| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799397
Identifier: 114799397
GI number: 114799397
Start: 1767050
End: 1767850
Strand: Direct
Name: 114799397
Synonym: HNE_1724
Alternate gene names: NA
Gene position: 1767050-1767850 (Clockwise)
Preceding gene: 114800185
Following gene: 114797436
Centisome position: 47.69
GC content: 56.18
Gene sequence:
>801_bases ATGCCAATGTCCTTCACTCCGATTTCCCATGAACAGCGGTGGACCGGATCAACGTGGTCCGTTGATGATGAAGACACGTT AGCTGAGCTCATCGCTCGCATAGCGCTCGGTCAAGCGCAGACGGTTCAGTCAATCCTGCATGAGCTTGGCAACAAGCCTG TATCGCCCACTGCCGGGTTTGAAGGCGCCAAGGCGACGCTGACGGCGGCCACCGAGGACGAGATCTTCCATCGAGACGGC TGGGTCTTTCAAGTCATGGCCTGGATTGCCGCGCATCAGCAGGACGATACGGCGCTTATCCATGCGCCGCATATTCGGCT TGCTGACAAAGGGACGGATGGTTTGATCATCGAATTCCAAGATCGCGGTATCGCTCGTGTGGTGATCTGCGAAGAAAAGG CCACGGAGCACCCCCGCGACCGAGTGCGTGACAGCGTTTGGCCTGAATTCAAAACCTTTGAGTCGGGCCGCCGCGACAAT GAGTTGATCGCGGCGGTGAGCGACATGCTTTCCAAGAATGGCGTTGGGGACGCCGATGCGACCGTGGCGAGCATCTTTTG GAATAAGCAGCGGGCTTATCGCATCTCTACAATCGTAGGCGCGACGCATGCGACAGAGGCTGGCCGCAAGCGTCTGTTCA AAGACTATGAAAAGACGGTTCTTGGGGACTTGACGCGGCGTCGAGCAGAAACGCTTCATTTAGCCGATATCAGACCGTGG CTCGCCGAGCTTTCAAACAAAGCGATTGGATGGATAGAAGACGCAGAAGCGGTGCACGATTTGGAGGCAAAAGATGTATG A
Upstream 100 bases:
>100_bases CTCAAGGTGATCCCATGGATGTCATGGTCAACCATGTGCTTGAAATGGGCGTCGATCGTCCGCCGGGGCTCTATCCGCTG CCGGGTGAGGCGCGATAGCC
Downstream 100 bases:
>100_bases CCCTCAAACCGCAGCGCTTATTCGTCAGACACCAGAGCTACCAGGATTAGACCGCGAAGATTTGCCAGATGTGCTTTCAA GAGCGTATGCGGAGATCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MPMSFTPISHEQRWTGSTWSVDDEDTLAELIARIALGQAQTVQSILHELGNKPVSPTAGFEGAKATLTAATEDEIFHRDG WVFQVMAWIAAHQQDDTALIHAPHIRLADKGTDGLIIEFQDRGIARVVICEEKATEHPRDRVRDSVWPEFKTFESGRRDN ELIAAVSDMLSKNGVGDADATVASIFWNKQRAYRISTIVGATHATEAGRKRLFKDYEKTVLGDLTRRRAETLHLADIRPW LAELSNKAIGWIEDAEAVHDLEAKDV
Sequences:
>Translated_266_residues MPMSFTPISHEQRWTGSTWSVDDEDTLAELIARIALGQAQTVQSILHELGNKPVSPTAGFEGAKATLTAATEDEIFHRDG WVFQVMAWIAAHQQDDTALIHAPHIRLADKGTDGLIIEFQDRGIARVVICEEKATEHPRDRVRDSVWPEFKTFESGRRDN ELIAAVSDMLSKNGVGDADATVASIFWNKQRAYRISTIVGATHATEAGRKRLFKDYEKTVLGDLTRRRAETLHLADIRPW LAELSNKAIGWIEDAEAVHDLEAKDV >Mature_265_residues PMSFTPISHEQRWTGSTWSVDDEDTLAELIARIALGQAQTVQSILHELGNKPVSPTAGFEGAKATLTAATEDEIFHRDGW VFQVMAWIAAHQQDDTALIHAPHIRLADKGTDGLIIEFQDRGIARVVICEEKATEHPRDRVRDSVWPEFKTFESGRRDNE LIAAVSDMLSKNGVGDADATVASIFWNKQRAYRISTIVGATHATEAGRKRLFKDYEKTVLGDLTRRRAETLHLADIRPWL AELSNKAIGWIEDAEAVHDLEAKDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29707; Mature: 29575
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMSFTPISHEQRWTGSTWSVDDEDTLAELIARIALGQAQTVQSILHELGNKPVSPTAGF CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCC EGAKATLTAATEDEIFHRDGWVFQVMAWIAAHQQDDTALIHAPHIRLADKGTDGLIIEFQ CCCCEEEEECCCHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCEEEECCCCCCEEEEEC DRGIARVVICEEKATEHPRDRVRDSVWPEFKTFESGRRDNELIAAVSDMLSKNGVGDADA CCCEEEEEEECCCCCCCCHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHH TVASIFWNKQRAYRISTIVGATHATEAGRKRLFKDYEKTVLGDLTRRRAETLHLADIRPW HHHHHHHCCCHHEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAELSNKAIGWIEDAEAVHDLEAKDV HHHHCCCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure PMSFTPISHEQRWTGSTWSVDDEDTLAELIARIALGQAQTVQSILHELGNKPVSPTAGF CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCC EGAKATLTAATEDEIFHRDGWVFQVMAWIAAHQQDDTALIHAPHIRLADKGTDGLIIEFQ CCCCEEEEECCCHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCEEEECCCCCCEEEEEC DRGIARVVICEEKATEHPRDRVRDSVWPEFKTFESGRRDNELIAAVSDMLSKNGVGDADA CCCEEEEEEECCCCCCCCHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHH TVASIFWNKQRAYRISTIVGATHATEAGRKRLFKDYEKTVLGDLTRRRAETLHLADIRPW HHHHHHHCCCHHEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAELSNKAIGWIEDAEAVHDLEAKDV HHHHCCCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA