| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799561
Identifier: 114799561
GI number: 114799561
Start: 2892767
End: 2893891
Strand: Direct
Name: 114799561
Synonym: HNE_2729
Alternate gene names: NA
Gene position: 2892767-2893891 (Clockwise)
Preceding gene: 114798461
Following gene: 114800484
Centisome position: 78.08
GC content: 66.4
Gene sequence:
>1125_bases ATGAAAATCTGGACCGCACTGGCGCTTGGCGCCGCGCTTGCGCCGCTTCTGGGGGCCTGCGCCACGCCGCGCGCCACCTC GCCGATCACGCAGGATACGCTGACCTATTCCAACGAGGTCGCCACCGCCCAGCAGCGCCAGTTGCTGCTGAATATCGTGA AACTGCGCTACAACGACCCCGTCAGCTTCGTGGAAATCCAGACCCTGACCACCGAGGATTTCTCCGGCCGGGGCGGCAGC CTCACCAGCGCCATCGGCCTGGATGACGGCCCCTTCACCGAAGTGCTCGCCGGGGACGCCGGCTTCCAGCGCTCGGAAAC CCCCACAGCCGTCTACAACGTGCTGCGGGGCGGGGCCTATGCCCAGCAATTGCTGCAGCCGGTGGCCCCGGAATCGATCT TCCTGCTCAGCCAGTCAGGCTGGAGCGTGGAGCGGCTGATGCTGTGCTGCGTCGCGCGTATCGGAGACGTGGACAATGCC CGCGCCGCCGCGGGGCCAACGCCGGAAACCGTGCCGGATAACTCTGCGTTCCGCGGCCTCGCCCGCCTGATGCGGCGCCT GCAATTGTCCGGCGATCTGCTGGTGCAGGTGATGAATGATGACGAGGACAAGGCCGCCCGTGTCGTCATCACCTGGCATA CCGGATCAGACGATGGCGAAGCGCTGGCCCGCCTGTTCAAAGAACACGATGCGGCCGCCGAGTTCACGGTGGAAGACGGC CTCTATTCGGCAGAGCTTGCCACCCGGTCCACCCGCAAGGGCGACTCGCCCCTGCGCGGGCGCAGCGTGCTCGGCATGAT GGCCGCCCTCTCCCACGCGGTGGACATTCCGCCGGAACACGAGGATTTCGTCATCCCTATCAACGGGCCCGATGCGGCGC CCACGCCCTGCGCGCCGGTCGGCGTGTGGACGCATGTTCTGGGCGACTATTTCGGCGTTTCCTGGAGCGTCGAAAAACCC CTGACGGCGGCGGTGTCCGTGCCCTATCGCGGTGTGTGGTTCTCCATCGACGACACCTGCAAATCTGCCAAATCCACGCT GGATCTGATCGGCCATCTCTACGCCTTGCAGGCGGGCCTCAGCGCGGAAGGCAGCCGGGAGACCCTGCTGCTGATCGGCG GGTGA
Upstream 100 bases:
>100_bases TGTCCGGTTTTGTCCGGTTTTGTCCGAGTTTGTCTGGGCCCTGACCCGGTTTGCCCCGTTTCTGCGCCTCTTAATGTGTG GAAGTTTGGGGACGTGACAC
Downstream 100 bases:
>100_bases GGCCTTGATAATGGAGCGCCCGTAGTTGAGAGGAGAGGATCAGAGTTTCCGCTTCAGAAAGGCGTTGCCATGCCCCAGTT CGACATGATCCTCCTCACCC
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MKIWTALALGAALAPLLGACATPRATSPITQDTLTYSNEVATAQQRQLLLNIVKLRYNDPVSFVEIQTLTTEDFSGRGGS LTSAIGLDDGPFTEVLAGDAGFQRSETPTAVYNVLRGGAYAQQLLQPVAPESIFLLSQSGWSVERLMLCCVARIGDVDNA RAAAGPTPETVPDNSAFRGLARLMRRLQLSGDLLVQVMNDDEDKAARVVITWHTGSDDGEALARLFKEHDAAAEFTVEDG LYSAELATRSTRKGDSPLRGRSVLGMMAALSHAVDIPPEHEDFVIPINGPDAAPTPCAPVGVWTHVLGDYFGVSWSVEKP LTAAVSVPYRGVWFSIDDTCKSAKSTLDLIGHLYALQAGLSAEGSRETLLLIGG
Sequences:
>Translated_374_residues MKIWTALALGAALAPLLGACATPRATSPITQDTLTYSNEVATAQQRQLLLNIVKLRYNDPVSFVEIQTLTTEDFSGRGGS LTSAIGLDDGPFTEVLAGDAGFQRSETPTAVYNVLRGGAYAQQLLQPVAPESIFLLSQSGWSVERLMLCCVARIGDVDNA RAAAGPTPETVPDNSAFRGLARLMRRLQLSGDLLVQVMNDDEDKAARVVITWHTGSDDGEALARLFKEHDAAAEFTVEDG LYSAELATRSTRKGDSPLRGRSVLGMMAALSHAVDIPPEHEDFVIPINGPDAAPTPCAPVGVWTHVLGDYFGVSWSVEKP LTAAVSVPYRGVWFSIDDTCKSAKSTLDLIGHLYALQAGLSAEGSRETLLLIGG >Mature_374_residues MKIWTALALGAALAPLLGACATPRATSPITQDTLTYSNEVATAQQRQLLLNIVKLRYNDPVSFVEIQTLTTEDFSGRGGS LTSAIGLDDGPFTEVLAGDAGFQRSETPTAVYNVLRGGAYAQQLLQPVAPESIFLLSQSGWSVERLMLCCVARIGDVDNA RAAAGPTPETVPDNSAFRGLARLMRRLQLSGDLLVQVMNDDEDKAARVVITWHTGSDDGEALARLFKEHDAAAEFTVEDG LYSAELATRSTRKGDSPLRGRSVLGMMAALSHAVDIPPEHEDFVIPINGPDAAPTPCAPVGVWTHVLGDYFGVSWSVEKP LTAAVSVPYRGVWFSIDDTCKSAKSTLDLIGHLYALQAGLSAEGSRETLLLIGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39884; Mature: 39884
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIWTALALGAALAPLLGACATPRATSPITQDTLTYSNEVATAQQRQLLLNIVKLRYNDP CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC VSFVEIQTLTTEDFSGRGGSLTSAIGLDDGPFTEVLAGDAGFQRSETPTAVYNVLRGGAY CCEEEEEEEECCCCCCCCCCCEEECCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCHH AQQLLQPVAPESIFLLSQSGWSVERLMLCCVARIGDVDNARAAAGPTPETVPDNSAFRGL HHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH ARLMRRLQLSGDLLVQVMNDDEDKAARVVITWHTGSDDGEALARLFKEHDAAAEFTVEDG HHHHHHHHCCCCEEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCC LYSAELATRSTRKGDSPLRGRSVLGMMAALSHAVDIPPEHEDFVIPINGPDAAPTPCAPV CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCH GVWTHVLGDYFGVSWSVEKPLTAAVSVPYRGVWFSIDDTCKSAKSTLDLIGHLYALQAGL HHHHHHHHHHHCCCEECCCCCEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCC SAEGSRETLLLIGG CCCCCCCEEEEEEC >Mature Secondary Structure MKIWTALALGAALAPLLGACATPRATSPITQDTLTYSNEVATAQQRQLLLNIVKLRYNDP CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC VSFVEIQTLTTEDFSGRGGSLTSAIGLDDGPFTEVLAGDAGFQRSETPTAVYNVLRGGAY CCEEEEEEEECCCCCCCCCCCEEECCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCHH AQQLLQPVAPESIFLLSQSGWSVERLMLCCVARIGDVDNARAAAGPTPETVPDNSAFRGL HHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH ARLMRRLQLSGDLLVQVMNDDEDKAARVVITWHTGSDDGEALARLFKEHDAAAEFTVEDG HHHHHHHHCCCCEEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCC LYSAELATRSTRKGDSPLRGRSVLGMMAALSHAVDIPPEHEDFVIPINGPDAAPTPCAPV CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCH GVWTHVLGDYFGVSWSVEKPLTAAVSVPYRGVWFSIDDTCKSAKSTLDLIGHLYALQAGL HHHHHHHHHHHCCCEECCCCCEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCC SAEGSRETLLLIGG CCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA