| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is cysD
Identifier: 114799213
GI number: 114799213
Start: 788541
End: 789527
Strand: Reverse
Name: cysD
Synonym: HNE_0777
Alternate gene names: 114799213
Gene position: 789527-788541 (Counterclockwise)
Preceding gene: 114797227
Following gene: 114799988
Centisome position: 21.31
GC content: 62.51
Gene sequence:
>987_bases ATGCGGACCCGACACGGAGCCTTTCTTCTGCTGGCAAGGCCCGCTACGGAACGCGCTCACACGCCAGAACAGGATCAGTA CACCTTGCCCACCCTGACCCATCTTGACCGGCTGGAAGCCGAAAGCCTGCACATCCTCCGGGAAGTCGCGGCCGAATGCG AAAAGCCGGTGATGCTGTATTCGATCGGCAAGGATTCGGCCGTGATGCTGCATCTGGCGATGAAGGCATTCTATCCGGCC AGGCCGCCCTTCCCGCTGCTGCATGTCGATACCGGCTGGAAGTTCCGGGAGATGATCGCGTTCCGCGACCGCAAGGTTAA AGAGCTGGGCCTGGAACTGCTCGTCCATATGAATGAGGACGGCGTGCGCGAAGGCGTTGGCCCCTTCACGCATGGCTCGG CCTACCATACAGATGTGATGAAAACCGCCGCGCTGAAACAGGCGCTCGACAAGTACGGCTTTGACGCCGCCTTTGGCGGC GCCCGGCGCGACGAAGAGAAGTCCCGCGCCAAGGAGCGCGTCATCTCCTTCCGCTCGGCCGGCCACCGCTGGGACCCCAA ACGCCAGCGCCCGGAAATCTGGAACCTCTACAACACCCGGATGCACAAGGGCGAAAGCCTGCGCGCCTTCCCGCTGTCCA ACTGGACCGAGCTCGACATCTGGCAGTACATTCGCCGCGAAGGCATCGAGCTCGTCCCGCTCTATCTGGCCGCGCCGCGC CCCGTGGTCACCTGGAACGACACGCTGATCATGGTCGATGACGACCGCGTGCCCGCCGAGATCGCCGCGAAAGCGGAAGT TAAATCCGTCCGTTTCCGGACGCTTGGCTGCTACCCGCTGACCGGCGCGGTGGAAAGCACCGCCACGACACTGGATGATG TTATCCAGGAAATTCTCCTCACCACCACGTCCGAGCGCCAGGGCCGCGCCATCGACAAGGATCAGACCGCCTCCATGGAG AAGAAGAAGCAGGAAGGCTATTTCTGA
Upstream 100 bases:
>100_bases CAGGCTGCACAATGACGATTTATGTGCATTTGTGACACCAATTGCGGCGGATTCAGGTCTGGCGTCGGCTCGGCTTTCGT TTAGCTTTACTGAAGGGTGA
Downstream 100 bases:
>100_bases TGCGCCTCAACGACGATCTCATTGCTTCGGATATCGGCGCGTATCTGGAGGCGCACGAGAACAAATCGCTCCTGCGGTTC ATCACCTGCGGCTCAGTCGA
Product: sulfate adenylyltransferase subunit 2
Products: NA
Alternate protein names: ATP-sulfurylase small subunit; Sulfate adenylate transferase; SAT
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MRTRHGAFLLLARPATERAHTPEQDQYTLPTLTHLDRLEAESLHILREVAAECEKPVMLYSIGKDSAVMLHLAMKAFYPA RPPFPLLHVDTGWKFREMIAFRDRKVKELGLELLVHMNEDGVREGVGPFTHGSAYHTDVMKTAALKQALDKYGFDAAFGG ARRDEEKSRAKERVISFRSAGHRWDPKRQRPEIWNLYNTRMHKGESLRAFPLSNWTELDIWQYIRREGIELVPLYLAAPR PVVTWNDTLIMVDDDRVPAEIAAKAEVKSVRFRTLGCYPLTGAVESTATTLDDVIQEILLTTTSERQGRAIDKDQTASME KKKQEGYF
Sequences:
>Translated_328_residues MRTRHGAFLLLARPATERAHTPEQDQYTLPTLTHLDRLEAESLHILREVAAECEKPVMLYSIGKDSAVMLHLAMKAFYPA RPPFPLLHVDTGWKFREMIAFRDRKVKELGLELLVHMNEDGVREGVGPFTHGSAYHTDVMKTAALKQALDKYGFDAAFGG ARRDEEKSRAKERVISFRSAGHRWDPKRQRPEIWNLYNTRMHKGESLRAFPLSNWTELDIWQYIRREGIELVPLYLAAPR PVVTWNDTLIMVDDDRVPAEIAAKAEVKSVRFRTLGCYPLTGAVESTATTLDDVIQEILLTTTSERQGRAIDKDQTASME KKKQEGYF >Mature_328_residues MRTRHGAFLLLARPATERAHTPEQDQYTLPTLTHLDRLEAESLHILREVAAECEKPVMLYSIGKDSAVMLHLAMKAFYPA RPPFPLLHVDTGWKFREMIAFRDRKVKELGLELLVHMNEDGVREGVGPFTHGSAYHTDVMKTAALKQALDKYGFDAAFGG ARRDEEKSRAKERVISFRSAGHRWDPKRQRPEIWNLYNTRMHKGESLRAFPLSNWTELDIWQYIRREGIELVPLYLAAPR PVVTWNDTLIMVDDDRVPAEIAAKAEVKSVRFRTLGCYPLTGAVESTATTLDDVIQEILLTTTSERQGRAIDKDQTASME KKKQEGYF
Specific function: First step in the sulfate activation pathway. This reaction occurs early in the reductive branch of the cysteine biosynthetic pathway. [C]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysD subfamily
Homologues:
Organism=Escherichia coli, GI1789109, Length=300, Percent_Identity=69, Blast_Score=431, Evalue=1e-122,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CYSD_HYPNA (Q0C438)
Other databases:
- EMBL: CP000158 - RefSeq: YP_759505.1 - ProteinModelPortal: Q0C438 - SMR: Q0C438 - STRING: Q0C438 - GeneID: 4289582 - GenomeReviews: CP000158_GR - KEGG: hne:HNE_0777 - NMPDR: fig|228405.5.peg.760 - TIGR: HNE_0777 - eggNOG: COG0175 - HOGENOM: HBG758022 - OMA: WQYIRRE - PhylomeDB: Q0C438 - ProtClustDB: PRK05253 - BioCyc: HNEP81032:HNE_0777-MONOMER - HAMAP: MF_00064 - InterPro: IPR002500 - InterPro: IPR014729 - InterPro: IPR011784 - Gene3D: G3DSA:3.40.50.620 - PIRSF: PIRSF002936 - TIGRFAMs: TIGR02039
Pfam domain/function: PF01507 PAPS_reduct
EC number: =2.7.7.4
Molecular weight: Translated: 37535; Mature: 37535
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTRHGAFLLLARPATERAHTPEQDQYTLPTLTHLDRLEAESLHILREVAAECEKPVMLY CCCCCCEEEEEECCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE SIGKDSAVMLHLAMKAFYPARPPFPLLHVDTGWKFREMIAFRDRKVKELGLELLVHMNED ECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHEEECCCC GVREGVGPFTHGSAYHTDVMKTAALKQALDKYGFDAAFGGARRDEEKSRAKERVISFRSA CHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHC GHRWDPKRQRPEIWNLYNTRMHKGESLRAFPLSNWTELDIWQYIRREGIELVPLYLAAPR CCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCEEEEEEEECCC PVVTWNDTLIMVDDDRVPAEIAAKAEVKSVRFRTLGCYPLTGAVESTATTLDDVIQEILL CEEEECCEEEEEECCCCCHHHHHHHHHHHHHEEEECCEECCCCHHHHHHHHHHHHHHHHH TTTSERQGRAIDKDQTASMEKKKQEGYF HCCCCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MRTRHGAFLLLARPATERAHTPEQDQYTLPTLTHLDRLEAESLHILREVAAECEKPVMLY CCCCCCEEEEEECCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE SIGKDSAVMLHLAMKAFYPARPPFPLLHVDTGWKFREMIAFRDRKVKELGLELLVHMNED ECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHEEECCCC GVREGVGPFTHGSAYHTDVMKTAALKQALDKYGFDAAFGGARRDEEKSRAKERVISFRSA CHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHC GHRWDPKRQRPEIWNLYNTRMHKGESLRAFPLSNWTELDIWQYIRREGIELVPLYLAAPR CCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCEEEEEEEECCC PVVTWNDTLIMVDDDRVPAEIAAKAEVKSVRFRTLGCYPLTGAVESTATTLDDVIQEILL CEEEECCEEEEEECCCCCHHHHHHHHHHHHHEEEECCEECCCCHHHHHHHHHHHHHHHHH TTTSERQGRAIDKDQTASMEKKKQEGYF HCCCCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA