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The map label for this gene is yidK [H]

Identifier: 114799711

GI number: 114799711

Start: 2264088

End: 2265698

Strand: Reverse

Name: yidK [H]

Synonym: HNE_2177

Alternate gene names: 114799711

Gene position: 2265698-2264088 (Counterclockwise)

Preceding gene: 114800451

Following gene: 114797369

Centisome position: 61.15

GC content: 53.45

Gene sequence:

>1611_bases
GTGTCCACCTTCCTGTTCTTCACCGCCCTTGTTGCGTTGATCTCGTATCTGGCAACACGCAGGCACAGAATGGACAGCTC
GGACGCCTATTTCCTCGGCGGGAGATCGCTGACAGCATGGATCATCGCGGGATCGTTGATGCTGACGAACCTTTCGACGG
AACACCTCATCGGACTTAACGGCGATGCATTCAATCACACCTTTGCCGTAACGGCATGGGAAACGACAGCGGCAATTGCT
ATGGTGGTGATGGCACTTTTTTTCCTGCCGCGATACCTGAAGAGCGGCTTTGCCACGATTCCTCAGTTCCTCGCTGAGAG
GTATGACGGGCAGACCCGGACCATAGCGACCCTGATTTTCCTCTTCTCGTATGTCGTCGCCATCTTGCCGGTTGTGCTCC
TTTTTGGTGCAACCGGAATCGACAGCCTCTTCGACATTTCTGAACAAACGGGTCTATCACCAGACTTGGTCAAATGGATG
TTGGTGTGGGGAATTGGCGCGCTTGGATCAATTTATGCCGTGTTCGGAGGATTGAGGGCCGTTGCCATCTCCGACACGGT
GAACGGTATCGGATTTCTGATCGCAGCGTTGCTTATTCCCGCGCTGGCGCTCTGGATGATCGGGGACGGCAACCCGATGG
CGGGGCTTGAAACCGTATACACTGCCGAAAAGCCAAAATTCGATGTAACAGGCGATGAGCCCGGCTCTTTCCTGCCCTTC
AGCGTTCTGTTCACAGGCATGATCGTAAACCAGATTTTCTTCTGGTGCACCAACCAGTCGATTGTTCAGCGGGCGCTGGG
CGCGAAAAATCTGAAGGAGGGACAGAAAGGGGTTCTAATCGCTGCGGGATTTAAGCTCCTCGGTCCGGCAGTAGTTGTCC
TTCCCGGCATCATCGCATTCTACTTATTCAAGGATGATCTCTCCAAGGATCAATATCTGCAGGCTTATCCCATGCTGGTA
AAGGCTGTGCTGCCTGATTGGCTTGTCGGGTTCTTTGCTGCTGTCATGGTTGGTGCTGTCCTGTCGACGTTTAACAGTGT
TCTCAATAGTTCGGCGACGCTGTTCAGCGAGGGCATCTATAAATCTATCTTCAACAAAGAGGCCTCCGGAGAGCGTATCG
TTCTGTCAGGGCGCGTATGCAGTGTTGTGCTGGCGTTGGCGGCGATGATTGCCGCGCCGCTAATCGACACGTCTGGCAGC
CTTCATAACTATCTGCAGAAGATAAATGCGACCTTTTTCGGGCCCATGTTGGCAGTCATCCTGCTGGGGTTCTTTACGCG
GCGGGTTCCCGCTCTTGCTGCCAAGGTGGTGCTGATCGGTGGCCCGGTCCTGTTCTTTCTGCTGGTGTTTGCTTTTGAGG
GGCCGGTCCAGGCATTCCTGCGTGACCTGTTCCGAACGCCGTATGATATTCACTTCCTTCACTTGTTGGCCCTCATTTTC
TCAGTGTCCGTAATATTCATGCTCGTGGTGGGTCTCGTTTCGCCAGCGCAGAAAATTTACAAGGCCGAATATACCCACGA
TGTCGACATAACTCCGTGGCGTCACGCAAAGGTAGTGGGTAGTGTAATCATTGTGCTGACGATAGGGTTTTATGCTCTGA
TGGCCCAGTAG

Upstream 100 bases:

>100_bases
TAAATTATGAAAAAAACGTTCTAACAATCGGGTTGCGGACAGATACGGCAACTTATGCCGCGAACGACAGCAAGGCCACG
ATAAATCCATGTTCCTGACA

Downstream 100 bases:

>100_bases
GCTGGACTGAAACTGTCGTCACAACCCCATTTCGGGCTATTCAAGAGGATTATCATGTTGCGAGACATTTCGCATTTCGT
GAATGGTGCACAGCTGCCGG

Product: putative symporter YidK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 535

Protein sequence:

>536_residues
MSTFLFFTALVALISYLATRRHRMDSSDAYFLGGRSLTAWIIAGSLMLTNLSTEHLIGLNGDAFNHTFAVTAWETTAAIA
MVVMALFFLPRYLKSGFATIPQFLAERYDGQTRTIATLIFLFSYVVAILPVVLLFGATGIDSLFDISEQTGLSPDLVKWM
LVWGIGALGSIYAVFGGLRAVAISDTVNGIGFLIAALLIPALALWMIGDGNPMAGLETVYTAEKPKFDVTGDEPGSFLPF
SVLFTGMIVNQIFFWCTNQSIVQRALGAKNLKEGQKGVLIAAGFKLLGPAVVVLPGIIAFYLFKDDLSKDQYLQAYPMLV
KAVLPDWLVGFFAAVMVGAVLSTFNSVLNSSATLFSEGIYKSIFNKEASGERIVLSGRVCSVVLALAAMIAAPLIDTSGS
LHNYLQKINATFFGPMLAVILLGFFTRRVPALAAKVVLIGGPVLFFLLVFAFEGPVQAFLRDLFRTPYDIHFLHLLALIF
SVSVIFMLVVGLVSPAQKIYKAEYTHDVDITPWRHAKVVGSVIIVLTIGFYALMAQ

Sequences:

>Translated_536_residues
MSTFLFFTALVALISYLATRRHRMDSSDAYFLGGRSLTAWIIAGSLMLTNLSTEHLIGLNGDAFNHTFAVTAWETTAAIA
MVVMALFFLPRYLKSGFATIPQFLAERYDGQTRTIATLIFLFSYVVAILPVVLLFGATGIDSLFDISEQTGLSPDLVKWM
LVWGIGALGSIYAVFGGLRAVAISDTVNGIGFLIAALLIPALALWMIGDGNPMAGLETVYTAEKPKFDVTGDEPGSFLPF
SVLFTGMIVNQIFFWCTNQSIVQRALGAKNLKEGQKGVLIAAGFKLLGPAVVVLPGIIAFYLFKDDLSKDQYLQAYPMLV
KAVLPDWLVGFFAAVMVGAVLSTFNSVLNSSATLFSEGIYKSIFNKEASGERIVLSGRVCSVVLALAAMIAAPLIDTSGS
LHNYLQKINATFFGPMLAVILLGFFTRRVPALAAKVVLIGGPVLFFLLVFAFEGPVQAFLRDLFRTPYDIHFLHLLALIF
SVSVIFMLVVGLVSPAQKIYKAEYTHDVDITPWRHAKVVGSVIIVLTIGFYALMAQ
>Mature_535_residues
STFLFFTALVALISYLATRRHRMDSSDAYFLGGRSLTAWIIAGSLMLTNLSTEHLIGLNGDAFNHTFAVTAWETTAAIAM
VVMALFFLPRYLKSGFATIPQFLAERYDGQTRTIATLIFLFSYVVAILPVVLLFGATGIDSLFDISEQTGLSPDLVKWML
VWGIGALGSIYAVFGGLRAVAISDTVNGIGFLIAALLIPALALWMIGDGNPMAGLETVYTAEKPKFDVTGDEPGSFLPFS
VLFTGMIVNQIFFWCTNQSIVQRALGAKNLKEGQKGVLIAAGFKLLGPAVVVLPGIIAFYLFKDDLSKDQYLQAYPMLVK
AVLPDWLVGFFAAVMVGAVLSTFNSVLNSSATLFSEGIYKSIFNKEASGERIVLSGRVCSVVLALAAMIAAPLIDTSGSL
HNYLQKINATFFGPMLAVILLGFFTRRVPALAAKVVLIGGPVLFFLLVFAFEGPVQAFLRDLFRTPYDIHFLHLLALIFS
VSVIFMLVVGLVSPAQKIYKAEYTHDVDITPWRHAKVVGSVIIVLTIGFYALMAQ

Specific function: Unknown

COG id: COG4146

COG function: function code R; Predicted symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Homo sapiens, GI17941285, Length=457, Percent_Identity=30.4157549234136, Blast_Score=176, Evalue=4e-44,
Organism=Homo sapiens, GI110835708, Length=535, Percent_Identity=28.5981308411215, Blast_Score=175, Evalue=9e-44,
Organism=Homo sapiens, GI14140236, Length=455, Percent_Identity=26.8131868131868, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI4507031, Length=454, Percent_Identity=28.8546255506608, Blast_Score=172, Evalue=9e-43,
Organism=Homo sapiens, GI206597483, Length=525, Percent_Identity=27.8095238095238, Blast_Score=158, Evalue=1e-38,
Organism=Homo sapiens, GI109659836, Length=596, Percent_Identity=28.1879194630872, Blast_Score=158, Evalue=2e-38,
Organism=Homo sapiens, GI4507033, Length=459, Percent_Identity=27.2331154684096, Blast_Score=151, Evalue=2e-36,
Organism=Homo sapiens, GI206597487, Length=542, Percent_Identity=26.7527675276753, Blast_Score=149, Evalue=6e-36,
Organism=Homo sapiens, GI109659839, Length=612, Percent_Identity=27.4509803921569, Blast_Score=148, Evalue=2e-35,
Organism=Homo sapiens, GI157671931, Length=438, Percent_Identity=22.8310502283105, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI4507035, Length=427, Percent_Identity=21.5456674473068, Blast_Score=76, Evalue=8e-14,
Organism=Homo sapiens, GI256985183, Length=450, Percent_Identity=22.6666666666667, Blast_Score=70, Evalue=5e-12,
Organism=Escherichia coli, GI1790113, Length=535, Percent_Identity=42.803738317757, Blast_Score=424, Evalue=1e-120,
Organism=Caenorhabditis elegans, GI115533094, Length=476, Percent_Identity=22.6890756302521, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28573698, Length=446, Percent_Identity=23.3183856502242, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24645928, Length=425, Percent_Identity=24.9411764705882, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24651739, Length=440, Percent_Identity=22.7272727272727, Blast_Score=69, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR018212
- InterPro:   IPR019900 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 58240; Mature: 58108

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFLFFTALVALISYLATRRHRMDSSDAYFLGGRSLTAWIIAGSLMLTNLSTEHLIGLN
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCCHHHEEECC
GDAFNHTFAVTAWETTAAIAMVVMALFFLPRYLKSGFATIPQFLAERYDGQTRTIATLIF
CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LFSYVVAILPVVLLFGATGIDSLFDISEQTGLSPDLVKWMLVWGIGALGSIYAVFGGLRA
HHHHHHHHHHHHHHHCCCCHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHH
VAISDTVNGIGFLIAALLIPALALWMIGDGNPMAGLETVYTAEKPKFDVTGDEPGSFLPF
EEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHH
SVLFTGMIVNQIFFWCTNQSIVQRALGAKNLKEGQKGVLIAAGFKLLGPAVVVLPGIIAF
HHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCCCCCEEEEECHHHHHHHHHHHHHHHHH
YLFKDDLSKDQYLQAYPMLVKAVLPDWLVGFFAAVMVGAVLSTFNSVLNSSATLFSEGIY
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KSIFNKEASGERIVLSGRVCSVVLALAAMIAAPLIDTSGSLHNYLQKINATFFGPMLAVI
HHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LLGFFTRRVPALAAKVVLIGGPVLFFLLVFAFEGPVQAFLRDLFRTPYDIHFLHLLALIF
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHH
SVSVIFMLVVGLVSPAQKIYKAEYTHDVDITPWRHAKVVGSVIIVLTIGFYALMAQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STFLFFTALVALISYLATRRHRMDSSDAYFLGGRSLTAWIIAGSLMLTNLSTEHLIGLN
CHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCCHHHEEECC
GDAFNHTFAVTAWETTAAIAMVVMALFFLPRYLKSGFATIPQFLAERYDGQTRTIATLIF
CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LFSYVVAILPVVLLFGATGIDSLFDISEQTGLSPDLVKWMLVWGIGALGSIYAVFGGLRA
HHHHHHHHHHHHHHHCCCCHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHH
VAISDTVNGIGFLIAALLIPALALWMIGDGNPMAGLETVYTAEKPKFDVTGDEPGSFLPF
EEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHH
SVLFTGMIVNQIFFWCTNQSIVQRALGAKNLKEGQKGVLIAAGFKLLGPAVVVLPGIIAF
HHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCCCCCEEEEECHHHHHHHHHHHHHHHHH
YLFKDDLSKDQYLQAYPMLVKAVLPDWLVGFFAAVMVGAVLSTFNSVLNSSATLFSEGIY
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KSIFNKEASGERIVLSGRVCSVVLALAAMIAAPLIDTSGSLHNYLQKINATFFGPMLAVI
HHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LLGFFTRRVPALAAKVVLIGGPVLFFLLVFAFEGPVQAFLRDLFRTPYDIHFLHLLALIF
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHH
SVSVIFMLVVGLVSPAQKIYKAEYTHDVDITPWRHAKVVGSVIIVLTIGFYALMAQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]