Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114799304

Identifier: 114799304

GI number: 114799304

Start: 2906263

End: 2908296

Strand: Reverse

Name: 114799304

Synonym: HNE_2745

Alternate gene names: NA

Gene position: 2908296-2906263 (Counterclockwise)

Preceding gene: 114798399

Following gene: 114797171

Centisome position: 78.5

GC content: 62.83

Gene sequence:

>2034_bases
ATGTTGCTGCTTCGCGTGGTTCTGGTTTCACTTCTGGCGCTGCTGTCCTTGGCGGCGCCGGCATTGGCCGAAGGGCCGCC
CTATCCCGGCCAGGTGGTGCACGGGTTTGACTATGGCAGCGAACGGGTCTCGCGCGGGGACTGGAAAGCCTGTCAGGAGC
TCTGTAATGGCAACGGTGCCTGCAGGGTCTGGTCGATCATGTCGAATGAGGGCAAGCGGGATTCGGTCTGCTATCTAAAG
CATTCTGAAGGCAAGTTTGAGCCCTGGGCCACCATCGACAGTGGCCTGCGCACAGCCCCTCTCGTCAAAGCGGGCGGGGC
ACCTGACCAGGGCCACGGCTTTTCGGAGAATGACATCACCAGCGTCGGCGTTGACCGCGATGACTGGAAGACCTGCGAAG
CGGCCTGCAACCTGAACGGCGCCTGCAAGGCCTGGAGCCTCTATTCACCCCCGAATCATGAACAGTCCTATTGCTGGATC
AAAGACGCCGTGGGCGAACGCAAGCCGCTGATCTATACCGATTCCGGGTTGAAGACGCAGCAGACCCCCATTCCCGATCC
CGGCAAGCAGGTGAAGGGCAAGGCTTTCTCCGGCGCGGTGGTGATCGACCGAAGCCTCAAGGCAGAGGATGTGCAGGCCT
GCAAGGCGAGCTGCGAGGGCAACCGGCAATGCGTGGCCTGGACCTTGTTCAATCCGGAAAAGAAGTCCTATCCCGCGCGC
TGCCATGGCTATGCCTGGGCTGGCGAGCAGGTGAAGTTCAAGCGCGCCGTCTCGGCCTGGCGCGAAGCGCCGGTGCTGGC
GGAAGTCGCGCCGCCGACGGGCGACGAGATGCTGCGCTGGAGATCGCTTGAGGAGGTGGTCGCCGAGTTTGCGCCTAAGA
TCACGCCGCGCGCGCTTACGGTGGCTGAAAAGGCCGAGATTGCCGGGCTGGAGCTGGCCTATCTCCAGGGCGGATCGTTC
GACTACTTCCGCAAGCTCGACGCCCTCGCGCGCACCGGCGACAAGGCCGCGATGAAGGCGATGATCAACATTCTTCTGGA
AACCGGCTTCGGCTATAACCGGGACTGGCCGGCGGATTTTCCCTACAAGGTACGCGCCACGCAGAGCTTCGGCGAGCGCA
CCCCAGGGGCGACGCCACTACAGAGAACGACCGCGCTCGCCTTGGCGATGCCCTGGGCGGTGCAATACTGGCAGTTGCAC
GGAGGCGACCCCAAGGCGGCGATGGCGCTGACCCAGTGTGCAAACTCGAACCAGGGCCGCCACTATCAGTATGACTGCGG
CTTCACGCTCTCCTACAACGGCAAGAGCAACGCGCAGGCGCTGAGCCAATATGCGTTCGGCGATACAAAAACGCCGCCGG
ACATCGTGCTGGCCACCCATGAGCCCGCCTCGAGTGTGGAGATGGAACAATACCGCTTCACTGTCGAACGGGCGCGGTAT
GAGACGCTGGTGAATACGCGGCGGAGCGGGCAGAAACTGCTCGACCTCGACGCCAACTGGCTGAACAAGTATGCCGAAGC
CATGGGCCTGACCGACTCGATGAACGCCTCGATCGCGCAGGGCGAAGCCATCCGTATGCAGATGGCGGCGCAAGACGCCG
AACGCCGCCGCCGCGACCTGCAGGGGAGCTGGGACAATCTTTACCGCCGCCATCTCAGCGGCGCTATCACGCCGGAGGAC
ATCTCCTCGATGGAATATATCGCCGCCACTTTCGAGGACGAGAAGCTGATCTGGTTCTCGGACAATTATGGCCTCACCAG
CGACTATGCGCTGCGCCGTCTGTGCATCGTCGATACCTCGACCGCCCGCTGCCAGAATCAGACCAACCGTATAAACAAGG
CAGCAGCGGATGCGGCGGCGCTGGCGGCCTATGTGGCCGACCACAATGCCGGGGTGGACGCCGCGCGGCGGGCGGGGCTT
CAATCTTCGCTGAACACGGTGGAAGTGCGCACCTACAATTCCAACGGCATCTACACTGGCACCACGACCATGTCGCAAAC
CCAGGCCGAGATCATCGGTGCCAGGCCGCAATAA

Upstream 100 bases:

>100_bases
CGGGTCTTCATATCCCCCCGGTCAGGGGTGTTGACGAAACTGCCGGGCTGATCCCTCATGGCGCGCCGCTGGCAGATGGT
CGGCCTTGGGGGGATCTGAC

Downstream 100 bases:

>100_bases
TTTTCTATTCAGGGAGGCGGCGGCAGACCGCACCGGTTCCCGTCAATAAGAAGATCCGTCCCCGGACGGCGTCCGCCCTC
GAGCATGCGGCGGGTGATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 677; Mature: 677

Protein sequence:

>677_residues
MLLLRVVLVSLLALLSLAAPALAEGPPYPGQVVHGFDYGSERVSRGDWKACQELCNGNGACRVWSIMSNEGKRDSVCYLK
HSEGKFEPWATIDSGLRTAPLVKAGGAPDQGHGFSENDITSVGVDRDDWKTCEAACNLNGACKAWSLYSPPNHEQSYCWI
KDAVGERKPLIYTDSGLKTQQTPIPDPGKQVKGKAFSGAVVIDRSLKAEDVQACKASCEGNRQCVAWTLFNPEKKSYPAR
CHGYAWAGEQVKFKRAVSAWREAPVLAEVAPPTGDEMLRWRSLEEVVAEFAPKITPRALTVAEKAEIAGLELAYLQGGSF
DYFRKLDALARTGDKAAMKAMINILLETGFGYNRDWPADFPYKVRATQSFGERTPGATPLQRTTALALAMPWAVQYWQLH
GGDPKAAMALTQCANSNQGRHYQYDCGFTLSYNGKSNAQALSQYAFGDTKTPPDIVLATHEPASSVEMEQYRFTVERARY
ETLVNTRRSGQKLLDLDANWLNKYAEAMGLTDSMNASIAQGEAIRMQMAAQDAERRRRDLQGSWDNLYRRHLSGAITPED
ISSMEYIAATFEDEKLIWFSDNYGLTSDYALRRLCIVDTSTARCQNQTNRINKAAADAAALAAYVADHNAGVDAARRAGL
QSSLNTVEVRTYNSNGIYTGTTTMSQTQAEIIGARPQ

Sequences:

>Translated_677_residues
MLLLRVVLVSLLALLSLAAPALAEGPPYPGQVVHGFDYGSERVSRGDWKACQELCNGNGACRVWSIMSNEGKRDSVCYLK
HSEGKFEPWATIDSGLRTAPLVKAGGAPDQGHGFSENDITSVGVDRDDWKTCEAACNLNGACKAWSLYSPPNHEQSYCWI
KDAVGERKPLIYTDSGLKTQQTPIPDPGKQVKGKAFSGAVVIDRSLKAEDVQACKASCEGNRQCVAWTLFNPEKKSYPAR
CHGYAWAGEQVKFKRAVSAWREAPVLAEVAPPTGDEMLRWRSLEEVVAEFAPKITPRALTVAEKAEIAGLELAYLQGGSF
DYFRKLDALARTGDKAAMKAMINILLETGFGYNRDWPADFPYKVRATQSFGERTPGATPLQRTTALALAMPWAVQYWQLH
GGDPKAAMALTQCANSNQGRHYQYDCGFTLSYNGKSNAQALSQYAFGDTKTPPDIVLATHEPASSVEMEQYRFTVERARY
ETLVNTRRSGQKLLDLDANWLNKYAEAMGLTDSMNASIAQGEAIRMQMAAQDAERRRRDLQGSWDNLYRRHLSGAITPED
ISSMEYIAATFEDEKLIWFSDNYGLTSDYALRRLCIVDTSTARCQNQTNRINKAAADAAALAAYVADHNAGVDAARRAGL
QSSLNTVEVRTYNSNGIYTGTTTMSQTQAEIIGARPQ
>Mature_677_residues
MLLLRVVLVSLLALLSLAAPALAEGPPYPGQVVHGFDYGSERVSRGDWKACQELCNGNGACRVWSIMSNEGKRDSVCYLK
HSEGKFEPWATIDSGLRTAPLVKAGGAPDQGHGFSENDITSVGVDRDDWKTCEAACNLNGACKAWSLYSPPNHEQSYCWI
KDAVGERKPLIYTDSGLKTQQTPIPDPGKQVKGKAFSGAVVIDRSLKAEDVQACKASCEGNRQCVAWTLFNPEKKSYPAR
CHGYAWAGEQVKFKRAVSAWREAPVLAEVAPPTGDEMLRWRSLEEVVAEFAPKITPRALTVAEKAEIAGLELAYLQGGSF
DYFRKLDALARTGDKAAMKAMINILLETGFGYNRDWPADFPYKVRATQSFGERTPGATPLQRTTALALAMPWAVQYWQLH
GGDPKAAMALTQCANSNQGRHYQYDCGFTLSYNGKSNAQALSQYAFGDTKTPPDIVLATHEPASSVEMEQYRFTVERARY
ETLVNTRRSGQKLLDLDANWLNKYAEAMGLTDSMNASIAQGEAIRMQMAAQDAERRRRDLQGSWDNLYRRHLSGAITPED
ISSMEYIAATFEDEKLIWFSDNYGLTSDYALRRLCIVDTSTARCQNQTNRINKAAADAAALAAYVADHNAGVDAARRAGL
QSSLNTVEVRTYNSNGIYTGTTTMSQTQAEIIGARPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74488; Mature: 74488

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLRVVLVSLLALLSLAAPALAEGPPYPGQVVHGFDYGSERVSRGDWKACQELCNGNGA
CHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEECCCCHHHCCCCCHHHHHHHHCCCCC
CRVWSIMSNEGKRDSVCYLKHSEGKFEPWATIDSGLRTAPLVKAGGAPDQGHGFSENDIT
EEEEEEECCCCCCCCEEEEECCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCCCCCCCE
SVGVDRDDWKTCEAACNLNGACKAWSLYSPPNHEQSYCWIKDAVGERKPLIYTDSGLKTQ
ECCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEEEHHCCCCCCEEEECCCCCCC
QTPIPDPGKQVKGKAFSGAVVIDRSLKAEDVQACKASCEGNRQCVAWTLFNPEKKSYPAR
CCCCCCCCHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCC
CHGYAWAGEQVKFKRAVSAWREAPVLAEVAPPTGDEMLRWRSLEEVVAEFAPKITPRALT
CCCEEECCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHEE
VAEKAEIAGLELAYLQGGSFDYFRKLDALARTGDKAAMKAMINILLETGFGYNRDWPADF
HHHHHHHCCEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PYKVRATQSFGERTPGATPLQRTTALALAMPWAVQYWQLHGGDPKAAMALTQCANSNQGR
CEEEEECHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHCCCCCC
HYQYDCGFTLSYNGKSNAQALSQYAFGDTKTPPDIVLATHEPASSVEMEQYRFTVERARY
EEEEECCEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
ETLVNTRRSGQKLLDLDANWLNKYAEAMGLTDSMNASIAQGEAIRMQMAAQDAERRRRDL
HHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHC
QGSWDNLYRRHLSGAITPEDISSMEYIAATFEDEKLIWFSDNYGLTSDYALRRLCIVDTS
CCCHHHHHHHHHCCCCCHHHHHHHHHHEEEECCCEEEEEECCCCCCHHHHHHEEEEEECC
TARCQNQTNRINKAAADAAALAAYVADHNAGVDAARRAGLQSSLNTVEVRTYNSNGIYTG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHCCCEEEEEEECCCCEEEC
TTTMSQTQAEIIGARPQ
CCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MLLLRVVLVSLLALLSLAAPALAEGPPYPGQVVHGFDYGSERVSRGDWKACQELCNGNGA
CHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEECCCCHHHCCCCCHHHHHHHHCCCCC
CRVWSIMSNEGKRDSVCYLKHSEGKFEPWATIDSGLRTAPLVKAGGAPDQGHGFSENDIT
EEEEEEECCCCCCCCEEEEECCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCCCCCCCE
SVGVDRDDWKTCEAACNLNGACKAWSLYSPPNHEQSYCWIKDAVGERKPLIYTDSGLKTQ
ECCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEEEHHCCCCCCEEEECCCCCCC
QTPIPDPGKQVKGKAFSGAVVIDRSLKAEDVQACKASCEGNRQCVAWTLFNPEKKSYPAR
CCCCCCCCHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCC
CHGYAWAGEQVKFKRAVSAWREAPVLAEVAPPTGDEMLRWRSLEEVVAEFAPKITPRALT
CCCEEECCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHEE
VAEKAEIAGLELAYLQGGSFDYFRKLDALARTGDKAAMKAMINILLETGFGYNRDWPADF
HHHHHHHCCEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PYKVRATQSFGERTPGATPLQRTTALALAMPWAVQYWQLHGGDPKAAMALTQCANSNQGR
CEEEEECHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHCCCCCC
HYQYDCGFTLSYNGKSNAQALSQYAFGDTKTPPDIVLATHEPASSVEMEQYRFTVERARY
EEEEECCEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
ETLVNTRRSGQKLLDLDANWLNKYAEAMGLTDSMNASIAQGEAIRMQMAAQDAERRRRDL
HHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHC
QGSWDNLYRRHLSGAITPEDISSMEYIAATFEDEKLIWFSDNYGLTSDYALRRLCIVDTS
CCCHHHHHHHHHCCCCCHHHHHHHHHHEEEECCCEEEEEECCCCCCHHHHHHEEEEEECC
TARCQNQTNRINKAAADAAALAAYVADHNAGVDAARRAGLQSSLNTVEVRTYNSNGIYTG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHCCCEEEEEEECCCCEEEC
TTTMSQTQAEIIGARPQ
CCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA