| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is lpxA [H]
Identifier: 114799420
GI number: 114799420
Start: 1823540
End: 1824334
Strand: Direct
Name: lpxA [H]
Synonym: HNE_1779
Alternate gene names: 114799420
Gene position: 1823540-1824334 (Clockwise)
Preceding gene: 114798725
Following gene: 114797181
Centisome position: 49.22
GC content: 55.85
Gene sequence:
>795_bases ATGAGCGTTGAGGTGCACTCCACGGCCGTCGTTGAAAGCGGTGCCATTCTCCATGATGGCGTGCGGATCGGCCCATTCTG CCATGTGGGAGCCATGGCCGAGTTGGGCGCTGGCACTGAGCTCATTTCGCATGCGTCCGTTGTCGGACATACGAAGGTCG GCTCCAATTGCCTGCTTTATCCCCATGCCGTCCTCGGGTGTGGTCCGCAGGTTCTGGGAATGCGGGAAACACCCGATTCC ATGCTTGAGGTCGGCGCTGGCAGCGTCTTCCGTGAATACGCAACAGCCCATACGGGAATACCAAAACATGGAGGGCTGAC CAAAGTCGGAACCGCCTGCTACATCATGATTGGGGCTCATATCGCTCACGACTGCATAATTGGAAACAACGTGGTGATGG CAAATAATGTGTCCTTGGCGGGCCATATCACCGTTGGCGACAATGTCTGGTTTGGAGGGTTGGCCGCCGTGCATCAATTC AGCCGCATTGGCCGGAATGCCTTCATCGGCGGCGGCGCGATTGTCGTTGAGGATGTCATTCCATTCGGGTCGGTGGTGGG CAACCACGCAAAACTTTCGGGACTCAACATCGTTGGTTTGAAGCGGCGAGGATTTAGCAAATCCGATCTCCACGAAATTC GGTCAGCTTATAAGGCCGTGTTTGAAGGAAACGGTCTGTTCAAGGATAGGCTGGCTCAGGCGGCCGCGGAATACGCGGGG AAACCCTTGGCAATGGAACTTATCAATTTCATTCTGGAGGGCAGAGATCGCCCCATTTGCAAACCGGCGGAATGA
Upstream 100 bases:
>100_bases GCAGTGGATGCGGGAAGTCGCATGGTTGCAAAAACAGGCCAACCCCAAGAAAAGCAATTGACGGGCAATTACCTGTCTCG AAATGAGGAAAGGCCTCTCG
Downstream 100 bases:
>100_bases CATGCGCGAGCCTTTGGGTCTCATCGCAGGATTGGGAGAATTGCCGGTCGCAATTGCTGAGAATGCTGTAGCAACGGGGC AGGGTGTTTATGTCCTGCGT
Product: acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine acyltransferase [H]
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MSVEVHSTAVVESGAILHDGVRIGPFCHVGAMAELGAGTELISHASVVGHTKVGSNCLLYPHAVLGCGPQVLGMRETPDS MLEVGAGSVFREYATAHTGIPKHGGLTKVGTACYIMIGAHIAHDCIIGNNVVMANNVSLAGHITVGDNVWFGGLAAVHQF SRIGRNAFIGGGAIVVEDVIPFGSVVGNHAKLSGLNIVGLKRRGFSKSDLHEIRSAYKAVFEGNGLFKDRLAQAAAEYAG KPLAMELINFILEGRDRPICKPAE
Sequences:
>Translated_264_residues MSVEVHSTAVVESGAILHDGVRIGPFCHVGAMAELGAGTELISHASVVGHTKVGSNCLLYPHAVLGCGPQVLGMRETPDS MLEVGAGSVFREYATAHTGIPKHGGLTKVGTACYIMIGAHIAHDCIIGNNVVMANNVSLAGHITVGDNVWFGGLAAVHQF SRIGRNAFIGGGAIVVEDVIPFGSVVGNHAKLSGLNIVGLKRRGFSKSDLHEIRSAYKAVFEGNGLFKDRLAQAAAEYAG KPLAMELINFILEGRDRPICKPAE >Mature_263_residues SVEVHSTAVVESGAILHDGVRIGPFCHVGAMAELGAGTELISHASVVGHTKVGSNCLLYPHAVLGCGPQVLGMRETPDSM LEVGAGSVFREYATAHTGIPKHGGLTKVGTACYIMIGAHIAHDCIIGNNVVMANNVSLAGHITVGDNVWFGGLAAVHQFS RIGRNAFIGGGAIVVEDVIPFGSVVGNHAKLSGLNIVGLKRRGFSKSDLHEIRSAYKAVFEGNGLFKDRLAQAAAEYAGK PLAMELINFILEGRDRPICKPAE
Specific function: Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell [H]
COG id: COG1043
COG function: function code M; Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family. LpxA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786378, Length=238, Percent_Identity=45.7983193277311, Blast_Score=187, Evalue=7e-49, Organism=Escherichia coli, GI1786376, Length=174, Percent_Identity=29.3103448275862, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018357 - InterPro: IPR010137 - InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: =2.3.1.129 [H]
Molecular weight: Translated: 27612; Mature: 27481
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVEVHSTAVVESGAILHDGVRIGPFCHVGAMAELGAGTELISHASVVGHTKVGSNCLLY CCEEECCCEEEECCCEEECCEEECCEECCCHHHHHCCCHHHHHHHHHHCCCCCCCCEEEC PHAVLGCGPQVLGMRETPDSMLEVGAGSVFREYATAHTGIPKHGGLTKVGTACYIMIGAH CHHHHCCCHHHCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHEEEEEHHH IAHDCIIGNNVVMANNVSLAGHITVGDNVWFGGLAAVHQFSRIGRNAFIGGGAIVVEDVI HHHHEEECCCEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCEEECCCEEEEEHHH PFGSVVGNHAKLSGLNIVGLKRRGFSKSDLHEIRSAYKAVFEGNGLFKDRLAQAAAEYAG HHHHHHCCCEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC KPLAMELINFILEGRDRPICKPAE CCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SVEVHSTAVVESGAILHDGVRIGPFCHVGAMAELGAGTELISHASVVGHTKVGSNCLLY CEEECCCEEEECCCEEECCEEECCEECCCHHHHHCCCHHHHHHHHHHCCCCCCCCEEEC PHAVLGCGPQVLGMRETPDSMLEVGAGSVFREYATAHTGIPKHGGLTKVGTACYIMIGAH CHHHHCCCHHHCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHEEEEEHHH IAHDCIIGNNVVMANNVSLAGHITVGDNVWFGGLAAVHQFSRIGRNAFIGGGAIVVEDVI HHHHEEECCCEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCEEECCCEEEEEHHH PFGSVVGNHAKLSGLNIVGLKRRGFSKSDLHEIRSAYKAVFEGNGLFKDRLAQAAAEYAG HHHHHHCCCEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC KPLAMELINFILEGRDRPICKPAE CCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA