| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799304
Identifier: 114799304
GI number: 114799304
Start: 2906263
End: 2908296
Strand: Reverse
Name: 114799304
Synonym: HNE_2745
Alternate gene names: NA
Gene position: 2908296-2906263 (Counterclockwise)
Preceding gene: 114798399
Following gene: 114797171
Centisome position: 78.5
GC content: 62.83
Gene sequence:
>2034_bases ATGTTGCTGCTTCGCGTGGTTCTGGTTTCACTTCTGGCGCTGCTGTCCTTGGCGGCGCCGGCATTGGCCGAAGGGCCGCC CTATCCCGGCCAGGTGGTGCACGGGTTTGACTATGGCAGCGAACGGGTCTCGCGCGGGGACTGGAAAGCCTGTCAGGAGC TCTGTAATGGCAACGGTGCCTGCAGGGTCTGGTCGATCATGTCGAATGAGGGCAAGCGGGATTCGGTCTGCTATCTAAAG CATTCTGAAGGCAAGTTTGAGCCCTGGGCCACCATCGACAGTGGCCTGCGCACAGCCCCTCTCGTCAAAGCGGGCGGGGC ACCTGACCAGGGCCACGGCTTTTCGGAGAATGACATCACCAGCGTCGGCGTTGACCGCGATGACTGGAAGACCTGCGAAG CGGCCTGCAACCTGAACGGCGCCTGCAAGGCCTGGAGCCTCTATTCACCCCCGAATCATGAACAGTCCTATTGCTGGATC AAAGACGCCGTGGGCGAACGCAAGCCGCTGATCTATACCGATTCCGGGTTGAAGACGCAGCAGACCCCCATTCCCGATCC CGGCAAGCAGGTGAAGGGCAAGGCTTTCTCCGGCGCGGTGGTGATCGACCGAAGCCTCAAGGCAGAGGATGTGCAGGCCT GCAAGGCGAGCTGCGAGGGCAACCGGCAATGCGTGGCCTGGACCTTGTTCAATCCGGAAAAGAAGTCCTATCCCGCGCGC TGCCATGGCTATGCCTGGGCTGGCGAGCAGGTGAAGTTCAAGCGCGCCGTCTCGGCCTGGCGCGAAGCGCCGGTGCTGGC GGAAGTCGCGCCGCCGACGGGCGACGAGATGCTGCGCTGGAGATCGCTTGAGGAGGTGGTCGCCGAGTTTGCGCCTAAGA TCACGCCGCGCGCGCTTACGGTGGCTGAAAAGGCCGAGATTGCCGGGCTGGAGCTGGCCTATCTCCAGGGCGGATCGTTC GACTACTTCCGCAAGCTCGACGCCCTCGCGCGCACCGGCGACAAGGCCGCGATGAAGGCGATGATCAACATTCTTCTGGA AACCGGCTTCGGCTATAACCGGGACTGGCCGGCGGATTTTCCCTACAAGGTACGCGCCACGCAGAGCTTCGGCGAGCGCA CCCCAGGGGCGACGCCACTACAGAGAACGACCGCGCTCGCCTTGGCGATGCCCTGGGCGGTGCAATACTGGCAGTTGCAC GGAGGCGACCCCAAGGCGGCGATGGCGCTGACCCAGTGTGCAAACTCGAACCAGGGCCGCCACTATCAGTATGACTGCGG CTTCACGCTCTCCTACAACGGCAAGAGCAACGCGCAGGCGCTGAGCCAATATGCGTTCGGCGATACAAAAACGCCGCCGG ACATCGTGCTGGCCACCCATGAGCCCGCCTCGAGTGTGGAGATGGAACAATACCGCTTCACTGTCGAACGGGCGCGGTAT GAGACGCTGGTGAATACGCGGCGGAGCGGGCAGAAACTGCTCGACCTCGACGCCAACTGGCTGAACAAGTATGCCGAAGC CATGGGCCTGACCGACTCGATGAACGCCTCGATCGCGCAGGGCGAAGCCATCCGTATGCAGATGGCGGCGCAAGACGCCG AACGCCGCCGCCGCGACCTGCAGGGGAGCTGGGACAATCTTTACCGCCGCCATCTCAGCGGCGCTATCACGCCGGAGGAC ATCTCCTCGATGGAATATATCGCCGCCACTTTCGAGGACGAGAAGCTGATCTGGTTCTCGGACAATTATGGCCTCACCAG CGACTATGCGCTGCGCCGTCTGTGCATCGTCGATACCTCGACCGCCCGCTGCCAGAATCAGACCAACCGTATAAACAAGG CAGCAGCGGATGCGGCGGCGCTGGCGGCCTATGTGGCCGACCACAATGCCGGGGTGGACGCCGCGCGGCGGGCGGGGCTT CAATCTTCGCTGAACACGGTGGAAGTGCGCACCTACAATTCCAACGGCATCTACACTGGCACCACGACCATGTCGCAAAC CCAGGCCGAGATCATCGGTGCCAGGCCGCAATAA
Upstream 100 bases:
>100_bases CGGGTCTTCATATCCCCCCGGTCAGGGGTGTTGACGAAACTGCCGGGCTGATCCCTCATGGCGCGCCGCTGGCAGATGGT CGGCCTTGGGGGGATCTGAC
Downstream 100 bases:
>100_bases TTTTCTATTCAGGGAGGCGGCGGCAGACCGCACCGGTTCCCGTCAATAAGAAGATCCGTCCCCGGACGGCGTCCGCCCTC GAGCATGCGGCGGGTGATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 677; Mature: 677
Protein sequence:
>677_residues MLLLRVVLVSLLALLSLAAPALAEGPPYPGQVVHGFDYGSERVSRGDWKACQELCNGNGACRVWSIMSNEGKRDSVCYLK HSEGKFEPWATIDSGLRTAPLVKAGGAPDQGHGFSENDITSVGVDRDDWKTCEAACNLNGACKAWSLYSPPNHEQSYCWI KDAVGERKPLIYTDSGLKTQQTPIPDPGKQVKGKAFSGAVVIDRSLKAEDVQACKASCEGNRQCVAWTLFNPEKKSYPAR CHGYAWAGEQVKFKRAVSAWREAPVLAEVAPPTGDEMLRWRSLEEVVAEFAPKITPRALTVAEKAEIAGLELAYLQGGSF DYFRKLDALARTGDKAAMKAMINILLETGFGYNRDWPADFPYKVRATQSFGERTPGATPLQRTTALALAMPWAVQYWQLH GGDPKAAMALTQCANSNQGRHYQYDCGFTLSYNGKSNAQALSQYAFGDTKTPPDIVLATHEPASSVEMEQYRFTVERARY ETLVNTRRSGQKLLDLDANWLNKYAEAMGLTDSMNASIAQGEAIRMQMAAQDAERRRRDLQGSWDNLYRRHLSGAITPED ISSMEYIAATFEDEKLIWFSDNYGLTSDYALRRLCIVDTSTARCQNQTNRINKAAADAAALAAYVADHNAGVDAARRAGL QSSLNTVEVRTYNSNGIYTGTTTMSQTQAEIIGARPQ
Sequences:
>Translated_677_residues MLLLRVVLVSLLALLSLAAPALAEGPPYPGQVVHGFDYGSERVSRGDWKACQELCNGNGACRVWSIMSNEGKRDSVCYLK HSEGKFEPWATIDSGLRTAPLVKAGGAPDQGHGFSENDITSVGVDRDDWKTCEAACNLNGACKAWSLYSPPNHEQSYCWI KDAVGERKPLIYTDSGLKTQQTPIPDPGKQVKGKAFSGAVVIDRSLKAEDVQACKASCEGNRQCVAWTLFNPEKKSYPAR CHGYAWAGEQVKFKRAVSAWREAPVLAEVAPPTGDEMLRWRSLEEVVAEFAPKITPRALTVAEKAEIAGLELAYLQGGSF DYFRKLDALARTGDKAAMKAMINILLETGFGYNRDWPADFPYKVRATQSFGERTPGATPLQRTTALALAMPWAVQYWQLH GGDPKAAMALTQCANSNQGRHYQYDCGFTLSYNGKSNAQALSQYAFGDTKTPPDIVLATHEPASSVEMEQYRFTVERARY ETLVNTRRSGQKLLDLDANWLNKYAEAMGLTDSMNASIAQGEAIRMQMAAQDAERRRRDLQGSWDNLYRRHLSGAITPED ISSMEYIAATFEDEKLIWFSDNYGLTSDYALRRLCIVDTSTARCQNQTNRINKAAADAAALAAYVADHNAGVDAARRAGL QSSLNTVEVRTYNSNGIYTGTTTMSQTQAEIIGARPQ >Mature_677_residues MLLLRVVLVSLLALLSLAAPALAEGPPYPGQVVHGFDYGSERVSRGDWKACQELCNGNGACRVWSIMSNEGKRDSVCYLK HSEGKFEPWATIDSGLRTAPLVKAGGAPDQGHGFSENDITSVGVDRDDWKTCEAACNLNGACKAWSLYSPPNHEQSYCWI KDAVGERKPLIYTDSGLKTQQTPIPDPGKQVKGKAFSGAVVIDRSLKAEDVQACKASCEGNRQCVAWTLFNPEKKSYPAR CHGYAWAGEQVKFKRAVSAWREAPVLAEVAPPTGDEMLRWRSLEEVVAEFAPKITPRALTVAEKAEIAGLELAYLQGGSF DYFRKLDALARTGDKAAMKAMINILLETGFGYNRDWPADFPYKVRATQSFGERTPGATPLQRTTALALAMPWAVQYWQLH GGDPKAAMALTQCANSNQGRHYQYDCGFTLSYNGKSNAQALSQYAFGDTKTPPDIVLATHEPASSVEMEQYRFTVERARY ETLVNTRRSGQKLLDLDANWLNKYAEAMGLTDSMNASIAQGEAIRMQMAAQDAERRRRDLQGSWDNLYRRHLSGAITPED ISSMEYIAATFEDEKLIWFSDNYGLTSDYALRRLCIVDTSTARCQNQTNRINKAAADAAALAAYVADHNAGVDAARRAGL QSSLNTVEVRTYNSNGIYTGTTTMSQTQAEIIGARPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74488; Mature: 74488
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLRVVLVSLLALLSLAAPALAEGPPYPGQVVHGFDYGSERVSRGDWKACQELCNGNGA CHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEECCCCHHHCCCCCHHHHHHHHCCCCC CRVWSIMSNEGKRDSVCYLKHSEGKFEPWATIDSGLRTAPLVKAGGAPDQGHGFSENDIT EEEEEEECCCCCCCCEEEEECCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCCCCCCCE SVGVDRDDWKTCEAACNLNGACKAWSLYSPPNHEQSYCWIKDAVGERKPLIYTDSGLKTQ ECCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEEEHHCCCCCCEEEECCCCCCC QTPIPDPGKQVKGKAFSGAVVIDRSLKAEDVQACKASCEGNRQCVAWTLFNPEKKSYPAR CCCCCCCCHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCC CHGYAWAGEQVKFKRAVSAWREAPVLAEVAPPTGDEMLRWRSLEEVVAEFAPKITPRALT CCCEEECCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHEE VAEKAEIAGLELAYLQGGSFDYFRKLDALARTGDKAAMKAMINILLETGFGYNRDWPADF HHHHHHHCCEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCC PYKVRATQSFGERTPGATPLQRTTALALAMPWAVQYWQLHGGDPKAAMALTQCANSNQGR CEEEEECHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHCCCCCC HYQYDCGFTLSYNGKSNAQALSQYAFGDTKTPPDIVLATHEPASSVEMEQYRFTVERARY EEEEECCEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH ETLVNTRRSGQKLLDLDANWLNKYAEAMGLTDSMNASIAQGEAIRMQMAAQDAERRRRDL HHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHC QGSWDNLYRRHLSGAITPEDISSMEYIAATFEDEKLIWFSDNYGLTSDYALRRLCIVDTS CCCHHHHHHHHHCCCCCHHHHHHHHHHEEEECCCEEEEEECCCCCCHHHHHHEEEEEECC TARCQNQTNRINKAAADAAALAAYVADHNAGVDAARRAGLQSSLNTVEVRTYNSNGIYTG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHCCCEEEEEEECCCCEEEC TTTMSQTQAEIIGARPQ CCCCCHHHHHHHCCCCC >Mature Secondary Structure MLLLRVVLVSLLALLSLAAPALAEGPPYPGQVVHGFDYGSERVSRGDWKACQELCNGNGA CHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEECCCCHHHCCCCCHHHHHHHHCCCCC CRVWSIMSNEGKRDSVCYLKHSEGKFEPWATIDSGLRTAPLVKAGGAPDQGHGFSENDIT EEEEEEECCCCCCCCEEEEECCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCCCCCCCE SVGVDRDDWKTCEAACNLNGACKAWSLYSPPNHEQSYCWIKDAVGERKPLIYTDSGLKTQ ECCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEEEHHCCCCCCEEEECCCCCCC QTPIPDPGKQVKGKAFSGAVVIDRSLKAEDVQACKASCEGNRQCVAWTLFNPEKKSYPAR CCCCCCCCHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCC CHGYAWAGEQVKFKRAVSAWREAPVLAEVAPPTGDEMLRWRSLEEVVAEFAPKITPRALT CCCEEECCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHEE VAEKAEIAGLELAYLQGGSFDYFRKLDALARTGDKAAMKAMINILLETGFGYNRDWPADF HHHHHHHCCEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCC PYKVRATQSFGERTPGATPLQRTTALALAMPWAVQYWQLHGGDPKAAMALTQCANSNQGR CEEEEECHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHCCCCCC HYQYDCGFTLSYNGKSNAQALSQYAFGDTKTPPDIVLATHEPASSVEMEQYRFTVERARY EEEEECCEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH ETLVNTRRSGQKLLDLDANWLNKYAEAMGLTDSMNASIAQGEAIRMQMAAQDAERRRRDL HHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHC QGSWDNLYRRHLSGAITPEDISSMEYIAATFEDEKLIWFSDNYGLTSDYALRRLCIVDTS CCCHHHHHHHHHCCCCCHHHHHHHHHHEEEECCCEEEEEECCCCCCHHHHHHEEEEEECC TARCQNQTNRINKAAADAAALAAYVADHNAGVDAARRAGLQSSLNTVEVRTYNSNGIYTG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHCCCEEEEEEECCCCEEEC TTTMSQTQAEIIGARPQ CCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA