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The map label for this gene is intB [H]

Identifier: 114799339

GI number: 114799339

Start: 1628222

End: 1629451

Strand: Direct

Name: intB [H]

Synonym: HNE_1596

Alternate gene names: 114799339

Gene position: 1628222-1629451 (Clockwise)

Preceding gene: 114800425

Following gene: 114797198

Centisome position: 43.95

GC content: 62.36

Gene sequence:

>1230_bases
ATGGTACCATTGAGGGTCACCTCACCCCGTCCGTACCATACCATGCCGCTGACAGACCTTAAAATCCGCAGCCTCAAGCC
CGATGGAAAGCCTCGCCGCTACACCGATGGCGGCAATCTCTTCATCGAGGTACGCCCCAATGGCTCAAAGCTCTGGCGTT
TTGCCTACAAGTTCGACGGCAAGCAAAAGCTGATGGCGCTCGGCACCTATCCGGAAATCTCGCTTGCGAGAGCCCGGGAG
AAGCGGGCAGAAGCCCGCGCCCTATTAATCGAGGGTATCGACCCGATGCAGCAGGCCAAGGTGAACAAGCTGGAGCGGCA
GGCGCTCACTGAGCACACCTTTTCCGCCATCGCCGCAGAGCTCCTCGACAAGAACCGGCGCGAGGGTCTTGCCGGCGCCA
CGCTTTCGAAGAAGTCTTGGCTCGTCGGCATCGCCAATGCCGACCTTGGCGATTTGCCGGTCACGCAGATCAAGCCCACC
CATGTCCTCGTCCCTCTCCGCAAGGTGGAGTCAGAAGGCAACTACGAGACGGCCCGCCGGCTGCGCGCCGTAATCAGCCA
GGTCTTCCGTTACGCCGTCGCGACAGCCCGCGCCGAGCACGATCCGACGGCAGGCCTGCGCGGCGCGCTGATCGCTCCGA
AGGTCACCCACCGTCCCGCCATCGTGGACCGGGAGAAGTTTGCAGGCCTCATCCGATCGATCTGGGCCTATGACGGCGCG
ATCGAGACTAAGGCCGGGTTGCAGCTGATGGCGCTCCTCTATCCCCGGCCGGGCGAACTGCGTCTTTCCACTTGGGGCGA
ATTTGATCTCAGGAAGCGGACATGGACCATTCCGGCGGCGCGCACCAAAATGCGCCGGGAGCACAAGAAGCCACTCTCTG
GCGCTGCGGTCGAGATCCTGAAGCGCCTTCACGCTGTCACGGGGCATGAACCTTACGTCCTCGTTTCGCAGCTTTCGCGC
GGCAAACCGATCAGCGAGAACACGCTCAACGGATCCCTGCGCCGTCTGGGCTACGCCAAAGAAGAAATGACCTCGCACGG
ATTCCGCGCCAGCGCCTCAAGCCTGCTCAACGAAAGCGGCAAATGGCACCCTGACGCCATCGAAGCGGAACTCGCCCACA
TGGGCGCCGACCAAATCCGCAAGGCCTATCACCGCGCCACCTATTGGGATCAGCGCGTAGAAATGGCGGATTGGTGGGCC
GGAGAGGTCCTCCGTTTTGCGCGCTTGTGA

Upstream 100 bases:

>100_bases
AATACCAATAAAAACAATAGATTATGTTAAAAACCTGTCCGTAGCGATCCTCGGGGATCCGCCTGCGTCCGGAGGTTAGT
ATGGTACAGCCGCTGGTACC

Downstream 100 bases:

>100_bases
TGAGCCGATAGGATTTTCTTACTACCGTTCAACGTCTGTTGGCGCTCTTATGGTCGCAATCACCGCATTCCCTTGAACCA
CGACGTACGCACACAATTCG

Product: phage integrase family site specific recombinase

Products: NA

Alternate protein names: Int(P4) [H]

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MVPLRVTSPRPYHTMPLTDLKIRSLKPDGKPRRYTDGGNLFIEVRPNGSKLWRFAYKFDGKQKLMALGTYPEISLARARE
KRAEARALLIEGIDPMQQAKVNKLERQALTEHTFSAIAAELLDKNRREGLAGATLSKKSWLVGIANADLGDLPVTQIKPT
HVLVPLRKVESEGNYETARRLRAVISQVFRYAVATARAEHDPTAGLRGALIAPKVTHRPAIVDREKFAGLIRSIWAYDGA
IETKAGLQLMALLYPRPGELRLSTWGEFDLRKRTWTIPAARTKMRREHKKPLSGAAVEILKRLHAVTGHEPYVLVSQLSR
GKPISENTLNGSLRRLGYAKEEMTSHGFRASASSLLNESGKWHPDAIEAELAHMGADQIRKAYHRATYWDQRVEMADWWA
GEVLRFARL

Sequences:

>Translated_409_residues
MVPLRVTSPRPYHTMPLTDLKIRSLKPDGKPRRYTDGGNLFIEVRPNGSKLWRFAYKFDGKQKLMALGTYPEISLARARE
KRAEARALLIEGIDPMQQAKVNKLERQALTEHTFSAIAAELLDKNRREGLAGATLSKKSWLVGIANADLGDLPVTQIKPT
HVLVPLRKVESEGNYETARRLRAVISQVFRYAVATARAEHDPTAGLRGALIAPKVTHRPAIVDREKFAGLIRSIWAYDGA
IETKAGLQLMALLYPRPGELRLSTWGEFDLRKRTWTIPAARTKMRREHKKPLSGAAVEILKRLHAVTGHEPYVLVSQLSR
GKPISENTLNGSLRRLGYAKEEMTSHGFRASASSLLNESGKWHPDAIEAELAHMGADQIRKAYHRATYWDQRVEMADWWA
GEVLRFARL
>Mature_409_residues
MVPLRVTSPRPYHTMPLTDLKIRSLKPDGKPRRYTDGGNLFIEVRPNGSKLWRFAYKFDGKQKLMALGTYPEISLARARE
KRAEARALLIEGIDPMQQAKVNKLERQALTEHTFSAIAAELLDKNRREGLAGATLSKKSWLVGIANADLGDLPVTQIKPT
HVLVPLRKVESEGNYETARRLRAVISQVFRYAVATARAEHDPTAGLRGALIAPKVTHRPAIVDREKFAGLIRSIWAYDGA
IETKAGLQLMALLYPRPGELRLSTWGEFDLRKRTWTIPAARTKMRREHKKPLSGAAVEILKRLHAVTGHEPYVLVSQLSR
GKPISENTLNGSLRRLGYAKEEMTSHGFRASASSLLNESGKWHPDAIEAELAHMGADQIRKAYHRATYWDQRVEMADWWA
GEVLRFARL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI1788974, Length=394, Percent_Identity=31.9796954314721, Blast_Score=203, Evalue=2e-53,
Organism=Escherichia coli, GI1788690, Length=385, Percent_Identity=31.4285714285714, Blast_Score=194, Evalue=6e-51,
Organism=Escherichia coli, GI145693166, Length=395, Percent_Identity=34.4303797468354, Blast_Score=181, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 46071; Mature: 46071

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPLRVTSPRPYHTMPLTDLKIRSLKPDGKPRRYTDGGNLFIEVRPNGSKLWRFAYKFDG
CCCCEECCCCCCCCCCCCCCEEECCCCCCCCCEEECCCCEEEEEECCCCCEEEEEEEECC
KQKLMALGTYPEISLARAREKRAEARALLIEGIDPMQQAKVNKLERQALTEHTFSAIAAE
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LLDKNRREGLAGATLSKKSWLVGIANADLGDLPVTQIKPTHVLVPLRKVESEGNYETARR
HHHHHHHCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEHHHHCCCCCHHHHHH
LRAVISQVFRYAVATARAEHDPTAGLRGALIAPKVTHRPAIVDREKFAGLIRSIWAYDGA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCC
IETKAGLQLMALLYPRPGELRLSTWGEFDLRKRTWTIPAARTKMRREHKKPLSGAAVEIL
CCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEECCHHHHHHHHHHCCCCCHHHHHHH
KRLHAVTGHEPYVLVSQLSRGKPISENTLNGSLRRLGYAKEEMTSHGFRASASSLLNESG
HHHHHHCCCCCEEEEHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHCCCHHHHHHHHHCCC
KWHPDAIEAELAHMGADQIRKAYHRATYWDQRVEMADWWAGEVLRFARL
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVPLRVTSPRPYHTMPLTDLKIRSLKPDGKPRRYTDGGNLFIEVRPNGSKLWRFAYKFDG
CCCCEECCCCCCCCCCCCCCEEECCCCCCCCCEEECCCCEEEEEECCCCCEEEEEEEECC
KQKLMALGTYPEISLARAREKRAEARALLIEGIDPMQQAKVNKLERQALTEHTFSAIAAE
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LLDKNRREGLAGATLSKKSWLVGIANADLGDLPVTQIKPTHVLVPLRKVESEGNYETARR
HHHHHHHCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEHHHHCCCCCHHHHHH
LRAVISQVFRYAVATARAEHDPTAGLRGALIAPKVTHRPAIVDREKFAGLIRSIWAYDGA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCC
IETKAGLQLMALLYPRPGELRLSTWGEFDLRKRTWTIPAARTKMRREHKKPLSGAAVEIL
CCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEECCHHHHHHHHHHCCCCCHHHHHHH
KRLHAVTGHEPYVLVSQLSRGKPISENTLNGSLRRLGYAKEEMTSHGFRASASSLLNESG
HHHHHHCCCCCEEEEHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHCCCHHHHHHHHHCCC
KWHPDAIEAELAHMGADQIRKAYHRATYWDQRVEMADWWAGEVLRFARL
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]