| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799308
Identifier: 114799308
GI number: 114799308
Start: 2879936
End: 2881000
Strand: Direct
Name: 114799308
Synonym: HNE_2717
Alternate gene names: NA
Gene position: 2879936-2881000 (Clockwise)
Preceding gene: 114798751
Following gene: 114797772
Centisome position: 77.73
GC content: 64.79
Gene sequence:
>1065_bases ATGTGGCTGCGCAGAAGTCTCGTCTATGTCTCATTGTTAGTGATGCTGGCCGTGCTGTGGCTGGGCGTGGCAATCTTCGT GACGCTGAATGATCGCGGGATACCTGAGCGAAGGGTGGAGGTGGCAGAGCCCCTGCCCGCGGCCGAGGCGCCGCTCAAGC TGATGATCTGGAATATCGGCTATTCGGGGCTGGGCGAGGAATCCGATTTCCAGACCGATGGCGGCAAGATGCTGCGCCCG CCGAGCCGCGAGGCGGTGGAGAAAAACCTCGCCGGCATTCAGGCCGTGCTGCGCGAAGAGGCGCCGGATATTCTGATGAT GCAGGAACTCGCCGCGCCGGGTTTCCTCACTCACACTGTCGATGTGCTCTCCGGCGTGAAGGACGCCCTGCCGGGTTATG GCATGGTGTTTTCCTCCGACATCCGCACGCGCCTGCTGCCCGGCCCGCTGGGCCTGCGCCATGGGCTGGGCACGTTTGCG AAGGTGGCGGGGGAGCGCACGAAGCTGGTGCGCCTGACCGAGGAGCCCGAGCCGATCATGGGCTTCATCCAGCGGCGCTA TCATGTGCAGGTGACCGAGCTGGAAGTGTCCGGCGCGCCCTGGGTGATCATCAATGTCCACCTCTCCGCCTTTGATGAGG GCGCGGGCACGCGGATGCAGCAGGTGCGCGAGGTGCTCGACCTAGCCCAATCCCATTATCAGCAGGGCAAGGCCGTGGTG CTGGGCGGGGATTGGAACATGCGCCTGGCCGCGACCGACTTTGCCTATCAGAGCGACGAGAGCGCCCTCTTCTGGGTGCA TGATTTTCCGCGCGATGCCCTGCGGCCGGGCTGGCAGATTGTCATCGACCCGGCGGTGGCGACCACGCGCACCAATGAGC AGCCCTACAAGAGCGGCGTGAACTATACGACGATCATCGACGGGTTCATTGCCTCCCCCAACGTGACGGTGGAGGCGGTG CGCGGGCTGGATCTCGGCTTTGCGATTACCGATCACCAGCCGGTGGTGGCGACCTTCCGCCTGGCCGGGCCGGAAACAGA AGAGCCCGCTGCGCCGGCTGAGTGA
Upstream 100 bases:
>100_bases ACGCCATCGTGATCACTGCGTCAGCGGCGCGGATGGACAGCCCTGCCCGGCTCAGTTCAGATGGGGATGGGTGGGACCAA GGCTGACCGGGTGGGTGCAC
Downstream 100 bases:
>100_bases ACCTTTCACGGTCGCGGCGTGCAGATTTGCCCGGACGCGCAAGAGACGCGCAAGAATCGGGTCGCAGGTGGCGCGGGCCT CTGGCATCCCCCGCCGCAAC
Product: endonuclease/exonuclease/phosphatase family protein
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase; Metal-Dependent Hydrolase; Endonuclease/Exonuclease/Phosphatase Family
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MWLRRSLVYVSLLVMLAVLWLGVAIFVTLNDRGIPERRVEVAEPLPAAEAPLKLMIWNIGYSGLGEESDFQTDGGKMLRP PSREAVEKNLAGIQAVLREEAPDILMMQELAAPGFLTHTVDVLSGVKDALPGYGMVFSSDIRTRLLPGPLGLRHGLGTFA KVAGERTKLVRLTEEPEPIMGFIQRRYHVQVTELEVSGAPWVIINVHLSAFDEGAGTRMQQVREVLDLAQSHYQQGKAVV LGGDWNMRLAATDFAYQSDESALFWVHDFPRDALRPGWQIVIDPAVATTRTNEQPYKSGVNYTTIIDGFIASPNVTVEAV RGLDLGFAITDHQPVVATFRLAGPETEEPAAPAE
Sequences:
>Translated_354_residues MWLRRSLVYVSLLVMLAVLWLGVAIFVTLNDRGIPERRVEVAEPLPAAEAPLKLMIWNIGYSGLGEESDFQTDGGKMLRP PSREAVEKNLAGIQAVLREEAPDILMMQELAAPGFLTHTVDVLSGVKDALPGYGMVFSSDIRTRLLPGPLGLRHGLGTFA KVAGERTKLVRLTEEPEPIMGFIQRRYHVQVTELEVSGAPWVIINVHLSAFDEGAGTRMQQVREVLDLAQSHYQQGKAVV LGGDWNMRLAATDFAYQSDESALFWVHDFPRDALRPGWQIVIDPAVATTRTNEQPYKSGVNYTTIIDGFIASPNVTVEAV RGLDLGFAITDHQPVVATFRLAGPETEEPAAPAE >Mature_354_residues MWLRRSLVYVSLLVMLAVLWLGVAIFVTLNDRGIPERRVEVAEPLPAAEAPLKLMIWNIGYSGLGEESDFQTDGGKMLRP PSREAVEKNLAGIQAVLREEAPDILMMQELAAPGFLTHTVDVLSGVKDALPGYGMVFSSDIRTRLLPGPLGLRHGLGTFA KVAGERTKLVRLTEEPEPIMGFIQRRYHVQVTELEVSGAPWVIINVHLSAFDEGAGTRMQQVREVLDLAQSHYQQGKAVV LGGDWNMRLAATDFAYQSDESALFWVHDFPRDALRPGWQIVIDPAVATTRTNEQPYKSGVNYTTIIDGFIASPNVTVEAV RGLDLGFAITDHQPVVATFRLAGPETEEPAAPAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38921; Mature: 38921
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWLRRSLVYVSLLVMLAVLWLGVAIFVTLNDRGIPERRVEVAEPLPAAEAPLKLMIWNIG CCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHCCCCCCCCCCEEEEEEECC YSGLGEESDFQTDGGKMLRPPSREAVEKNLAGIQAVLREEAPDILMMQELAAPGFLTHTV CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHH DVLSGVKDALPGYGMVFSSDIRTRLLPGPLGLRHGLGTFAKVAGERTKLVRLTEEPEPIM HHHHHHHHHCCCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHH GFIQRRYHVQVTELEVSGAPWVIINVHLSAFDEGAGTRMQQVREVLDLAQSHYQQGKAVV HHHHHHHEEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEE LGGDWNMRLAATDFAYQSDESALFWVHDFPRDALRPGWQIVIDPAVATTRTNEQPYKSGV EECCCCEEEEEEECCCCCCCCEEEEEECCCHHHHCCCCEEEECCCEEECCCCCCHHHCCC NYTTIIDGFIASPNVTVEAVRGLDLGFAITDHQPVVATFRLAGPETEEPAAPAE CEEEEEECEECCCCCEEEEECCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MWLRRSLVYVSLLVMLAVLWLGVAIFVTLNDRGIPERRVEVAEPLPAAEAPLKLMIWNIG CCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHCCCCCCCCCCEEEEEEECC YSGLGEESDFQTDGGKMLRPPSREAVEKNLAGIQAVLREEAPDILMMQELAAPGFLTHTV CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHH DVLSGVKDALPGYGMVFSSDIRTRLLPGPLGLRHGLGTFAKVAGERTKLVRLTEEPEPIM HHHHHHHHHCCCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHH GFIQRRYHVQVTELEVSGAPWVIINVHLSAFDEGAGTRMQQVREVLDLAQSHYQQGKAVV HHHHHHHEEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEE LGGDWNMRLAATDFAYQSDESALFWVHDFPRDALRPGWQIVIDPAVATTRTNEQPYKSGV EECCCCEEEEEEECCCCCCCCEEEEEECCCHHHHCCCCEEEECCCEEECCCCCCHHHCCC NYTTIIDGFIASPNVTVEAVRGLDLGFAITDHQPVVATFRLAGPETEEPAAPAE CEEEEEECEECCCCCEEEEECCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA