| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799446
Identifier: 114799446
GI number: 114799446
Start: 1023565
End: 1024941
Strand: Direct
Name: 114799446
Synonym: HNE_1011
Alternate gene names: NA
Gene position: 1023565-1024941 (Clockwise)
Preceding gene: 114799196
Following gene: 114800242
Centisome position: 27.63
GC content: 61.37
Gene sequence:
>1377_bases ATGACGCAGGACCAGTGGAGCGAGCGCGAACAGCTGATTGCCGAGCGCGCCGAAGAGGTACGCCGGGGCCTGAGCACGTG GATGTCGTCCACGGCGGCAGGTGTGCGCAACTATATTCAGGATCAGACGCCCTCGGACATTCACCCGGACCAGCTGCGCG AAGCGATCAAGGCGGAGGAGCATGAGTTCCGCCATTATGAGGTGGATGACACCGAGGATGCGCGCACAAGCCATTCGGCC GCGATTATCGAGTTGCAGAGTTTCCGCCAGACGCATGGCGCGCAGATTGGTGAGCGCACGCCTGACATCAAGAAGAATGT CGAACAGGCCGTGGCCATCCTGATGTTCGTGATGCTGGTGGAGGGCGCGTTCAACGCGTTGCTGTTCAAGGACGCGCAGG CGTCTGGCCTTCTGGGCGGGCTGATGATCGCGTTCGGCGTGTCGGCGGTGAATGTGCTGTTTGGTGTTATCGCGGGCTTC TTTGGTCTGCGATACCTCAACCATCCGGCGCTGGCGGCGAAGATCATGGGCGGCGTGGTCGCCGGGATCTCGATCCTTTG CGGCATCTTCCTCAACTTCTTCGTCGCCCACTACCGCGACGCGGTGGAGCATGGGCTGGTGCAGGCCGAAGCGGCCGGGC GGATGGCGGAATTCTCGATGTTCGAAATCCCGCCGGGCAGTGTCATCGGGGGCATGTTTCCCAATATTTTCGGGCTCGAC AGTTTCGTGGCGTTGGCATTGCTTATCCTTGGGCTGACGGTTTTTGCCGTCGCCGTTTATGAGGGCTATGACCGTATATC CGACAAATATCCGGGCTATGGCCGCGTGTGGCGCAAGGAACGCAAAGCGTATGAGCGCCGCCAGCAGCTGCGCGAGGATC TGCGCAGTGACCTTTCGGATTATTTCTCCGCCAGCCGGTTGTGGTTCGAGACGCAGCTTTCGCGCCATGGCCAGGCCAAG CGCGAGATCGAGAAGGCAATGAATGTGATCGAGGCGCGGCGGGACATTGCTGTGGCGGTTGCCGCCAAGGCGGCCGATCA GGAGCGCGGGCTGAAAGTGGCCTATCGCCAGGCCCACCGACGTCAGCGCAATCAGCTGCGCGACAAGCTGGGCGAGCAGG CCGCGTGCCCGGTCTACTTCGACGAGATCCTGACACCGCAATTGCCCCCGTTCGATCTGGCCAAGGAGCGCACGCAGGCG AACGCTGCGATCAAGACCATCGAGCAGAATATCACGGCCTTGAACCTGACGCGTGAATGGCTGGAGACGCATATCCAGCA TGTGCAGCAGGGGCTTTCTTCGGTCGAGAAGAAGGTGGTTGAGGAGATTGCCAAGGTGCGTGACGCCAAGACCGGCGACG CCAAGAAGGCTGGCTGA
Upstream 100 bases:
>100_bases GAGAGGAAAGCGCGCCAAGGGCGATCTGGGGCTGAGCCGTGGCATGACCCGCAAGGAGGCGCGCCGCGACGCGGCCGACG CAATCCCGGTCTCCGAAGCA
Downstream 100 bases:
>100_bases GGAGGCTGACCGATGCCACGACGCAAGGAAAGAGGCCCCTGGTTCTGGCGCGGCGCGATTGCGCTGATGCTGACATCCGT ATTCGGATTGTTCGCGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 458; Mature: 457
Protein sequence:
>458_residues MTQDQWSEREQLIAERAEEVRRGLSTWMSSTAAGVRNYIQDQTPSDIHPDQLREAIKAEEHEFRHYEVDDTEDARTSHSA AIIELQSFRQTHGAQIGERTPDIKKNVEQAVAILMFVMLVEGAFNALLFKDAQASGLLGGLMIAFGVSAVNVLFGVIAGF FGLRYLNHPALAAKIMGGVVAGISILCGIFLNFFVAHYRDAVEHGLVQAEAAGRMAEFSMFEIPPGSVIGGMFPNIFGLD SFVALALLILGLTVFAVAVYEGYDRISDKYPGYGRVWRKERKAYERRQQLREDLRSDLSDYFSASRLWFETQLSRHGQAK REIEKAMNVIEARRDIAVAVAAKAADQERGLKVAYRQAHRRQRNQLRDKLGEQAACPVYFDEILTPQLPPFDLAKERTQA NAAIKTIEQNITALNLTREWLETHIQHVQQGLSSVEKKVVEEIAKVRDAKTGDAKKAG
Sequences:
>Translated_458_residues MTQDQWSEREQLIAERAEEVRRGLSTWMSSTAAGVRNYIQDQTPSDIHPDQLREAIKAEEHEFRHYEVDDTEDARTSHSA AIIELQSFRQTHGAQIGERTPDIKKNVEQAVAILMFVMLVEGAFNALLFKDAQASGLLGGLMIAFGVSAVNVLFGVIAGF FGLRYLNHPALAAKIMGGVVAGISILCGIFLNFFVAHYRDAVEHGLVQAEAAGRMAEFSMFEIPPGSVIGGMFPNIFGLD SFVALALLILGLTVFAVAVYEGYDRISDKYPGYGRVWRKERKAYERRQQLREDLRSDLSDYFSASRLWFETQLSRHGQAK REIEKAMNVIEARRDIAVAVAAKAADQERGLKVAYRQAHRRQRNQLRDKLGEQAACPVYFDEILTPQLPPFDLAKERTQA NAAIKTIEQNITALNLTREWLETHIQHVQQGLSSVEKKVVEEIAKVRDAKTGDAKKAG >Mature_457_residues TQDQWSEREQLIAERAEEVRRGLSTWMSSTAAGVRNYIQDQTPSDIHPDQLREAIKAEEHEFRHYEVDDTEDARTSHSAA IIELQSFRQTHGAQIGERTPDIKKNVEQAVAILMFVMLVEGAFNALLFKDAQASGLLGGLMIAFGVSAVNVLFGVIAGFF GLRYLNHPALAAKIMGGVVAGISILCGIFLNFFVAHYRDAVEHGLVQAEAAGRMAEFSMFEIPPGSVIGGMFPNIFGLDS FVALALLILGLTVFAVAVYEGYDRISDKYPGYGRVWRKERKAYERRQQLREDLRSDLSDYFSASRLWFETQLSRHGQAKR EIEKAMNVIEARRDIAVAVAAKAADQERGLKVAYRQAHRRQRNQLRDKLGEQAACPVYFDEILTPQLPPFDLAKERTQAN AAIKTIEQNITALNLTREWLETHIQHVQQGLSSVEKKVVEEIAKVRDAKTGDAKKAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51265; Mature: 51134
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQDQWSEREQLIAERAEEVRRGLSTWMSSTAAGVRNYIQDQTPSDIHPDQLREAIKAEE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH HEFRHYEVDDTEDARTSHSAAIIELQSFRQTHGAQIGERTPDIKKNVEQAVAILMFVMLV HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH EGAFNALLFKDAQASGLLGGLMIAFGVSAVNVLFGVIAGFFGLRYLNHPALAAKIMGGVV HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH AGISILCGIFLNFFVAHYRDAVEHGLVQAEAAGRMAEFSMFEIPPGSVIGGMFPNIFGLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCCHHHHHCCHHHCHH SFVALALLILGLTVFAVAVYEGYDRISDKYPGYGRVWRKERKAYERRQQLREDLRSDLSD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YFSASRLWFETQLSRHGQAKREIEKAMNVIEARRDIAVAVAAKAADQERGLKVAYRQAHR HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH RQRNQLRDKLGEQAACPVYFDEILTPQLPPFDLAKERTQANAAIKTIEQNITALNLTREW HHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LETHIQHVQQGLSSVEKKVVEEIAKVRDAKTGDAKKAG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TQDQWSEREQLIAERAEEVRRGLSTWMSSTAAGVRNYIQDQTPSDIHPDQLREAIKAEE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH HEFRHYEVDDTEDARTSHSAAIIELQSFRQTHGAQIGERTPDIKKNVEQAVAILMFVMLV HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH EGAFNALLFKDAQASGLLGGLMIAFGVSAVNVLFGVIAGFFGLRYLNHPALAAKIMGGVV HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH AGISILCGIFLNFFVAHYRDAVEHGLVQAEAAGRMAEFSMFEIPPGSVIGGMFPNIFGLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCCHHHHHCCHHHCHH SFVALALLILGLTVFAVAVYEGYDRISDKYPGYGRVWRKERKAYERRQQLREDLRSDLSD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YFSASRLWFETQLSRHGQAKREIEKAMNVIEARRDIAVAVAAKAADQERGLKVAYRQAHR HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH RQRNQLRDKLGEQAACPVYFDEILTPQLPPFDLAKERTQANAAIKTIEQNITALNLTREW HHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LETHIQHVQQGLSSVEKKVVEEIAKVRDAKTGDAKKAG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA