Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114799662

Identifier: 114799662

GI number: 114799662

Start: 3644945

End: 3646813

Strand: Direct

Name: 114799662

Synonym: HNE_3511

Alternate gene names: NA

Gene position: 3644945-3646813 (Clockwise)

Preceding gene: 114798656

Following gene: 114799832

Centisome position: 98.38

GC content: 65.76

Gene sequence:

>1869_bases
ATGACGCTGCTGGCGGGGATTGTCCTGCTGGCCGGGAACATTGCGGCGCAAAGACTGCTGGCGGGCGCGCGGCTCGATTT
CACCGAGGGCAAGCTCTACACGCTTTCTGATGCGACCCGCGTGACGCTGCGCGATCTGGCCGAGCCGGTGGAGATCACCT
ACGTTTACTCCCGGCGCGTGGGACAGGACTATCCGGCGATCCAGGCCCATGCGGCGCGCGTGCGGGAGCTGCTGGCGACC
TATGCAGCGGCTTCCGGCGGAAATGTCCGCGTGCGGGAGATTGATCCCAAGCCGTTTTCCGAAGCCGAGGACGAAGCCCT
TGCCGCTGGCATCAGCGCCATTCCCGCCTCGGGCAATGATCCGCTCTATTTCGGCATCATCGGGCGCAACGCAATTGACG
ATCTGCGCCTCATCCCGTTCCTGGCGCCCGAGCGGGAAACGACGCTGGAATATGACCTGACACGGATGATTGCGCGGCTG
GACAATCCCGAACCACCGCGTGTGGGCATCATCAGCTCCCTGCCCGGCATGAAGGCGCTGGACGGGGAAAGCGGCTATGT
CGTTTTGCAGGACATCGGGCGCAGCTTTAGCGTGGAGCAGATCCCGGATGATTTCGGGTCGTTGCCAGAAATGGATGTGC
TGCTTGTGGCCCATCCCGGCACGCTCACGGCGCGGCAGGAATGGCTGATCGACCAGTTCATTCTGCGGCAGGGGCGCGCG
ATCTTCGTGGTCGACCCCGCAGCGAAGACGGCGCTGTCCGGTGCGATGTTTTCGGCGACCGACTCGCTGGCGCGCTCCAG
CCTCGGGCGGCTCGGCGCGGTCTGGGGTGTGGAACTTGCGCCGCAGGCGGTGGCAGACGCGGCCAACGCGCTTACCGTAC
CGGTGGAGTCGTTTACCGGGCGCGTGGATGAGGTTGCCCACCCGCTGTTTGTCGGCGTGCCCGCCGAAACGATGAGCCGG
AACGATCCGATCACGGCAGACCTGATGCGCGTGGTGAATTTTGGCGCGCCGGGGGCGTTGATCCAGGGAAGCCTTCCTGA
GGGCGTAATATTGGCGCCGCTGATCACGACCGGGCCGAGCCCCTCCTTCATCGATCCGGCACGCGCCGCGCGCGACATGG
CGGCAGATGAGGTCTTACAAAGCTACATGACCGAAGCGGCGCCGCTGGTGATGGCGGCGCGCCTGTCGGGCCGCTTGCCG
AGCGCCTTTCCCAATGGGGCGCCTGCGATGGACGAACCCTCCGACGCAAGCGACCTTGAGGCTGCAAAGGCCGAGGCCGC
GAGCCTGCCCCCGCATATTGCCGCCAGCGAGACACCGGCCGAAGTGGTGATGATTGCTGACGCGGACTTTCTGGCGGATG
ATTTCTATGTGGTGCCGGGCTCGGGCATGGTGGTGGCGGACAATGGCGCGCTGCTGCTGAATGCCATCGACGCGCTGGCG
GGCCGGGGCGAGCTGTCGCGGCTTCGCTCCCGCGCGGCAAGCCTGCGGCCGATGGTGCGTATCGAGACGATGCGTGACGC
GGCAGAGACGCAATACTTCCGCCAGCAATCGGAGCTGGAAGCGCGCCTCTCCACGGCGCAGGCACGCTTGAGCGAGCTGC
AGTCGAGCGCTTCAGGCGACGGTTTCTTCGCAGGCGATCCCGAAGCCGAGCTCACGGCCGATGAACGGGCGGAGCTGTCT
ACCCTGCGCGAAGACATTCTGACCATTCGCGCGAGCCTGCGCGATATTGAACGCGACTATCGCCGGGACATCGATGCGCT
GGAGGCCACCCTCAAGGCGATCAATATCTGGGGCGGGCCTTTGCTGGTGACGCTGGCGGGCATTCTGGTCTGGCGCCGTC
AGGCCAAAAAGCGGCGGGGCGCCGCATGA

Upstream 100 bases:

>100_bases
CTTTCTGGGCTTTACGGCGACCTTCGCGTTTCTCAACTGCCTCTGGGCATCGCGCCGGAGGCTTGGCTGAAAGATGAAGG
CGCGCCGCTATCTGGTTTTG

Downstream 100 bases:

>100_bases
CCGCGCTGAGAAACCAGCACAGGGCCTTCCGGGTCAAGGTGATGGGCGCGGTTGCCGGCGCGCTCGTGCTCGCCGCCATT
GGCAGCCAGTTTCTGGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 622; Mature: 621

Protein sequence:

>622_residues
MTLLAGIVLLAGNIAAQRLLAGARLDFTEGKLYTLSDATRVTLRDLAEPVEITYVYSRRVGQDYPAIQAHAARVRELLAT
YAAASGGNVRVREIDPKPFSEAEDEALAAGISAIPASGNDPLYFGIIGRNAIDDLRLIPFLAPERETTLEYDLTRMIARL
DNPEPPRVGIISSLPGMKALDGESGYVVLQDIGRSFSVEQIPDDFGSLPEMDVLLVAHPGTLTARQEWLIDQFILRQGRA
IFVVDPAAKTALSGAMFSATDSLARSSLGRLGAVWGVELAPQAVADAANALTVPVESFTGRVDEVAHPLFVGVPAETMSR
NDPITADLMRVVNFGAPGALIQGSLPEGVILAPLITTGPSPSFIDPARAARDMAADEVLQSYMTEAAPLVMAARLSGRLP
SAFPNGAPAMDEPSDASDLEAAKAEAASLPPHIAASETPAEVVMIADADFLADDFYVVPGSGMVVADNGALLLNAIDALA
GRGELSRLRSRAASLRPMVRIETMRDAAETQYFRQQSELEARLSTAQARLSELQSSASGDGFFAGDPEAELTADERAELS
TLREDILTIRASLRDIERDYRRDIDALEATLKAINIWGGPLLVTLAGILVWRRQAKKRRGAA

Sequences:

>Translated_622_residues
MTLLAGIVLLAGNIAAQRLLAGARLDFTEGKLYTLSDATRVTLRDLAEPVEITYVYSRRVGQDYPAIQAHAARVRELLAT
YAAASGGNVRVREIDPKPFSEAEDEALAAGISAIPASGNDPLYFGIIGRNAIDDLRLIPFLAPERETTLEYDLTRMIARL
DNPEPPRVGIISSLPGMKALDGESGYVVLQDIGRSFSVEQIPDDFGSLPEMDVLLVAHPGTLTARQEWLIDQFILRQGRA
IFVVDPAAKTALSGAMFSATDSLARSSLGRLGAVWGVELAPQAVADAANALTVPVESFTGRVDEVAHPLFVGVPAETMSR
NDPITADLMRVVNFGAPGALIQGSLPEGVILAPLITTGPSPSFIDPARAARDMAADEVLQSYMTEAAPLVMAARLSGRLP
SAFPNGAPAMDEPSDASDLEAAKAEAASLPPHIAASETPAEVVMIADADFLADDFYVVPGSGMVVADNGALLLNAIDALA
GRGELSRLRSRAASLRPMVRIETMRDAAETQYFRQQSELEARLSTAQARLSELQSSASGDGFFAGDPEAELTADERAELS
TLREDILTIRASLRDIERDYRRDIDALEATLKAINIWGGPLLVTLAGILVWRRQAKKRRGAA
>Mature_621_residues
TLLAGIVLLAGNIAAQRLLAGARLDFTEGKLYTLSDATRVTLRDLAEPVEITYVYSRRVGQDYPAIQAHAARVRELLATY
AAASGGNVRVREIDPKPFSEAEDEALAAGISAIPASGNDPLYFGIIGRNAIDDLRLIPFLAPERETTLEYDLTRMIARLD
NPEPPRVGIISSLPGMKALDGESGYVVLQDIGRSFSVEQIPDDFGSLPEMDVLLVAHPGTLTARQEWLIDQFILRQGRAI
FVVDPAAKTALSGAMFSATDSLARSSLGRLGAVWGVELAPQAVADAANALTVPVESFTGRVDEVAHPLFVGVPAETMSRN
DPITADLMRVVNFGAPGALIQGSLPEGVILAPLITTGPSPSFIDPARAARDMAADEVLQSYMTEAAPLVMAARLSGRLPS
AFPNGAPAMDEPSDASDLEAAKAEAASLPPHIAASETPAEVVMIADADFLADDFYVVPGSGMVVADNGALLLNAIDALAG
RGELSRLRSRAASLRPMVRIETMRDAAETQYFRQQSELEARLSTAQARLSELQSSASGDGFFAGDPEAELTADERAELST
LREDILTIRASLRDIERDYRRDIDALEATLKAINIWGGPLLVTLAGILVWRRQAKKRRGAA

Specific function: Unknown

COG id: COG3225

COG function: function code N; ABC-type uncharacterized transport system involved in gliding motility, auxiliary component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66431; Mature: 66300

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLAGIVLLAGNIAAQRLLAGARLDFTEGKLYTLSDATRVTLRDLAEPVEITYVYSRRV
CHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEECCCHHHHHHHCCCCEEEEEEEHHHC
GQDYPAIQAHAARVRELLATYAAASGGNVRVREIDPKPFSEAEDEALAAGISAIPASGND
CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHCHHHCCCCCCC
PLYFGIIGRNAIDDLRLIPFLAPERETTLEYDLTRMIARLDNPEPPRVGIISSLPGMKAL
CEEEEEECCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEHECCCCCCCCC
DGESGYVVLQDIGRSFSVEQIPDDFGSLPEMDVLLVAHPGTLTARQEWLIDQFILRQGRA
CCCCCEEEEECCCCCCCHHHCCHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCE
IFVVDPAAKTALSGAMFSATDSLARSSLGRLGAVWGVELAPQAVADAANALTVPVESFTG
EEEECCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEHHHHCC
RVDEVAHPLFVGVPAETMSRNDPITADLMRVVNFGAPGALIQGSLPEGVILAPLITTGPS
CHHHHCCCEEEECCHHHHCCCCCHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEEECCCC
PSFIDPARAARDMAADEVLQSYMTEAAPLVMAARLSGRLPSAFPNGAPAMDEPSDASDLE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
AAKAEAASLPPHIAASETPAEVVMIADADFLADDFYVVPGSGMVVADNGALLLNAIDALA
HHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCEEEECCCEEEHHHHHHHH
GRGELSRLRSRAASLRPMVRIETMRDAAETQYFRQQSELEARLSTAQARLSELQSSASGD
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GFFAGDPEAELTADERAELSTLREDILTIRASLRDIERDYRRDIDALEATLKAINIWGGP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LLVTLAGILVWRRQAKKRRGAA
HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TLLAGIVLLAGNIAAQRLLAGARLDFTEGKLYTLSDATRVTLRDLAEPVEITYVYSRRV
HHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEECCCHHHHHHHCCCCEEEEEEEHHHC
GQDYPAIQAHAARVRELLATYAAASGGNVRVREIDPKPFSEAEDEALAAGISAIPASGND
CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHCHHHCCCCCCC
PLYFGIIGRNAIDDLRLIPFLAPERETTLEYDLTRMIARLDNPEPPRVGIISSLPGMKAL
CEEEEEECCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEHECCCCCCCCC
DGESGYVVLQDIGRSFSVEQIPDDFGSLPEMDVLLVAHPGTLTARQEWLIDQFILRQGRA
CCCCCEEEEECCCCCCCHHHCCHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCE
IFVVDPAAKTALSGAMFSATDSLARSSLGRLGAVWGVELAPQAVADAANALTVPVESFTG
EEEECCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEHHHHCC
RVDEVAHPLFVGVPAETMSRNDPITADLMRVVNFGAPGALIQGSLPEGVILAPLITTGPS
CHHHHCCCEEEECCHHHHCCCCCHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEEECCCC
PSFIDPARAARDMAADEVLQSYMTEAAPLVMAARLSGRLPSAFPNGAPAMDEPSDASDLE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
AAKAEAASLPPHIAASETPAEVVMIADADFLADDFYVVPGSGMVVADNGALLLNAIDALA
HHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCEEEECCCEEEHHHHHHHH
GRGELSRLRSRAASLRPMVRIETMRDAAETQYFRQQSELEARLSTAQARLSELQSSASGD
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GFFAGDPEAELTADERAELSTLREDILTIRASLRDIERDYRRDIDALEATLKAINIWGGP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LLVTLAGILVWRRQAKKRRGAA
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA