| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799607
Identifier: 114799607
GI number: 114799607
Start: 357286
End: 358482
Strand: Reverse
Name: 114799607
Synonym: HNE_0367
Alternate gene names: NA
Gene position: 358482-357286 (Counterclockwise)
Preceding gene: 114799937
Following gene: 114799547
Centisome position: 9.68
GC content: 67.92
Gene sequence:
>1197_bases ATGCCGCGACACTTCAGACTTGTGGGCTTTCTGGCCCTGCTGGCTATGTGTGGGTTTGCGCCCGGAATGTGGGCGCAGGG CCCTGGCGTGGGCATTGGCACCGGCGAAGACCTGGCGGGCGCCTGCGCCGACGATGATGGCGCAGCCTGTTTAGCGCTGG GCGCGCAGCAATATGGGGCCGAGGGCGAGGCCGGCGCGCTGGCGCTGTTCAGCCAGGCCTGTGACCTGGGCGAGGCGGCG GCCTGTCTGCGCCTTGGCGGGGAGCTGGAATTTCCTGATTTCGGAGAGACCGACAGCGAGGGCGCGCTGGCGGCCTATAC CAGGGCCTGCGCGCTGGGCGCGGCGCAGGGCTGTGACCGCGCGGGCATCGCGGCAGGTGATCTGCCTGCGGAGGATGCCG GCGCGCCCCTGCCCCCGCCTGCCGAAGGGCAAGCTGCGGCGGCAGACGAAGCCGTCATCGTGGGCGTGATTGCGCCGCCT GCGGAAGACCCTTTTACCGGCTTTGCCAGCGAGGCGCTGCCCGATCTCGATTTCGGGACGCCGGTGAGCGATGTGACGCC GGAGGCTGAGATGGCGGCAGCGGAAGGCGAAGACGCGCTGTTTTCAACTGAGACGGCAGAGCCGGCAGCGGCGCCTTCGG AAGAAGACCTTCTGCTGGCGGAGGAGCGCCGGGCCATGGGCGAGGCGTGCGGCCGGGGCGAGATGGAGGCGTGCGAGATG TTTGCTGCCTGGTTGCGCGATGGCACCGGGGGCGCCGAAGACCGGGTGCGCGCGCGGCGGATATTCTCTGTGATCTGTAC GGAAGGATCGGTGAAGGGCTGCTATGAGCTGGGCTGGATGATGTATGACGCCGGGATCGGCAGCGGGAGCGGGCTGGATA CCGACGCGCTGGAAATGTCGCGGGCGCGGTTCCTGTTTTCCGAAACGTGCATGGCGGGCATTGTCGAAGCCTGCCTTCAG GGGGCGGACATGCGGCGCAATGGCGTGGGCGGGCGGGTGGATGTTGACGGCGCCGGGCGGCTTTATGCGATTGCGTGCGA GGCGGGGCTGGACGCGGGATGCCTGATGGCCGCGCCGGAGGATGCGCTGGCGGTGGAGGCTGAAGCGGTTGAGGCGGAGG CGTCTGAGGGCGCGAGTTTGGCGGAAGAGACTATCTCTGAAGAGATTACTTCTGAAGATTCTGCGCCGGAAGAATAA
Upstream 100 bases:
>100_bases CCCTTTGTCCGGCCCGCGCCAGGGCACGCGCCGGGGCACCAAGAGTTGACCCCGCAGGCGAGCCCGACAATATGGCGCCG GGCCGATAAGCGGGGAGCCT
Downstream 100 bases:
>100_bases AGCCGGCCCAAAAAAATCCCGGAGCACCGCGGGGGTGGCGTCCGGGAAGTCAGCGGGATGGACCGCGGGATTATTCGCTT GTGGGGGTCTGGTCTTTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MPRHFRLVGFLALLAMCGFAPGMWAQGPGVGIGTGEDLAGACADDDGAACLALGAQQYGAEGEAGALALFSQACDLGEAA ACLRLGGELEFPDFGETDSEGALAAYTRACALGAAQGCDRAGIAAGDLPAEDAGAPLPPPAEGQAAAADEAVIVGVIAPP AEDPFTGFASEALPDLDFGTPVSDVTPEAEMAAAEGEDALFSTETAEPAAAPSEEDLLLAEERRAMGEACGRGEMEACEM FAAWLRDGTGGAEDRVRARRIFSVICTEGSVKGCYELGWMMYDAGIGSGSGLDTDALEMSRARFLFSETCMAGIVEACLQ GADMRRNGVGGRVDVDGAGRLYAIACEAGLDAGCLMAAPEDALAVEAEAVEAEASEGASLAEETISEEITSEDSAPEE
Sequences:
>Translated_398_residues MPRHFRLVGFLALLAMCGFAPGMWAQGPGVGIGTGEDLAGACADDDGAACLALGAQQYGAEGEAGALALFSQACDLGEAA ACLRLGGELEFPDFGETDSEGALAAYTRACALGAAQGCDRAGIAAGDLPAEDAGAPLPPPAEGQAAAADEAVIVGVIAPP AEDPFTGFASEALPDLDFGTPVSDVTPEAEMAAAEGEDALFSTETAEPAAAPSEEDLLLAEERRAMGEACGRGEMEACEM FAAWLRDGTGGAEDRVRARRIFSVICTEGSVKGCYELGWMMYDAGIGSGSGLDTDALEMSRARFLFSETCMAGIVEACLQ GADMRRNGVGGRVDVDGAGRLYAIACEAGLDAGCLMAAPEDALAVEAEAVEAEASEGASLAEETISEEITSEDSAPEE >Mature_397_residues PRHFRLVGFLALLAMCGFAPGMWAQGPGVGIGTGEDLAGACADDDGAACLALGAQQYGAEGEAGALALFSQACDLGEAAA CLRLGGELEFPDFGETDSEGALAAYTRACALGAAQGCDRAGIAAGDLPAEDAGAPLPPPAEGQAAAADEAVIVGVIAPPA EDPFTGFASEALPDLDFGTPVSDVTPEAEMAAAEGEDALFSTETAEPAAAPSEEDLLLAEERRAMGEACGRGEMEACEMF AAWLRDGTGGAEDRVRARRIFSVICTEGSVKGCYELGWMMYDAGIGSGSGLDTDALEMSRARFLFSETCMAGIVEACLQG ADMRRNGVGGRVDVDGAGRLYAIACEAGLDAGCLMAAPEDALAVEAEAVEAEASEGASLAEETISEEITSEDSAPEE
Specific function: Unknown
COG id: COG0790
COG function: function code R; FOG: TPR repeat, SEL1 subfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40384; Mature: 40253
Theoretical pI: Translated: 3.62; Mature: 3.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRHFRLVGFLALLAMCGFAPGMWAQGPGVGIGTGEDLAGACADDDGAACLALGAQQYGA CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHCC EGEAGALALFSQACDLGEAAACLRLGGELEFPDFGETDSEGALAAYTRACALGAAQGCDR CCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC AGIAAGDLPAEDAGAPLPPPAEGQAAAADEAVIVGVIAPPAEDPFTGFASEALPDLDFGT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHCCCCCCCC PVSDVTPEAEMAAAEGEDALFSTETAEPAAAPSEEDLLLAEERRAMGEACGRGEMEACEM CCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH FAAWLRDGTGGAEDRVRARRIFSVICTEGSVKGCYELGWMMYDAGIGSGSGLDTDALEMS HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCEEHEECCCCCCCCCCHHHHHHH RARFLFSETCMAGIVEACLQGADMRRNGVGGRVDVDGAGRLYAIACEAGLDAGCLMAAPE HHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEECCCCCEEEEEECCCCCCCEEEECCC DALAVEAEAVEAEASEGASLAEETISEEITSEDSAPEE HHHEEHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PRHFRLVGFLALLAMCGFAPGMWAQGPGVGIGTGEDLAGACADDDGAACLALGAQQYGA CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHCC EGEAGALALFSQACDLGEAAACLRLGGELEFPDFGETDSEGALAAYTRACALGAAQGCDR CCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC AGIAAGDLPAEDAGAPLPPPAEGQAAAADEAVIVGVIAPPAEDPFTGFASEALPDLDFGT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHCCCCCCCC PVSDVTPEAEMAAAEGEDALFSTETAEPAAAPSEEDLLLAEERRAMGEACGRGEMEACEM CCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH FAAWLRDGTGGAEDRVRARRIFSVICTEGSVKGCYELGWMMYDAGIGSGSGLDTDALEMS HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCEEHEECCCCCCCCCCHHHHHHH RARFLFSETCMAGIVEACLQGADMRRNGVGGRVDVDGAGRLYAIACEAGLDAGCLMAAPE HHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEECCCCCEEEEEECCCCCCCEEEECCC DALAVEAEAVEAEASEGASLAEETISEEITSEDSAPEE HHHEEHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA