| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799239
Identifier: 114799239
GI number: 114799239
Start: 3044119
End: 3044868
Strand: Reverse
Name: 114799239
Synonym: HNE_2886
Alternate gene names: NA
Gene position: 3044868-3044119 (Counterclockwise)
Preceding gene: 114798423
Following gene: 114799905
Centisome position: 82.18
GC content: 61.07
Gene sequence:
>750_bases ATGCCCCATCCCATTCGTGTCGGTATTGGTGGCTGGAATTATGAGCCGTGGCGGGAGACCTTTTATCCCGCCGAAGTGAA GAAAGCGGGCGAGCTTGCCTATGCCAGCGGGCAGGTGACGGCGATCGAGATCAACTCGACCTTCTATCGCGGCCAAAGCG AGGCGACTTTTGCAAAGTGGGCGGAAGAAACGCCGGATGGCTTCCGCTTCACCGTGAAAGCGCACCGGGCGACGACGATC CGCAAGACCGCAGACGATATGCGCAGCTCGGTCGGCATGTTTATTGAGGGCGGCGTTACGGCGCTGGGCGAGAAGCTGGG CGCGATCAACTGGCAGTTTCCCGAGACGCGCAAGTTTGATGCCGATTATTTCGGCGCGTTCTGCTCCTTCCTGCCGCCCG AGCACAAAGGCGTGCGCCTTCGCCACGCGATCGAAGTGCGCAATGAGACGTTCCGGAATGAGTCGTTTACGGATCTTATG CGCCGGCATGGCTGCGCCGTGGTGTTCGCCGATGATCCCGACTGGCCGATGCCGGATGTGGAGACGGCGGATTTTGCCTA TGCGCGGTTGCAGCAGTCGCAAAGTGATGTTGAGACAGGGTACGAGGCGGGCGCGTTGGATGCCTGGGCCAAGACCTTCA AGGGTTGGGCGAAGAATCGCGAGGTGTTCGCCTTCTTCATTGCGGGCGCCAAGGAACGCAATCCGGCCGCCGCAAAGGCG CTGATTGAGCGAGTCGGGCGGCTCGGATAG
Upstream 100 bases:
>100_bases GCAGCAGGCGAGTGCCAATAAAACTGGCAAGAATCGGGTCGCGCATTTCCGGAAACTACATTAGTTTTGTTTTCTCTTTA TCTTTACGAAGAGGACCTTC
Downstream 100 bases:
>100_bases AGCCGCCCTTTCCCGGTTTTCTAGCCTGCCGCGTTCAGGGCCTGGTCGAGGTCTGCGATCAGGTCTTCTGTGCCTTCGAT GCCGATGGAGAGGCGCACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MPHPIRVGIGGWNYEPWRETFYPAEVKKAGELAYASGQVTAIEINSTFYRGQSEATFAKWAEETPDGFRFTVKAHRATTI RKTADDMRSSVGMFIEGGVTALGEKLGAINWQFPETRKFDADYFGAFCSFLPPEHKGVRLRHAIEVRNETFRNESFTDLM RRHGCAVVFADDPDWPMPDVETADFAYARLQQSQSDVETGYEAGALDAWAKTFKGWAKNREVFAFFIAGAKERNPAAAKA LIERVGRLG
Sequences:
>Translated_249_residues MPHPIRVGIGGWNYEPWRETFYPAEVKKAGELAYASGQVTAIEINSTFYRGQSEATFAKWAEETPDGFRFTVKAHRATTI RKTADDMRSSVGMFIEGGVTALGEKLGAINWQFPETRKFDADYFGAFCSFLPPEHKGVRLRHAIEVRNETFRNESFTDLM RRHGCAVVFADDPDWPMPDVETADFAYARLQQSQSDVETGYEAGALDAWAKTFKGWAKNREVFAFFIAGAKERNPAAAKA LIERVGRLG >Mature_248_residues PHPIRVGIGGWNYEPWRETFYPAEVKKAGELAYASGQVTAIEINSTFYRGQSEATFAKWAEETPDGFRFTVKAHRATTIR KTADDMRSSVGMFIEGGVTALGEKLGAINWQFPETRKFDADYFGAFCSFLPPEHKGVRLRHAIEVRNETFRNESFTDLMR RHGCAVVFADDPDWPMPDVETADFAYARLQQSQSDVETGYEAGALDAWAKTFKGWAKNREVFAFFIAGAKERNPAAAKAL IERVGRLG
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27979; Mature: 27847
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHPIRVGIGGWNYEPWRETFYPAEVKKAGELAYASGQVTAIEINSTFYRGQSEATFAKW CCCCEEEECCCCCCCCHHHHCCCHHHHHCCCEEEECCCEEEEEECCEEECCCCCHHHHHH AEETPDGFRFTVKAHRATTIRKTADDMRSSVGMFIEGGVTALGEKLGAINWQFPETRKFD HHCCCCCEEEEEEECCHHHHHHHHHHHHHHCCEEEECCHHHHHHHHCCCCCCCCCCCCCC ADYFGAFCSFLPPEHKGVRLRHAIEVRNETFRNESFTDLMRRHGCAVVFADDPDWPMPDV HHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCCCCCC ETADFAYARLQQSQSDVETGYEAGALDAWAKTFKGWAKNREVFAFFIAGAKERNPAAAKA CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHH LIERVGRLG HHHHHHCCC >Mature Secondary Structure PHPIRVGIGGWNYEPWRETFYPAEVKKAGELAYASGQVTAIEINSTFYRGQSEATFAKW CCCEEEECCCCCCCCHHHHCCCHHHHHCCCEEEECCCEEEEEECCEEECCCCCHHHHHH AEETPDGFRFTVKAHRATTIRKTADDMRSSVGMFIEGGVTALGEKLGAINWQFPETRKFD HHCCCCCEEEEEEECCHHHHHHHHHHHHHHCCEEEECCHHHHHHHHCCCCCCCCCCCCCC ADYFGAFCSFLPPEHKGVRLRHAIEVRNETFRNESFTDLMRRHGCAVVFADDPDWPMPDV HHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCCCCCC ETADFAYARLQQSQSDVETGYEAGALDAWAKTFKGWAKNREVFAFFIAGAKERNPAAAKA CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHH LIERVGRLG HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA