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The map label for this gene is ytcJ [H]

Identifier: 114799630

GI number: 114799630

Start: 3632878

End: 3634533

Strand: Reverse

Name: ytcJ [H]

Synonym: HNE_3497

Alternate gene names: 114799630

Gene position: 3634533-3632878 (Counterclockwise)

Preceding gene: 114799496

Following gene: 114798714

Centisome position: 98.1

GC content: 62.62

Gene sequence:

>1656_bases
ATGCGCTTCATCGCCCTCGCCGCGCTCGCCGCCATAGCCCTCGCGGCCTGCGTAGAGCCGTCGCCCGCCACACCCGGCGC
AGACGGCAAGATCCGCATCTTCACCGGCGGCACGATCTATACCGGCCTGGAAGACCCTGCCACGGTCGACGCCATCGTCG
TCGGCCCCGACGGCCGCATCCTGGGCACCACCCCGCCGCTCTCCAAAGACTGGAGCGAGGAAGAGGTTGAAACGATTGAT
CTTTCCGGCGCCGTCATGTTCCCCGGCTTCACCGATGCCCACGCCCACCTTCAGGGCATTGGCGAGCGCGAATTGCGATT
CACGCTGGAGGGCACGGCCTCCATCGACGAACTCGTCACCCGCGTCGAAGCGGAGCTGCAGGGGAAACCGCCCGGGGAGA
TTCTGTTGGGGCGCGGCTGGATCGAAACCGGCTGGCCGGAAGGGCGCATGCCATCGGCGGCAGACCTTGACGCGGTCAGC
CCGGATAACCCGGTAATCCTCGTCCGCTCGGACGGCCACGCCCTTGTTGCCAACACCCTGGCGCTGAAAGCCGCCAATAT
CTACGATATTGGCGCGGATTCCCCCGGTGGCTTCACCGAGCGTGACGAGAATTTCAAAGCCACAGGCATCGTCATCGACG
AGTCGATGTACCCTGTGATGGCCCTCGTCGAGCAGCCAACTTATGACCAGATGCAGCAGGCGCTGGAAATCGGCGCCAAG
ACCTATGCGTCGCGCGGCTGGACAGGCGTGCACAATATGAGCGCTGACCGCGAGCATGGCCGGCTACTGAAAGAACTGGA
CGATAGCGGCCGCCTTCCCTTGCGCGTCTACAACGCCTTTGAACCCAACGGCTCCGAAATCACCGAAGGCCGCCAATATG
AGACCGCCAGGATCACCAACCGGGCGGTGAAGCTCTATATCGACGGCGCGCTCGGCAGCCGGGGCGCCCTGCTGATCGAG
CCCTATTCAGACCGGCCCGAAACCAGCGGCCTGGAAATTCTAGACATTTACGGCCTGCACAATGAGATGATGGATGCCCA
GGAAAACGACGTTCAGCTGTCCATCCATGCCATCGGTGATCTCGCCAACCGCAACATTCTCGATAAATTCGAGGAGCTGG
GCTACGGCGCCGATCTGCGCTGGCGCATCGAACACGCCCAGATGCTGCACCCGGATGACATCGACCGGCTGGCAACCAGT
GGCCTCATCCCTTCGATGCAGCCAAGCCATGCCATCGGCGACCTGCATTTTGCCCCCGCCCGCGTGGGCATCGACCGGCT
GCGCGGGGCCTATGCCTGGGCAAGCCTCCTGAAAGCGGGCGCTGTTATCGCGGGCGGCTCAGACGCGCCGGTTGAAGTCG
GCTCCCCGACCATCGAGTTCTATGCCGCTGTCGCGCGCAAGGATTTGAAGGGTTTCTCCGGCGAAGGCTGGCACCCTGAA
GAGGCTGTCACCCGCCAGCAGGCGCTGAAGCTGTTCACTACAGGCCCTGCCTTTGCCAGCTTCCAGGAAAATGATCTCGG
CACCATCGAAACCGGGAAAATCGCCGATTTCACCGTATTTGACCGCGATCTCATGACAATTCCGGAAGCCGAGATTCTCG
AAGCCAAACCCGTGATGACGGTTGTGGCTGGCGAAATTGTGTTTGACGGGCGCTAG

Upstream 100 bases:

>100_bases
AATTGACACGTGGTGGCACGGTTCTGCCCCGTTCAGGGGGCTGGCGCCACGTCCGGAACCGGTTCATGAATTTCAGGCAA
TCTCAGGGAAGGGGACCTCC

Downstream 100 bases:

>100_bases
GGAGGGGCCGGCGCCTCTCTCTATTGTGAAAGGCGCCGGGCTGGACGTGGCCCCGGCGCCCCATACCTTTGACCTCGTAA
CCGCGCGGTACTTCCGGCGG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 551; Mature: 551

Protein sequence:

>551_residues
MRFIALAALAAIALAACVEPSPATPGADGKIRIFTGGTIYTGLEDPATVDAIVVGPDGRILGTTPPLSKDWSEEEVETID
LSGAVMFPGFTDAHAHLQGIGERELRFTLEGTASIDELVTRVEAELQGKPPGEILLGRGWIETGWPEGRMPSAADLDAVS
PDNPVILVRSDGHALVANTLALKAANIYDIGADSPGGFTERDENFKATGIVIDESMYPVMALVEQPTYDQMQQALEIGAK
TYASRGWTGVHNMSADREHGRLLKELDDSGRLPLRVYNAFEPNGSEITEGRQYETARITNRAVKLYIDGALGSRGALLIE
PYSDRPETSGLEILDIYGLHNEMMDAQENDVQLSIHAIGDLANRNILDKFEELGYGADLRWRIEHAQMLHPDDIDRLATS
GLIPSMQPSHAIGDLHFAPARVGIDRLRGAYAWASLLKAGAVIAGGSDAPVEVGSPTIEFYAAVARKDLKGFSGEGWHPE
EAVTRQQALKLFTTGPAFASFQENDLGTIETGKIADFTVFDRDLMTIPEAEILEAKPVMTVVAGEIVFDGR

Sequences:

>Translated_551_residues
MRFIALAALAAIALAACVEPSPATPGADGKIRIFTGGTIYTGLEDPATVDAIVVGPDGRILGTTPPLSKDWSEEEVETID
LSGAVMFPGFTDAHAHLQGIGERELRFTLEGTASIDELVTRVEAELQGKPPGEILLGRGWIETGWPEGRMPSAADLDAVS
PDNPVILVRSDGHALVANTLALKAANIYDIGADSPGGFTERDENFKATGIVIDESMYPVMALVEQPTYDQMQQALEIGAK
TYASRGWTGVHNMSADREHGRLLKELDDSGRLPLRVYNAFEPNGSEITEGRQYETARITNRAVKLYIDGALGSRGALLIE
PYSDRPETSGLEILDIYGLHNEMMDAQENDVQLSIHAIGDLANRNILDKFEELGYGADLRWRIEHAQMLHPDDIDRLATS
GLIPSMQPSHAIGDLHFAPARVGIDRLRGAYAWASLLKAGAVIAGGSDAPVEVGSPTIEFYAAVARKDLKGFSGEGWHPE
EAVTRQQALKLFTTGPAFASFQENDLGTIETGKIADFTVFDRDLMTIPEAEILEAKPVMTVVAGEIVFDGR
>Mature_551_residues
MRFIALAALAAIALAACVEPSPATPGADGKIRIFTGGTIYTGLEDPATVDAIVVGPDGRILGTTPPLSKDWSEEEVETID
LSGAVMFPGFTDAHAHLQGIGERELRFTLEGTASIDELVTRVEAELQGKPPGEILLGRGWIETGWPEGRMPSAADLDAVS
PDNPVILVRSDGHALVANTLALKAANIYDIGADSPGGFTERDENFKATGIVIDESMYPVMALVEQPTYDQMQQALEIGAK
TYASRGWTGVHNMSADREHGRLLKELDDSGRLPLRVYNAFEPNGSEITEGRQYETARITNRAVKLYIDGALGSRGALLIE
PYSDRPETSGLEILDIYGLHNEMMDAQENDVQLSIHAIGDLANRNILDKFEELGYGADLRWRIEHAQMLHPDDIDRLATS
GLIPSMQPSHAIGDLHFAPARVGIDRLRGAYAWASLLKAGAVIAGGSDAPVEVGSPTIEFYAAVARKDLKGFSGEGWHPE
EAVTRQQALKLFTTGPAFASFQENDLGTIETGKIADFTVFDRDLMTIPEAEILEAKPVMTVVAGEIVFDGR

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 59459; Mature: 59459

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFIALAALAAIALAACVEPSPATPGADGKIRIFTGGTIYTGLEDPATVDAIVVGPDGRI
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCEEEECCCCCCCEEEEEECCCCEE
LGTTPPLSKDWSEEEVETIDLSGAVMFPGFTDAHAHLQGIGERELRFTLEGTASIDELVT
EECCCCCCCCCCCCCCEEEECCCEEECCCCCCHHHHHHCCCCCEEEEEEECCCCHHHHHH
RVEAELQGKPPGEILLGRGWIETGWPEGRMPSAADLDAVSPDNPVILVRSDGHALVANTL
HHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEHE
ALKAANIYDIGADSPGGFTERDENFKATGIVIDESMYPVMALVEQPTYDQMQQALEIGAK
EEEECCEEECCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHH
TYASRGWTGVHNMSADREHGRLLKELDDSGRLPLRVYNAFEPNGSEITEGRQYETARITN
HHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCEEHHEECC
RAVKLYIDGALGSRGALLIEPYSDRPETSGLEILDIYGLHNEMMDAQENDVQLSIHAIGD
EEEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHCCCCCCEEEEEEEECC
LANRNILDKFEELGYGADLRWRIEHAQMLHPDDIDRLATSGLIPSMQPSHAIGDLHFAPA
HHCCHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEECHH
RVGIDRLRGAYAWASLLKAGAVIAGGSDAPVEVGSPTIEFYAAVARKDLKGFSGEGWHPE
HHCHHHHHHHHHHHHHHHCCEEEECCCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCH
EAVTRQQALKLFTTGPAFASFQENDLGTIETGKIADFTVFDRDLMTIPEAEILEAKPVMT
HHHHHHHHHEEEECCCCCCCCCCCCCCCEECCCEEEEEEECCCHHCCCCHHHHCCCCEEE
VVAGEIVFDGR
EEEEEEEECCC
>Mature Secondary Structure
MRFIALAALAAIALAACVEPSPATPGADGKIRIFTGGTIYTGLEDPATVDAIVVGPDGRI
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCEEEECCCCCCCEEEEEECCCCEE
LGTTPPLSKDWSEEEVETIDLSGAVMFPGFTDAHAHLQGIGERELRFTLEGTASIDELVT
EECCCCCCCCCCCCCCEEEECCCEEECCCCCCHHHHHHCCCCCEEEEEEECCCCHHHHHH
RVEAELQGKPPGEILLGRGWIETGWPEGRMPSAADLDAVSPDNPVILVRSDGHALVANTL
HHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEHE
ALKAANIYDIGADSPGGFTERDENFKATGIVIDESMYPVMALVEQPTYDQMQQALEIGAK
EEEECCEEECCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHH
TYASRGWTGVHNMSADREHGRLLKELDDSGRLPLRVYNAFEPNGSEITEGRQYETARITN
HHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCEEHHEECC
RAVKLYIDGALGSRGALLIEPYSDRPETSGLEILDIYGLHNEMMDAQENDVQLSIHAIGD
EEEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHCCCCCCEEEEEEEECC
LANRNILDKFEELGYGADLRWRIEHAQMLHPDDIDRLATSGLIPSMQPSHAIGDLHFAPA
HHCCHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEECHH
RVGIDRLRGAYAWASLLKAGAVIAGGSDAPVEVGSPTIEFYAAVARKDLKGFSGEGWHPE
HHCHHHHHHHHHHHHHHHCCEEEECCCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCH
EAVTRQQALKLFTTGPAFASFQENDLGTIETGKIADFTVFDRDLMTIPEAEILEAKPVMT
HHHHHHHHHEEEECCCCCCCCCCCCCCCEECCCEEEEEEECCCHHCCCCHHHHCCCCEEE
VVAGEIVFDGR
EEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]