| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114799211
Identifier: 114799211
GI number: 114799211
Start: 376116
End: 376847
Strand: Reverse
Name: 114799211
Synonym: HNE_0384
Alternate gene names: NA
Gene position: 376847-376116 (Counterclockwise)
Preceding gene: 114798667
Following gene: 114800032
Centisome position: 10.17
GC content: 63.39
Gene sequence:
>732_bases GTGACTTTCGGGCACGCGCAGATCATCAAGGTCCTGAAATGGGCAGGGCTGACTTTGGCGGCGCTGCTGATCCTGTGCTT CTGGTATCTCGGCGCTGCCTGGCTTTCGGAGAAACTGGCGTCTGGCGGGCGCCCGCAACTCGCAGACGCCGCCACGCCCG CCACCTACCTCTGCCAGGCGCCCTTCCATACCGACATTGCGATCCCCCTTTATGATCCGCTGTTCGACTGGTCGGAGGAG CTGAAAGACGAGTTGCCCGCCTGGTTGCCGCCAAACACCTATGTCCTGTTTGGCTGGGGCGACTCGGTCTTTTTCACCCG CGTGCTCCAGCCTGAGGACATGACAGCCGGCCGCGTGCTCAGCGCGCTGGCCGGCATGAACGACACCGCCGTGCGGATCG TGCCGGTCGATGGCGGGTCGGTAGACGAGTTCTGCGAGCCGATCCCGGTCGATAATGAAGGGCGCGGCGCCATAATCGAC CATATCCGCGACACCTTCGAACGCGACAGCGACGGCCAGTTCAGCGTTATCCCCACACCGGTACCGGGCGAAATCCTCGT CCATGCGACGGGGCGCTACAGCATGTTCAACACCTGCAATCAGTGGACCGCTGCGGCGCTGGGCAAGGCGGGCCTCCCCC GCTCCCTCTTCGCGCCCTTTGCATGGAACGTTACGTCACCCTTGCGAAAGGCCGAGGAGACGCGTACCGAGGAGGTAACA CTAGTCGAATAG
Upstream 100 bases:
>100_bases ACAACTGGATTCAATTCCGAATCATGGGCTTGCGCAGAAACACGGCTTGGCCCCATCCTCTGCCTCAAGGCCCCGAGGGG AGACGCAATCAGGAGGCGGG
Downstream 100 bases:
>100_bases AATAATGTGGGAGGAGAGAATATGATTGGTCCCAATGGCCGCCCGTGTCCGGAATGGTTTGCAAAGCCTCAGCTCGGCAT CTTCATTCACTGGGGCATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTFGHAQIIKVLKWAGLTLAALLILCFWYLGAAWLSEKLASGGRPQLADAATPATYLCQAPFHTDIAIPLYDPLFDWSEE LKDELPAWLPPNTYVLFGWGDSVFFTRVLQPEDMTAGRVLSALAGMNDTAVRIVPVDGGSVDEFCEPIPVDNEGRGAIID HIRDTFERDSDGQFSVIPTPVPGEILVHATGRYSMFNTCNQWTAAALGKAGLPRSLFAPFAWNVTSPLRKAEETRTEEVT LVE
Sequences:
>Translated_243_residues MTFGHAQIIKVLKWAGLTLAALLILCFWYLGAAWLSEKLASGGRPQLADAATPATYLCQAPFHTDIAIPLYDPLFDWSEE LKDELPAWLPPNTYVLFGWGDSVFFTRVLQPEDMTAGRVLSALAGMNDTAVRIVPVDGGSVDEFCEPIPVDNEGRGAIID HIRDTFERDSDGQFSVIPTPVPGEILVHATGRYSMFNTCNQWTAAALGKAGLPRSLFAPFAWNVTSPLRKAEETRTEEVT LVE >Mature_242_residues TFGHAQIIKVLKWAGLTLAALLILCFWYLGAAWLSEKLASGGRPQLADAATPATYLCQAPFHTDIAIPLYDPLFDWSEEL KDELPAWLPPNTYVLFGWGDSVFFTRVLQPEDMTAGRVLSALAGMNDTAVRIVPVDGGSVDEFCEPIPVDNEGRGAIIDH IRDTFERDSDGQFSVIPTPVPGEILVHATGRYSMFNTCNQWTAAALGKAGLPRSLFAPFAWNVTSPLRKAEETRTEEVTL VE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26685; Mature: 26553
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFGHAQIIKVLKWAGLTLAALLILCFWYLGAAWLSEKLASGGRPQLADAATPATYLCQA CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEECC PFHTDIAIPLYDPLFDWSEELKDELPAWLPPNTYVLFGWGDSVFFTRVLQPEDMTAGRVL CCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCCCCCHHHHHH SALAGMNDTAVRIVPVDGGSVDEFCEPIPVDNEGRGAIIDHIRDTFERDSDGQFSVIPTP HHHHCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCC VPGEILVHATGRYSMFNTCNQWTAAALGKAGLPRSLFAPFAWNVTSPLRKAEETRTEEVT CCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCEE LVE EEC >Mature Secondary Structure TFGHAQIIKVLKWAGLTLAALLILCFWYLGAAWLSEKLASGGRPQLADAATPATYLCQA CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEECC PFHTDIAIPLYDPLFDWSEELKDELPAWLPPNTYVLFGWGDSVFFTRVLQPEDMTAGRVL CCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCCCCCHHHHHH SALAGMNDTAVRIVPVDGGSVDEFCEPIPVDNEGRGAIIDHIRDTFERDSDGQFSVIPTP HHHHCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCC VPGEILVHATGRYSMFNTCNQWTAAALGKAGLPRSLFAPFAWNVTSPLRKAEETRTEEVT CCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCEE LVE EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA