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The map label for this gene is ytsP [H]

Identifier: 114799359

GI number: 114799359

Start: 1229923

End: 1230390

Strand: Direct

Name: ytsP [H]

Synonym: HNE_1210

Alternate gene names: 114799359

Gene position: 1229923-1230390 (Clockwise)

Preceding gene: 114798554

Following gene: 114800544

Centisome position: 33.2

GC content: 64.53

Gene sequence:

>468_bases
ATGGACAAGGCTGAAGCCTATCGCCAGCTCAAGGAAGAAATCGACAGCGTCGTCGCCGGGGAGACCTCCGACACGGCGCG
CTACGCCTCGGCGGCCTGCCTGCTGGCCCAGGCCTTCAAGCCGCGCTTCTTCTGGACCGGGTTCTATCTGGTGGACCCCC
TGAAACCGCAGGAGCTTGTCGTCGGCCCGTACCAGGGCACCCTCGGCTGCCTGCGTATTCCGTTCGGCAAGGGGGTCTGC
GGCCATGTTGCGGCGACCCAGGCACCGGTCATCGTCCCCGATGTCCATGAGTTCCCCGGCCACATCGCCTGCGACTCTGC
TTCAAATTCCGAAATCGTCCTGCCGGTATTCCGCGCAGATGGCAGCCTTGCCGCCGTACTGGACGTGGACTCGACGCAGT
TCGATGCCTTCGACGCGGTTGACCAGGCGGGGCTCACCGCCATCTGCGAGAGCTTACTGACCGTCTGA

Upstream 100 bases:

>100_bases
GACGTCTGCAGCGCTCGCCCAGCTGATGGCGGCGGAATGATTGGACAAGCGCCCCGCAATACATATCTAAGGCCCTCGAA
ACCGATCAGAGGGTGCCCGA

Downstream 100 bases:

>100_bases
GGCAGGCTGCGGCAACGGTTCGGCAACAGGTTCGGTAGCTGGCTCGGGCGCTGGCAGGTTCGCATCATCTTCCGCTGGCA
CCTCCGCCGGCGCTGTTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MDKAEAYRQLKEEIDSVVAGETSDTARYASAACLLAQAFKPRFFWTGFYLVDPLKPQELVVGPYQGTLGCLRIPFGKGVC
GHVAATQAPVIVPDVHEFPGHIACDSASNSEIVLPVFRADGSLAAVLDVDSTQFDAFDAVDQAGLTAICESLLTV

Sequences:

>Translated_155_residues
MDKAEAYRQLKEEIDSVVAGETSDTARYASAACLLAQAFKPRFFWTGFYLVDPLKPQELVVGPYQGTLGCLRIPFGKGVC
GHVAATQAPVIVPDVHEFPGHIACDSASNSEIVLPVFRADGSLAAVLDVDSTQFDAFDAVDQAGLTAICESLLTV
>Mature_155_residues
MDKAEAYRQLKEEIDSVVAGETSDTARYASAACLLAQAFKPRFFWTGFYLVDPLKPQELVVGPYQGTLGCLRIPFGKGVC
GHVAATQAPVIVPDVHEFPGHIACDSASNSEIVLPVFRADGSLAAVLDVDSTQFDAFDAVDQAGLTAICESLLTV

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=152, Percent_Identity=44.078947368421, Blast_Score=124, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6322781, Length=151, Percent_Identity=37.0860927152318, Blast_Score=120, Evalue=6e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 16523; Mature: 16523

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS01320 UPF0067

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKAEAYRQLKEEIDSVVAGETSDTARYASAACLLAQAFKPRFFWTGFYLVDPLKPQELV
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCEE
VGPYQGTLGCLRIPFGKGVCGHVAATQAPVIVPDVHEFPGHIACDSASNSEIVLPVFRAD
EECCCCCEEEEECCCCCCCCCCHHHCCCCEECCCHHHCCCEEEECCCCCCEEEEEEEECC
GSLAAVLDVDSTQFDAFDAVDQAGLTAICESLLTV
CCEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure
MDKAEAYRQLKEEIDSVVAGETSDTARYASAACLLAQAFKPRFFWTGFYLVDPLKPQELV
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCEE
VGPYQGTLGCLRIPFGKGVCGHVAATQAPVIVPDVHEFPGHIACDSASNSEIVLPVFRAD
EECCCCCEEEEECCCCCCCCCCHHHCCCCEECCCHHHCCCEEEECCCCCCEEEEEEEECC
GSLAAVLDVDSTQFDAFDAVDQAGLTAICESLLTV
CCEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]