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The map label for this gene is 114799234

Identifier: 114799234

GI number: 114799234

Start: 2960739

End: 2961332

Strand: Reverse

Name: 114799234

Synonym: HNE_2798

Alternate gene names: NA

Gene position: 2961332-2960739 (Counterclockwise)

Preceding gene: 114797634

Following gene: 114799696

Centisome position: 79.93

GC content: 50.51

Gene sequence:

>594_bases
ATGAGTTCTCGAAGAGATCGAACGCTTTTGATTCTTGATCTTGATGAAACGCTCGTCCACGCAAGTTCAACACCGCTGGA
CCGCGCAGCAGATTTCAGGGTTGCTCATTACCACGTCTATCGGCGGCCGCACCTTGATGATTTTCTGACTGCGGTGTCGG
CGACGTACGATCTCGCAGTTTGGTCATCGGCAAGCGACGATTACGTTAAAGCAGTTGTGGCAAACATTTTTCCCAACTTG
GACGCGCTTCAGTTCGTATGGGGACGAAGCCGTGCCACGTATCGTCACATAGCTTGCACAGATGACTACGTCGCGAACGC
CTATGACCCCGAGCATTTTTTCTACATCAAAGATCTTTCAAAAGTTAGGCGTAGAGGATGGCCTCTCGAAAGAGTGCTGA
TCGTAGATGATACGCCGGAGAAATGTATCCGGAACTATGGAAACGCCATTTATCCGGCACCTTACGAGGGAAGCCTCCAG
GACGAAGAATTACCTCACCTGGCGAGTTATTTGGAAACGCTTCGTGATGTCCACAACGTTCGGAAGGTCGAGAAACGACG
CTGGCGCACGTTGATCCCAAAGTCAGAGAAATGA

Upstream 100 bases:

>100_bases
GATTGGCGTCGCAACGGGCCGCAAGGCGCATGACAAGCGCGAGCATGAGGCCAAGCGCGACTGGGCGCGGGATAAAGCGC
GGATCATGAAGGCAGGGTAG

Downstream 100 bases:

>100_bases
GTTTTTAGCATGCCGCCCCTACCTCAAGCATTACCTATGTAAATCAGTCTGCATTTTTTAATGCTGCTACCCCACCCTAA
AACGCATATGCGGGAGCTGG

Product: phosphoprotein phosphatase

Products: NA

Alternate protein names: NLI Interacting Domain Protein; CTD Phosphatase

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MSSRRDRTLLILDLDETLVHASSTPLDRAADFRVAHYHVYRRPHLDDFLTAVSATYDLAVWSSASDDYVKAVVANIFPNL
DALQFVWGRSRATYRHIACTDDYVANAYDPEHFFYIKDLSKVRRRGWPLERVLIVDDTPEKCIRNYGNAIYPAPYEGSLQ
DEELPHLASYLETLRDVHNVRKVEKRRWRTLIPKSEK

Sequences:

>Translated_197_residues
MSSRRDRTLLILDLDETLVHASSTPLDRAADFRVAHYHVYRRPHLDDFLTAVSATYDLAVWSSASDDYVKAVVANIFPNL
DALQFVWGRSRATYRHIACTDDYVANAYDPEHFFYIKDLSKVRRRGWPLERVLIVDDTPEKCIRNYGNAIYPAPYEGSLQ
DEELPHLASYLETLRDVHNVRKVEKRRWRTLIPKSEK
>Mature_196_residues
SSRRDRTLLILDLDETLVHASSTPLDRAADFRVAHYHVYRRPHLDDFLTAVSATYDLAVWSSASDDYVKAVVANIFPNLD
ALQFVWGRSRATYRHIACTDDYVANAYDPEHFFYIKDLSKVRRRGWPLERVLIVDDTPEKCIRNYGNAIYPAPYEGSLQD
EELPHLASYLETLRDVHNVRKVEKRRWRTLIPKSEK

Specific function: Unknown

COG id: COG5190

COG function: function code K; TFIIF-interacting CTD phosphatases, including NLI-interacting factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI10864009, Length=188, Percent_Identity=29.7872340425532, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI32813443, Length=188, Percent_Identity=29.7872340425532, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI20129109, Length=200, Percent_Identity=32.5, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22983; Mature: 22852

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: PS50969 FCP1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRRDRTLLILDLDETLVHASSTPLDRAADFRVAHYHVYRRPHLDDFLTAVSATYDLAV
CCCCCCCEEEEEECCHHHHHCCCCCCCHHHCCEEEEEEEECCCCHHHHHHHHHHHHHEEE
WSSASDDYVKAVVANIFPNLDALQFVWGRSRATYRHIACTDDYVANAYDPEHFFYIKDLS
ECCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEECCCCHHCCCCCCCCEEEHHHHH
KVRRRGWPLERVLIVDDTPEKCIRNYGNAIYPAPYEGSLQDEELPHLASYLETLRDVHNV
HHHHCCCCEEEEEEEECCHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RKVEKRRWRTLIPKSEK
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SSRRDRTLLILDLDETLVHASSTPLDRAADFRVAHYHVYRRPHLDDFLTAVSATYDLAV
CCCCCCEEEEEECCHHHHHCCCCCCCHHHCCEEEEEEEECCCCHHHHHHHHHHHHHEEE
WSSASDDYVKAVVANIFPNLDALQFVWGRSRATYRHIACTDDYVANAYDPEHFFYIKDLS
ECCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEECCCCHHCCCCCCCCEEEHHHHH
KVRRRGWPLERVLIVDDTPEKCIRNYGNAIYPAPYEGSLQDEELPHLASYLETLRDVHNV
HHHHCCCCEEEEEEEECCHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RKVEKRRWRTLIPKSEK
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA