| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is ampH [C]
Identifier: 114799425
GI number: 114799425
Start: 2969503
End: 2970699
Strand: Reverse
Name: ampH [C]
Synonym: HNE_2809
Alternate gene names: 114799425
Gene position: 2970699-2969503 (Counterclockwise)
Preceding gene: 114797804
Following gene: 114798438
Centisome position: 80.18
GC content: 61.57
Gene sequence:
>1197_bases ATGAATGCTGAGCGGCTCGCCGCGATTCCGGAGTTCTTCCAGAAGAACTATCTCGACAGCGGCAAGCTGCCCTGCATGGC AACGCTGATCTCGCGCGGCGGCGAAGTCGCCCATGAGAGCTATATCGGCGCAACCGAAATGGGCGGCAGCCGCCCGATTG GCCCGGAGACAATCTTCCGCATCTATTCGATGACGAAGCCGGTCACCTCGCTCGCCATCATGATGCTGTTCGAGGAAGGA AAGCTGCGGCTGGAACATCCCGTCAGCCGCTACATTCCCGAATACAAGAACGTGAAAGTCTGGGACGGCGGCACGCGCGA CGCGCCCAAGCTGAAAGACCCCGACCGCGAAATGACGATCCTGGATCTGATGACCCACACGTCTGGTCTTACTTACGGCT TCCTGATGCAAGACGATACCGACGCGATCTACCGGCGTGAAAAGGTCGGCACGCCGAAACAGACATTGCAGGAAATGGCC CGCCAGATGGCGGGCCTGCCGCTTGCTTTCTCGCCCGGCACCGAATGGCGTTACAGCCACTCGATTGATGTGCTCGGCGC GATCGTTGAGGTCATCACCGGCCAGGAGCTGGATGCGTTCTTCCGCGAGCGGATTTTTGGCCCGCTGCAGATGAACGATA CCGATTTCTGGGTTGCCGAAGACAAGATCGACCGTCTGATGGCCTGCTATCAGAAAGATGCGCAGACAGGCGAGACAACG CTCGCCGATCCGGCCGGTGCGGCCTCGCGCCTTTACGCCAAGCGTCCGGTACAGCTCAATGCTGGCGGCGGGCTTGCCTC TACGGTGCGGGATTATCACCGCTTCGCCCTGATGCTGCTGCGCGGCGGCACGCTCGACGGCGCCCGCATCATCAGTCCCA AGACCTGGGAATTCATGCGCCAGAACCATCTGCCAGGTGGCCAGACCATGCGCGGCATGGGCCGCTCTGCGTTCACCGAG GTGATGTCGGAAGGCGTGGGCTTCGGGCTCGGCGGTTCGGTCGTCACCGACATCGTGGAAACCCGTCAGCCCGGCAGCGA CGGCACGTTCAGCTGGGGCGGCCTTGCCTCCACCTTCTTCTGGATCGACCCGGAAGAGGAGCTGATCGCCGTTCAGGCCA CCCAGCTTATGCCATCCTCCACCTATCCGATGCGCATGCAGCTTCAGCAGCTTGTCTATGCGGCGATTGACTGGTGA
Upstream 100 bases:
>100_bases AGATCCAGCAGATCATCATCGCGCGCGAACTGGCCCGCGCCGCCAAAGCAGGAAAACTCTGATGTTTGAACATGACATGG CCGACCCCGGCGAAGTGGGT
Downstream 100 bases:
>100_bases GCGAAGAACCGAAAAACGCCGTTCGCGAGGCCATCCTTGCGCTGACAGCTGCAAAAGGTGCTGGCAAAACCATCGCGCCA GAAGATGCAGCAAAAGCGAT
Product: beta-lactamase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MNAERLAAIPEFFQKNYLDSGKLPCMATLISRGGEVAHESYIGATEMGGSRPIGPETIFRIYSMTKPVTSLAIMMLFEEG KLRLEHPVSRYIPEYKNVKVWDGGTRDAPKLKDPDREMTILDLMTHTSGLTYGFLMQDDTDAIYRREKVGTPKQTLQEMA RQMAGLPLAFSPGTEWRYSHSIDVLGAIVEVITGQELDAFFRERIFGPLQMNDTDFWVAEDKIDRLMACYQKDAQTGETT LADPAGAASRLYAKRPVQLNAGGGLASTVRDYHRFALMLLRGGTLDGARIISPKTWEFMRQNHLPGGQTMRGMGRSAFTE VMSEGVGFGLGGSVVTDIVETRQPGSDGTFSWGGLASTFFWIDPEEELIAVQATQLMPSSTYPMRMQLQQLVYAAIDW
Sequences:
