| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799271
Identifier: 114799271
GI number: 114799271
Start: 2793659
End: 2794168
Strand: Reverse
Name: 114799271
Synonym: HNE_2634
Alternate gene names: NA
Gene position: 2794168-2793659 (Counterclockwise)
Preceding gene: 114799765
Following gene: 114798302
Centisome position: 75.42
GC content: 60.98
Gene sequence:
>510_bases ATGGGTTTCCAAGACCTACAAGCCTTCCTTGATCGTGGCGGTCCAGTTCTGATCGTCATCATGGCCGCAACATTCGTGAT GTGGGCCCTGATCCTGGAGCGGCTGTTCTACTTCCGCTTTGCCCACAAGCAGGTGGCAGCTGACGCGATTGCCCAGTGGA ATGCCCGCACGGACCGCAAGTCCGTGCCGGCTCACTGGATCCGCGACAAGCTCGTCTCCGAAGTGCGCGCCAAGGCAGAA GCGAACGTCCAGTTGACGAAAGCGATGGTGGCCCTTGCGCCATTGCTGGGCCTGCTGGGCACAGTTACGGGCATGGTGGC CGTGTTTGATATCATGGCCATCACCTCCGGTGCGGACGCCAAGGCCATGTCGGCCGGTGTGTCGCGCGCCACAATCCCGA CCATGGCGGGCATGGTTGCCTCTCTGTCAGGCATCCTGTTCACCTCGGGCATGGACCGTCGTGTAAACCGGTCCGTCCAG GCGGTCGAAGATGATATGGAGATCAGCTGA
Upstream 100 bases:
>100_bases TCGACGAGCAGGCCGCCGGTCTTGTTGCCGAGAAAATGGAAGCCATTCACGGGGGCCGGGCATAAGCCCGTCCCTCAGAG CGCTCGAGGAGTAACCCGGT
Downstream 100 bases:
>100_bases TGCGTGGACGTACATCGAGACAGGCCGAAGAGGCAAACGTCGACCTGACGCCCATGCTGGACGTCGTGTTCATCCTGCTC ATCTTCTTCATCGTGACGTC
Product: putative TonB system transport protein ExbB
Products: NA
Alternate protein names: MotA/lQ/ExbB Proton Channel; NB System Biopolymer Transport Component; Transporter MotA/lQ/ExbB Proton Channel Family; Biopolymer Transport ExbB Protein; LQ Protein; Outer Membrane Transport Energization Protein ExbB; Biopolymer Transport; NB System Transport Protein ExbB
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MGFQDLQAFLDRGGPVLIVIMAATFVMWALILERLFYFRFAHKQVAADAIAQWNARTDRKSVPAHWIRDKLVSEVRAKAE ANVQLTKAMVALAPLLGLLGTVTGMVAVFDIMAITSGADAKAMSAGVSRATIPTMAGMVASLSGILFTSGMDRRVNRSVQ AVEDDMEIS
Sequences:
>Translated_169_residues MGFQDLQAFLDRGGPVLIVIMAATFVMWALILERLFYFRFAHKQVAADAIAQWNARTDRKSVPAHWIRDKLVSEVRAKAE ANVQLTKAMVALAPLLGLLGTVTGMVAVFDIMAITSGADAKAMSAGVSRATIPTMAGMVASLSGILFTSGMDRRVNRSVQ AVEDDMEIS >Mature_168_residues GFQDLQAFLDRGGPVLIVIMAATFVMWALILERLFYFRFAHKQVAADAIAQWNARTDRKSVPAHWIRDKLVSEVRAKAEA NVQLTKAMVALAPLLGLLGTVTGMVAVFDIMAITSGADAKAMSAGVSRATIPTMAGMVASLSGILFTSGMDRRVNRSVQA VEDDMEIS
Specific function: Unknown
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18260; Mature: 18128
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFQDLQAFLDRGGPVLIVIMAATFVMWALILERLFYFRFAHKQVAADAIAQWNARTDRK CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SVPAHWIRDKLVSEVRAKAEANVQLTKAMVALAPLLGLLGTVTGMVAVFDIMAITSGADA CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH KAMSAGVSRATIPTMAGMVASLSGILFTSGMDRRVNRSVQAVEDDMEIS HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure GFQDLQAFLDRGGPVLIVIMAATFVMWALILERLFYFRFAHKQVAADAIAQWNARTDRK CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SVPAHWIRDKLVSEVRAKAEANVQLTKAMVALAPLLGLLGTVTGMVAVFDIMAITSGADA CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH KAMSAGVSRATIPTMAGMVASLSGILFTSGMDRRVNRSVQAVEDDMEIS HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA