| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is ilvB [H]
Identifier: 114799168
GI number: 114799168
Start: 445126
End: 446862
Strand: Reverse
Name: ilvB [H]
Synonym: HNE_0451
Alternate gene names: 114799168
Gene position: 446862-445126 (Counterclockwise)
Preceding gene: 114798380
Following gene: 114799718
Centisome position: 12.06
GC content: 61.89
Gene sequence:
>1737_bases ATGATGACCGGCGCGCAGATCGTCGTAGAGGCCCTCCGGGAGCAAGGCGTATCGGTGATGTTCGGGTATCCGGGCGGCGC GGTGCTACCGATTTATGATGCGCTCTACGGGCAGGACGCGATCCGCCATATTCTGGTGCGCCATGAACAGGGCGCCGGGC ACGCGGCTGAAGGCTATGCGCGCTCGACGGGGAAATGCGGCGTGGCGCTGGTCACCTCCGGCCCCGGCGCGACCAATATG GTGACCCCGATCACCGACGCGATGATGGATTCGATCCCGATGGTCGTCCTCACCGGACAGGTGCCAACGCATCTGATCGG GACAGACGCCTTTCAGGAGTGCGATACGACCGGCATCACGCGCACCTGCGCCAAGCACAATTACCTCGTTACGGATGTGA ACCAGCTGGCGCGCACGATCCATGAGGCGTTCTATATCGCCACCAATGGCCGCCCCGGCCCGGTCGTGATCGACATTCCC AAGGACATCCAGTTTGCCACCGGGCCTTATGTGGGCAAGGCCGGCATCCTGAAGCCGACCTATGTGCCCCAGACTGAGCC GGCGCCCGAGGCAATCAAGGCTGTCGTCGACCTGATGACCAAGGCGTGGCGGCCGATCTTCTATACCGGCGGCGGCGTGA TCAATTCCGGGCCGCGCGCGTCCAAGCTGCTGCGCGAGTTGCAGGAGATGACGGGCATTCCGGTGACCTCAACGTTGATG GGGCTGGGCGCCTTCCCCGCCAATCATGCTGACTGGCTGGGCATGGTGGGCATGCATGGCAGCTTTGAAGCCAACAACGC CATGCATGACTGTGACCTGATGATCTGTGTCGGCGCGCGGTTTGATGACCGGGTGACGGGCCGTGTGGACGCGTTCTCGC CCAATTCGAAGAAGGTGCACATCGACATTGATGCCTCCTCAATCAACAAGATTGTGCGGGTGGATATTCCGGTTCTGGCC GATTGCGCGCAGGCGCTGGAAGCCATCCTCAAGGAGCTGAAAGCCCGCAAGGCGCAGCTGCCGGATCTGGCGCCCTGGAA AGAAGAGATCGGCGCCTGGCGCGCGCGGCGCTGCTTTGCCTACAAGGGCTCCAGTGACGTGATCAAACCGCAATATGCGG TCGAGCGCCTCTATGCCCTGACCAAGGATCATGACGCCTACATCACGACCGAAGTGGGCCAGCACCAGATGTGGGCGGCC CAGTTCTATCATTTCAACGAGCCCAACCGCTGGATGACTTCCGGTGGCCTGGGCACGATGGGCTATGGCCTGCCCGCCGC CGTGGGCGTTCAGGCCGCCCACCCCGACGCGCTGGTGATCGACATTGCCGGGGAAGCCTCCATCCAGATGATGATGCAGG AACTTTCCACGGCGGTTCAGCACAAGCTGCCGGTGAAGGTGTTCATTCTCAATAATGAATGGATGGGCATGGTGCGCCAG TGGCAGGAATTGCTGCATGGCGAGCGCTATTCCCACTCCTATTCGGAAAGCCTGCCGGATTTCGTCAAACTGGCTGACGC GCTGGGCGCTTATGGCATCCGCTGTGATGACCCGGCCGAGCTTGACGGGAAGATCCTGGAGATGGTGAACCATCCTGGCC CGGTCCTGTTCGATTGCCGTGTGGAGCGCGCCGAAAACTGCCTGCCGATGATTCCGTCGGGATCAGCGCACAACCAGATG ATTCTCGGTGAGATAACGGGTAACGAGATCGGAGAGGCTGGCCGGGGGCTGGTCTAG
Upstream 100 bases:
>100_bases TAACCCCACGCAGAAAACATCCTTCCGGAAGCTGAAGCCCATGACCACCCAGACCAAGGCCAAGCCCGCCGCTAACACGG CAGAGACCTCCACCCCGCGC
Downstream 100 bases:
>100_bases GCCGCCGATCGGGGCCGGAATACGGGAAGCATGATGGACGCTGCAGGTATCTTCGACTGGCTGAAGGGCAATACCGAGAT TATTATCGGTGTTCTCTCGG
Product: acetolactate synthase large subunit, biosynthetic type
Products: NA
Alternate protein names: AHAS-III; ALS-III; Acetohydroxy-acid synthase III large subunit [H]
Number of amino acids: Translated: 578; Mature: 578
Protein sequence:
>578_residues MMTGAQIVVEALREQGVSVMFGYPGGAVLPIYDALYGQDAIRHILVRHEQGAGHAAEGYARSTGKCGVALVTSGPGATNM VTPITDAMMDSIPMVVLTGQVPTHLIGTDAFQECDTTGITRTCAKHNYLVTDVNQLARTIHEAFYIATNGRPGPVVIDIP KDIQFATGPYVGKAGILKPTYVPQTEPAPEAIKAVVDLMTKAWRPIFYTGGGVINSGPRASKLLRELQEMTGIPVTSTLM GLGAFPANHADWLGMVGMHGSFEANNAMHDCDLMICVGARFDDRVTGRVDAFSPNSKKVHIDIDASSINKIVRVDIPVLA DCAQALEAILKELKARKAQLPDLAPWKEEIGAWRARRCFAYKGSSDVIKPQYAVERLYALTKDHDAYITTEVGQHQMWAA QFYHFNEPNRWMTSGGLGTMGYGLPAAVGVQAAHPDALVIDIAGEASIQMMMQELSTAVQHKLPVKVFILNNEWMGMVRQ WQELLHGERYSHSYSESLPDFVKLADALGAYGIRCDDPAELDGKILEMVNHPGPVLFDCRVERAENCLPMIPSGSAHNQM ILGEITGNEIGEAGRGLV
Sequences:
>Translated_578_residues MMTGAQIVVEALREQGVSVMFGYPGGAVLPIYDALYGQDAIRHILVRHEQGAGHAAEGYARSTGKCGVALVTSGPGATNM VTPITDAMMDSIPMVVLTGQVPTHLIGTDAFQECDTTGITRTCAKHNYLVTDVNQLARTIHEAFYIATNGRPGPVVIDIP KDIQFATGPYVGKAGILKPTYVPQTEPAPEAIKAVVDLMTKAWRPIFYTGGGVINSGPRASKLLRELQEMTGIPVTSTLM GLGAFPANHADWLGMVGMHGSFEANNAMHDCDLMICVGARFDDRVTGRVDAFSPNSKKVHIDIDASSINKIVRVDIPVLA DCAQALEAILKELKARKAQLPDLAPWKEEIGAWRARRCFAYKGSSDVIKPQYAVERLYALTKDHDAYITTEVGQHQMWAA QFYHFNEPNRWMTSGGLGTMGYGLPAAVGVQAAHPDALVIDIAGEASIQMMMQELSTAVQHKLPVKVFILNNEWMGMVRQ WQELLHGERYSHSYSESLPDFVKLADALGAYGIRCDDPAELDGKILEMVNHPGPVLFDCRVERAENCLPMIPSGSAHNQM ILGEITGNEIGEAGRGLV >Mature_578_residues MMTGAQIVVEALREQGVSVMFGYPGGAVLPIYDALYGQDAIRHILVRHEQGAGHAAEGYARSTGKCGVALVTSGPGATNM VTPITDAMMDSIPMVVLTGQVPTHLIGTDAFQECDTTGITRTCAKHNYLVTDVNQLARTIHEAFYIATNGRPGPVVIDIP KDIQFATGPYVGKAGILKPTYVPQTEPAPEAIKAVVDLMTKAWRPIFYTGGGVINSGPRASKLLRELQEMTGIPVTSTLM GLGAFPANHADWLGMVGMHGSFEANNAMHDCDLMICVGARFDDRVTGRVDAFSPNSKKVHIDIDASSINKIVRVDIPVLA DCAQALEAILKELKARKAQLPDLAPWKEEIGAWRARRCFAYKGSSDVIKPQYAVERLYALTKDHDAYITTEVGQHQMWAA QFYHFNEPNRWMTSGGLGTMGYGLPAAVGVQAAHPDALVIDIAGEASIQMMMQELSTAVQHKLPVKVFILNNEWMGMVRQ WQELLHGERYSHSYSESLPDFVKLADALGAYGIRCDDPAELDGKILEMVNHPGPVLFDCRVERAENCLPMIPSGSAHNQM ILGEITGNEIGEAGRGLV
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI21361361, Length=555, Percent_Identity=26.4864864864865, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI93004078, Length=560, Percent_Identity=23.2142857142857, Blast_Score=132, Evalue=1e-30, Organism=Escherichia coli, GI87081685, Length=571, Percent_Identity=49.3870402802102, Blast_Score=560, Evalue=1e-161, Organism=Escherichia coli, GI1790104, Length=572, Percent_Identity=40.9090909090909, Blast_Score=449, Evalue=1e-127, Organism=Escherichia coli, GI1786717, Length=555, Percent_Identity=32.6126126126126, Blast_Score=297, Evalue=2e-81, Organism=Escherichia coli, GI1787096, Length=550, Percent_Identity=26.7272727272727, Blast_Score=180, Evalue=2e-46, Organism=Escherichia coli, GI1788716, Length=572, Percent_Identity=25, Blast_Score=146, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17542570, Length=569, Percent_Identity=26.1862917398945, Blast_Score=144, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17531299, Length=507, Percent_Identity=25.2465483234714, Blast_Score=125, Evalue=6e-29, Organism=Caenorhabditis elegans, GI17531301, Length=507, Percent_Identity=25.2465483234714, Blast_Score=124, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6323755, Length=582, Percent_Identity=46.3917525773196, Blast_Score=513, Evalue=1e-146, Organism=Saccharomyces cerevisiae, GI6320816, Length=495, Percent_Identity=25.2525252525253, Blast_Score=100, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6321524, Length=538, Percent_Identity=22.1189591078067, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI19922626, Length=476, Percent_Identity=25.6302521008403, Blast_Score=136, Evalue=3e-32,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 62752; Mature: 62752
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTGAQIVVEALREQGVSVMFGYPGGAVLPIYDALYGQDAIRHILVRHEQGAGHAAEGYA CCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCC RSTGKCGVALVTSGPGATNMVTPITDAMMDSIPMVVLTGQVPTHLIGTDAFQECDTTGIT CCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHCCHHHHHCCCCCCH RTCAKHNYLVTDVNQLARTIHEAFYIATNGRPGPVVIDIPKDIQFATGPYVGKAGILKPT HHHHHCCEEEECHHHHHHHHHHHEEEEECCCCCCEEEECCCCCEECCCCCCCCCCCCCCC YVPQTEPAPEAIKAVVDLMTKAWRPIFYTGGGVINSGPRASKLLRELQEMTGIPVTSTLM CCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHH GLGAFPANHADWLGMVGMHGSFEANNAMHDCDLMICVGARFDDRVTGRVDAFSPNSKKVH HHCCCCCCCCCHHHEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCEEE IDIDASSINKIVRVDIPVLADCAQALEAILKELKARKAQLPDLAPWKEEIGAWRARRCFA EEEEHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEE YKGSSDVIKPQYAVERLYALTKDHDAYITTEVGQHQMWAAQFYHFNEPNRWMTSGGLGTM ECCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHEECCCCCCEEECCCCCCC GYGLPAAVGVQAAHPDALVIDIAGEASIQMMMQELSTAVQHKLPVKVFILNNEWMGMVRQ CCCCCHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH WQELLHGERYSHSYSESLPDFVKLADALGAYGIRCDDPAELDGKILEMVNHPGPVLFDCR HHHHHCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEE VERAENCLPMIPSGSAHNQMILGEITGNEIGEAGRGLV HHHHCCCCCCCCCCCCCCEEEEEEECCCHHCCCCCCCC >Mature Secondary Structure MMTGAQIVVEALREQGVSVMFGYPGGAVLPIYDALYGQDAIRHILVRHEQGAGHAAEGYA CCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCC RSTGKCGVALVTSGPGATNMVTPITDAMMDSIPMVVLTGQVPTHLIGTDAFQECDTTGIT CCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHCCHHHHHCCCCCCH RTCAKHNYLVTDVNQLARTIHEAFYIATNGRPGPVVIDIPKDIQFATGPYVGKAGILKPT HHHHHCCEEEECHHHHHHHHHHHEEEEECCCCCCEEEECCCCCEECCCCCCCCCCCCCCC YVPQTEPAPEAIKAVVDLMTKAWRPIFYTGGGVINSGPRASKLLRELQEMTGIPVTSTLM CCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHH GLGAFPANHADWLGMVGMHGSFEANNAMHDCDLMICVGARFDDRVTGRVDAFSPNSKKVH HHCCCCCCCCCHHHEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCEEE IDIDASSINKIVRVDIPVLADCAQALEAILKELKARKAQLPDLAPWKEEIGAWRARRCFA EEEEHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEE YKGSSDVIKPQYAVERLYALTKDHDAYITTEVGQHQMWAAQFYHFNEPNRWMTSGGLGTM ECCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHEECCCCCCEEECCCCCCC GYGLPAAVGVQAAHPDALVIDIAGEASIQMMMQELSTAVQHKLPVKVFILNNEWMGMVRQ CCCCCHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH WQELLHGERYSHSYSESLPDFVKLADALGAYGIRCDDPAELDGKILEMVNHPGPVLFDCR HHHHHCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEE VERAENCLPMIPSGSAHNQMILGEITGNEIGEAGRGLV HHHHCCCCCCCCCCCCCCEEEEEEECCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6308579; 1630901; 9278503; 3891724; 9298646 [H]