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The map label for this gene is 114799283

Identifier: 114799283

GI number: 114799283

Start: 3501087

End: 3501623

Strand: Direct

Name: 114799283

Synonym: HNE_3352

Alternate gene names: NA

Gene position: 3501087-3501623 (Clockwise)

Preceding gene: 114797582

Following gene: 114799194

Centisome position: 94.5

GC content: 63.87

Gene sequence:

>537_bases
ATGATCAAGCGGCTTCTTCCTGCCCTTCTCCTGTGTGCCCTGGCGCCGCTGGCGCAGGCATTTCCCTCTGACGAGATGTT
CGAGAAGCTGAAATCAGCCGAAGGCGAAGTTGAAGCCGCCGATGTTGCCGACGACATCTGGGCAACCTGGCTCGAATCCG
GCTCGCCGACCGCAGACCTTGTCATGAGCCGCGCCGTGGAAGCCCTCGCCCAGGGCGAAACCGAGCTTGCCCGCGACCTG
CTCGACCGCGTGATCCTGATGCGTCCGGATTTTGCCGAAGCCTGGCACCGGCGCGCGGGCATCTTCCTGTCGGAAGAAAA
TTACCCCGAGGCGCTGCGAGACCTCAACCAGGCCCTTGAAGTGGAGCCCCGCCATTTCGGCGCCTGGCTCGGCCTGGGCT
ATATTCTCGAACAGCTGGGCGGCGAGGCAGAGGCCCTCGACAGCTACCGCGAAGCGCTCACCATTTATCCGCTGATGCCG
CAGGCCAAGGCGGCTGAAGCGCGCCTGACGCTGAAGGCTGAAGGCCAGGAGCTTTGA

Upstream 100 bases:

>100_bases
GGGCGAACTGATCCGGCAAGGGCTTCTCTGAGCGCGGTCTCTGGCAGTTCCCCTGAAGGCGGCCGTTGCCGAGAGCGCCG
CGCGCGTCATATTAGAAGGC

Downstream 100 bases:

>100_bases
AGCGCATGATCACCGTGTCCCTCGTGGCCCTTTCGGGCCTCGGCCTTGGCGCCTGCGTGTCCAGTATGGCCTACACGTCC
AAGGTGGAAGCTGCCTATCC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MIKRLLPALLLCALAPLAQAFPSDEMFEKLKSAEGEVEAADVADDIWATWLESGSPTADLVMSRAVEALAQGETELARDL
LDRVILMRPDFAEAWHRRAGIFLSEENYPEALRDLNQALEVEPRHFGAWLGLGYILEQLGGEAEALDSYREALTIYPLMP
QAKAAEARLTLKAEGQEL

Sequences:

>Translated_178_residues
MIKRLLPALLLCALAPLAQAFPSDEMFEKLKSAEGEVEAADVADDIWATWLESGSPTADLVMSRAVEALAQGETELARDL
LDRVILMRPDFAEAWHRRAGIFLSEENYPEALRDLNQALEVEPRHFGAWLGLGYILEQLGGEAEALDSYREALTIYPLMP
QAKAAEARLTLKAEGQEL
>Mature_178_residues
MIKRLLPALLLCALAPLAQAFPSDEMFEKLKSAEGEVEAADVADDIWATWLESGSPTADLVMSRAVEALAQGETELARDL
LDRVILMRPDFAEAWHRRAGIFLSEENYPEALRDLNQALEVEPRHFGAWLGLGYILEQLGGEAEALDSYREALTIYPLMP
QAKAAEARLTLKAEGQEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19709; Mature: 19709

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRLLPALLLCALAPLAQAFPSDEMFEKLKSAEGEVEAADVADDIWATWLESGSPTADL
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHH
VMSRAVEALAQGETELARDLLDRVILMRPDFAEAWHRRAGIFLSEENYPEALRDLNQALE
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEECCCCCHHHHHHHHHHHC
VEPRHFGAWLGLGYILEQLGGEAEALDSYREALTIYPLMPQAKAAEARLTLKAEGQEL
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEECCCCCC
>Mature Secondary Structure
MIKRLLPALLLCALAPLAQAFPSDEMFEKLKSAEGEVEAADVADDIWATWLESGSPTADL
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHH
VMSRAVEALAQGETELARDLLDRVILMRPDFAEAWHRRAGIFLSEENYPEALRDLNQALE
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEECCCCCHHHHHHHHHHHC
VEPRHFGAWLGLGYILEQLGGEAEALDSYREALTIYPLMPQAKAAEARLTLKAEGQEL
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA