| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is dnaA [C]
Identifier: 114799179
GI number: 114799179
Start: 751990
End: 752334
Strand: Direct
Name: dnaA [C]
Synonym: HNE_0741
Alternate gene names: 114799179
Gene position: 751990-752334 (Clockwise)
Preceding gene: 114797666
Following gene: 114800191
Centisome position: 20.3
GC content: 60.87
Gene sequence:
>345_bases ATGGCGGAGTTCAATCCCCAGAGAGATGAAGACAGGGCCTACCTGGCAGGCGCCCTGGTGGCGTATGCGCTTGGCCTGAA ATCAGAGGCAGTTCTGTCCGTTGAGCGTGGAAACCCGGTGCACGCCCGTGCCCGGCATATCGCGATGTATCTGACACATA CCGGCTGTGGGATGAGCCTTTCTCGCGTCGCCCGTGCTTTCGGCCGAGACCGGTCGACCGTTTCTCATGCCTGCCGCATC ATCGAAGACTATCGGGAAGATCCTGACTTCGACACATGGCTCGAACAGCTCTCCAGCGGCTTGCGGTCCGTCGCGTTATT GGGCGTTGCGGAGGCCACGGCATGA
Upstream 100 bases:
>100_bases CCCCAACGTTTTCAGGCCAGTTGCTTGCTGAAATAGGAAAGTTATCCTACACCTCTCCATCTCGGGTATGGTTTCGCCAT AACCCGAAGAGGAGTGGTGA
Downstream 100 bases:
>100_bases GCGGGGCAAATCTGCGGCCGCTCAGTGAGGCGCAGGTTCTCCGTGTGCTGGCATCAGGCGGCATGTTGGTCGCCGCGGGC AGTCACTGGCGCGCCTATCG
Product: DnaA domain-containing protein
Products: NA
Alternate protein names: ATPase Involved In DNA Replication Initiation; ATPase; Chromosomal Replication Initiator DNAA Domain; DNAA Domain-Containing Protein
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MAEFNPQRDEDRAYLAGALVAYALGLKSEAVLSVERGNPVHARARHIAMYLTHTGCGMSLSRVARAFGRDRSTVSHACRI IEDYREDPDFDTWLEQLSSGLRSVALLGVAEATA
Sequences:
>Translated_114_residues MAEFNPQRDEDRAYLAGALVAYALGLKSEAVLSVERGNPVHARARHIAMYLTHTGCGMSLSRVARAFGRDRSTVSHACRI IEDYREDPDFDTWLEQLSSGLRSVALLGVAEATA >Mature_113_residues AEFNPQRDEDRAYLAGALVAYALGLKSEAVLSVERGNPVHARARHIAMYLTHTGCGMSLSRVARAFGRDRSTVSHACRII EDYREDPDFDTWLEQLSSGLRSVALLGVAEATA
Specific function: Plays An Important Role In The Initiation And Regulation Of Chromosomal Replication. Binds To The Origin Of Replication; It Binds Specifically Double-Stranded DNA At A 9 Bp Consensus (Dnaa Box): 5'-TTATC[Ca]A[Ca]A-3'. Dnaa Binds To ATP And To Acidic Phosp
COG id: COG0593
COG function: function code L; ATPase involved in DNA replication initiation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12508; Mature: 12377
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEFNPQRDEDRAYLAGALVAYALGLKSEAVLSVERGNPVHARARHIAMYLTHTGCGMSL CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCH SRVARAFGRDRSTVSHACRIIEDYREDPDFDTWLEQLSSGLRSVALLGVAEATA HHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AEFNPQRDEDRAYLAGALVAYALGLKSEAVLSVERGNPVHARARHIAMYLTHTGCGMSL CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCH SRVARAFGRDRSTVSHACRIIEDYREDPDFDTWLEQLSSGLRSVALLGVAEATA HHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA