| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799486
Identifier: 114799486
GI number: 114799486
Start: 1425405
End: 1426397
Strand: Reverse
Name: 114799486
Synonym: HNE_1399
Alternate gene names: NA
Gene position: 1426397-1425405 (Counterclockwise)
Preceding gene: 114798077
Following gene: 114798544
Centisome position: 38.5
GC content: 63.54
Gene sequence:
>993_bases ATGTTCAACAATACCGAATGGCTCAGCCAGGTGCGCGAAGATGTGGTCGATCCGGGCCGCGAGATTGTTGATCCCCACCA TCACCTCTGGCCGCGCCCGCATCTCTCCTATGATCTGGAGGAGCTGTGGTCGGACACACAGGATGGGCACAACGTGGTCC AGACGGTGTTCATGGAATGCGGCTCTGCCTATCGCAAGGAGGGGCCGGAGCAGATGCGGCCCGTGGGGGAGACAGAGTTT GTGACCGCTGCGGCGGAGCGCGCGGCCGCCGCGCCGGAGAAGGCGCAGATTGCGGCCATCATCGGCCATGCCGATCTGCG GCGGGACGATCTGGACGCCATTCTGGACGCGCATGAAGCCGCCGCGAAGGGACGCTTCCGGGGCATTCGCCATGCCGGAG CCTATGACGCCAATCCCGAAGCATTGAGCATCGGCGGGCGGGCACCGGCGGGGCTTTATGCGGACCCGGATTTCCGGCGG GGCGTCGCCCGGCTGGGCGAGCGGGGGATGACCTATGACACCTGGAACTATCACCATCAGATAACGGACTTTGCCGCCCT GGCCCGCGCGGTGCCCGGCACAACGATGATCCTTGACCATTTCGGAACGCCGCTGGGCGTTGGCCGGTATGAAGGCAAGC GGGAGGAGATTTTCGCCAAGTGGAAGGACGACATTGCGGAGGTCGCCGCCTGCCCGAATGTGCATGCCAAGCTTGGCGGC ATGGCGATGCCGGACAATGGCTATGGCTGGAATACGCGCGAGAAACCGCCGTCCTCGGATGAATTTGTGGAGGCGCAGGG CAAATGGTATGCCCATGCGATCGACTGCTTCGGACCGGAACGGTGCATGTTCGAAAGCAATTTCCCGGTCGACCGGCTGT CGATCAGCTATCGCACGCTGTGGAACGGGCTGAAGAAGATTGCCGCCGATTACCCTGAACCCGCGCAGGCGGCGCTGTTC AGCGGCACGGCGCGGAAGGTGTACAAGCTGTGA
Upstream 100 bases:
>100_bases CCTAGGGGAAAGGCCAAACCTGCTTGCCAATATGGCGCAATCCGCGTGAAGTTGGCCGCAGAAGCCGCGCTAGAGCGGCC TGTTGCGGGAGGAAGACGGG
Downstream 100 bases:
>100_bases GCGCGCTGCCGCCCCTGCCCGCCCAGCCTGCAGGCGTTGCCTGGCCGACGCAGGAATGGCCGGAGGGCACGCTTGCGCCC GCTGTCGCCGGAAAGCTGCA
Product: amidohydrolase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MFNNTEWLSQVREDVVDPGREIVDPHHHLWPRPHLSYDLEELWSDTQDGHNVVQTVFMECGSAYRKEGPEQMRPVGETEF VTAAAERAAAAPEKAQIAAIIGHADLRRDDLDAILDAHEAAAKGRFRGIRHAGAYDANPEALSIGGRAPAGLYADPDFRR GVARLGERGMTYDTWNYHHQITDFAALARAVPGTTMILDHFGTPLGVGRYEGKREEIFAKWKDDIAEVAACPNVHAKLGG MAMPDNGYGWNTREKPPSSDEFVEAQGKWYAHAIDCFGPERCMFESNFPVDRLSISYRTLWNGLKKIAADYPEPAQAALF SGTARKVYKL
Sequences:
>Translated_330_residues MFNNTEWLSQVREDVVDPGREIVDPHHHLWPRPHLSYDLEELWSDTQDGHNVVQTVFMECGSAYRKEGPEQMRPVGETEF VTAAAERAAAAPEKAQIAAIIGHADLRRDDLDAILDAHEAAAKGRFRGIRHAGAYDANPEALSIGGRAPAGLYADPDFRR GVARLGERGMTYDTWNYHHQITDFAALARAVPGTTMILDHFGTPLGVGRYEGKREEIFAKWKDDIAEVAACPNVHAKLGG MAMPDNGYGWNTREKPPSSDEFVEAQGKWYAHAIDCFGPERCMFESNFPVDRLSISYRTLWNGLKKIAADYPEPAQAALF SGTARKVYKL >Mature_330_residues MFNNTEWLSQVREDVVDPGREIVDPHHHLWPRPHLSYDLEELWSDTQDGHNVVQTVFMECGSAYRKEGPEQMRPVGETEF VTAAAERAAAAPEKAQIAAIIGHADLRRDDLDAILDAHEAAAKGRFRGIRHAGAYDANPEALSIGGRAPAGLYADPDFRR GVARLGERGMTYDTWNYHHQITDFAALARAVPGTTMILDHFGTPLGVGRYEGKREEIFAKWKDDIAEVAACPNVHAKLGG MAMPDNGYGWNTREKPPSSDEFVEAQGKWYAHAIDCFGPERCMFESNFPVDRLSISYRTLWNGLKKIAADYPEPAQAALF SGTARKVYKL
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006992 [H]
Pfam domain/function: PF04909 Amidohydro_2 [H]
EC number: NA
Molecular weight: Translated: 36768; Mature: 36768
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNNTEWLSQVREDVVDPGREIVDPHHHLWPRPHLSYDLEELWSDTQDGHNVVQTVFMEC CCCCHHHHHHHHHHHHCCCHHHCCCHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHH GSAYRKEGPEQMRPVGETEFVTAAAERAAAAPEKAQIAAIIGHADLRRDDLDAILDAHEA HHHHHHCCHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHCCHHHHHHHHHHHHH AAKGRFRGIRHAGAYDANPEALSIGGRAPAGLYADPDFRRGVARLGERGMTYDTWNYHHQ HHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHH ITDFAALARAVPGTTMILDHFGTPLGVGRYEGKREEIFAKWKDDIAEVAACPNVHAKLGG HHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCC MAMPDNGYGWNTREKPPSSDEFVEAQGKWYAHAIDCFGPERCMFESNFPVDRLSISYRTL EECCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCHHEECCCCCHHHHHHHHHHH WNGLKKIAADYPEPAQAALFSGTARKVYKL HHHHHHHHCCCCCHHHHHHHCCHHHHHHCC >Mature Secondary Structure MFNNTEWLSQVREDVVDPGREIVDPHHHLWPRPHLSYDLEELWSDTQDGHNVVQTVFMEC CCCCHHHHHHHHHHHHCCCHHHCCCHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHH GSAYRKEGPEQMRPVGETEFVTAAAERAAAAPEKAQIAAIIGHADLRRDDLDAILDAHEA HHHHHHCCHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHCCHHHHHHHHHHHHH AAKGRFRGIRHAGAYDANPEALSIGGRAPAGLYADPDFRRGVARLGERGMTYDTWNYHHQ HHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHH ITDFAALARAVPGTTMILDHFGTPLGVGRYEGKREEIFAKWKDDIAEVAACPNVHAKLGG HHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCC MAMPDNGYGWNTREKPPSSDEFVEAQGKWYAHAIDCFGPERCMFESNFPVDRLSISYRTL EECCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCHHEECCCCCHHHHHHHHHHH WNGLKKIAADYPEPAQAALFSGTARKVYKL HHHHHHHHCCCCCHHHHHHHCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]