>Translated_398_residues MNAERLAAIPEFFQKNYLDSGKLPCMATLISRGGEVAHESYIGATEMGGSRPIGPETIFRIYSMTKPVTSLAIMMLFEEG KLRLEHPVSRYIPEYKNVKVWDGGTRDAPKLKDPDREMTILDLMTHTSGLTYGFLMQDDTDAIYRREKVGTPKQTLQEMA RQMAGLPLAFSPGTEWRYSHSIDVLGAIVEVITGQELDAFFRERIFGPLQMNDTDFWVAEDKIDRLMACYQKDAQTGETT LADPAGAASRLYAKRPVQLNAGGGLASTVRDYHRFALMLLRGGTLDGARIISPKTWEFMRQNHLPGGQTMRGMGRSAFTE VMSEGVGFGLGGSVVTDIVETRQPGSDGTFSWGGLASTFFWIDPEEELIAVQATQLMPSSTYPMRMQLQQLVYAAIDW >Mature_398_residues MNAERLAAIPEFFQKNYLDSGKLPCMATLISRGGEVAHESYIGATEMGGSRPIGPETIFRIYSMTKPVTSLAIMMLFEEG KLRLEHPVSRYIPEYKNVKVWDGGTRDAPKLKDPDREMTILDLMTHTSGLTYGFLMQDDTDAIYRREKVGTPKQTLQEMA RQMAGLPLAFSPGTEWRYSHSIDVLGAIVEVITGQELDAFFRERIFGPLQMNDTDFWVAEDKIDRLMACYQKDAQTGETT LADPAGAASRLYAKRPVQLNAGGGLASTVRDYHRFALMLLRGGTLDGARIISPKTWEFMRQNHLPGGQTMRGMGRSAFTE VMSEGVGFGLGGSVVTDIVETRQPGSDGTFSWGGLASTFFWIDPEEELIAVQATQLMPSSTYPMRMQLQQLVYAAIDW
Specific function: Binds Penicillin And Contributes To The Normal Morphology Of Escherichia Coli. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786574, Length=218, Percent_Identity=26.605504587156, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87082101, Length=228, Percent_Identity=28.9473684210526, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 44288; Mature: 44288
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAERLAAIPEFFQKNYLDSGKLPCMATLISRGGEVAHESYIGATEMGGSRPIGPETIFR CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHCCHHHCCCCCCCCHHHHHH IYSMTKPVTSLAIMMLFEEGKLRLEHPVSRYIPEYKNVKVWDGGTRDAPKLKDPDREMTI HHHHHHHHHHHHHHHHHHCCCEEECCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHH LDLMTHTSGLTYGFLMQDDTDAIYRREKVGTPKQTLQEMARQMAGLPLAFSPGTEWRYSH HHHHHHCCCCEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCCCCCEECC SIDVLGAIVEVITGQELDAFFRERIFGPLQMNDTDFWVAEDKIDRLMACYQKDAQTGETT CHHHHHHHHHHHCCCHHHHHHHHHCCCCCEECCCCEEEEHHHHHHHHHHHHHHCCCCCCC LADPAGAASRLYAKRPVQLNAGGGLASTVRDYHRFALMLLRGGTLDGARIISPKTWEFMR CCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHH QNHLPGGQTMRGMGRSAFTEVMSEGVGFGLGGSVVTDIVETRQPGSDGTFSWGGLASTFF HCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHCEEE WIDPEEELIAVQATQLMPSSTYPMRMQLQQLVYAAIDW EECCHHHEEEEEHHHHCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MNAERLAAIPEFFQKNYLDSGKLPCMATLISRGGEVAHESYIGATEMGGSRPIGPETIFR CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHCCHHHCCCCCCCCHHHHHH IYSMTKPVTSLAIMMLFEEGKLRLEHPVSRYIPEYKNVKVWDGGTRDAPKLKDPDREMTI HHHHHHHHHHHHHHHHHHCCCEEECCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHH LDLMTHTSGLTYGFLMQDDTDAIYRREKVGTPKQTLQEMARQMAGLPLAFSPGTEWRYSH HHHHHHCCCCEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCCCCCEECC SIDVLGAIVEVITGQELDAFFRERIFGPLQMNDTDFWVAEDKIDRLMACYQKDAQTGETT CHHHHHHHHHHHCCCHHHHHHHHHCCCCCEECCCCEEEEHHHHHHHHHHHHHHCCCCCCC LADPAGAASRLYAKRPVQLNAGGGLASTVRDYHRFALMLLRGGTLDGARIISPKTWEFMR CCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHH QNHLPGGQTMRGMGRSAFTEVMSEGVGFGLGGSVVTDIVETRQPGSDGTFSWGGLASTFF HCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHCEEE WIDPEEELIAVQATQLMPSSTYPMRMQLQQLVYAAIDW EECCHHHEEEEEHHHHCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]