHHCHHHHHHHHCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]