Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114799370

Identifier: 114799370

GI number: 114799370

Start: 13998

End: 14339

Strand: Direct

Name: 114799370

Synonym: HNE_0020

Alternate gene names: NA

Gene position: 13998-14339 (Clockwise)

Preceding gene: 114800170

Following gene: 114798480

Centisome position: 0.38

GC content: 55.26

Gene sequence:

>342_bases
ATGAAAGCTCTCACTGCCGCCGTTATCATCATCGCAGGATTGATCCCTGCTCAGACAGGATATTCCCAGATGGCCTCAGA
CCCTGAAGCAAGCTCCGTATCAGAACAGACCCACCCCTATGCCGGTATGTGGGTCACTGGCGATGGCTATATCCGCCATG
AACTTCTGCCTGACGGTCGCTATGATGAAGCGCGCGGCACGCGGCAGAGCGCCTATCAGGGGCGCTATGAAGTCCGTGGT
AACCACATCGACTATTGGGATAACACCGGGTTCACAGCCGATGGAGAATTCATCGACGGTGTGCTCCATCACGGCGGCAT
GATTTTTTACCGCGAGGAGTAA

Upstream 100 bases:

>100_bases
ACATGGTCACGGTTCCGGCAGGCTTCCCGCGCGCCATTTCCGCGTCACAGGTGCTCTCCGAACTTTTCGAGGAGCGCCGC
GCCGCAGCGGAGGGCGCGCC

Downstream 100 bases:

>100_bases
GCGGGAAGAGGGCTAGCCCTTCCGCTTCAGCGCGTAGTTGAAGCTCACCGAAATGCGCGCCTCCTCGCTCTGCCCCGGCA
TCACCTCATGGCGCAGCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MKALTAAVIIIAGLIPAQTGYSQMASDPEASSVSEQTHPYAGMWVTGDGYIRHELLPDGRYDEARGTRQSAYQGRYEVRG
NHIDYWDNTGFTADGEFIDGVLHHGGMIFYREE

Sequences:

>Translated_113_residues
MKALTAAVIIIAGLIPAQTGYSQMASDPEASSVSEQTHPYAGMWVTGDGYIRHELLPDGRYDEARGTRQSAYQGRYEVRG
NHIDYWDNTGFTADGEFIDGVLHHGGMIFYREE
>Mature_113_residues
MKALTAAVIIIAGLIPAQTGYSQMASDPEASSVSEQTHPYAGMWVTGDGYIRHELLPDGRYDEARGTRQSAYQGRYEVRG
NHIDYWDNTGFTADGEFIDGVLHHGGMIFYREE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12558; Mature: 12558

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALTAAVIIIAGLIPAQTGYSQMASDPEASSVSEQTHPYAGMWVTGDGYIRHELLPDGR
CCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCC
YDEARGTRQSAYQGRYEVRGNHIDYWDNTGFTADGEFIDGVLHHGGMIFYREE
CCCCCCCHHHHHCCCEEECCCEECCCCCCCCCCCCHHHHHHHHCCCEEEEECC
>Mature Secondary Structure
MKALTAAVIIIAGLIPAQTGYSQMASDPEASSVSEQTHPYAGMWVTGDGYIRHELLPDGR
CCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCC
YDEARGTRQSAYQGRYEVRGNHIDYWDNTGFTADGEFIDGVLHHGGMIFYREE
CCCCCCCHHHHHCCCEEECCCEECCCCCCCCCCCCHHHHHHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA