| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799165
Identifier: 114799165
GI number: 114799165
Start: 3554003
End: 3556321
Strand: Reverse
Name: 114799165
Synonym: HNE_3412
Alternate gene names: NA
Gene position: 3556321-3554003 (Counterclockwise)
Preceding gene: 114798107
Following gene: 114797973
Centisome position: 95.99
GC content: 64.29
Gene sequence:
>2319_bases ATGTTGAAACACTACACTGCGAGGACGGCGCGCGCTGCAATCGCCATGGCCCTCGGCGGCGCAGCCCTGCTGACGGGATG CGACCAGATCGATACGCGAATTGAGCGCGCCCGAGAGATCGCGGACGCCTCCGTTGAACAGATCAACGGCGAGACCGTGA TCGACCCCACTTACCGCAATCTGGAAAGCGCCTCCCCCGAGGATCGCGCCCTGGCGGGCACCGTCGTGACGGCAGAATTC GCGATTGATGATGAAGACCGCCCGATGTTCGCCATCGGCTCAATCATCGCCAAGCCGCTCGCCATTCCGGACGCCGAATC GGTCGATATTGTCGAGGATGCGGAGCAGATGGAGGCCGAGCTCGACTATTTCGACTCGCCAGAAGGCGAAGCGATGATGG ACGCGGAGGAGGCGCCAGCCGCCGCCCCGCCAGCGCCGGCACCCCTCACGACCCAGGAGCCCGGCTCGGTATTCCTTGAA GTGCAGCCGGCGCAGGTTATGCCGAAAATCACGCTCGATCCGCGTGATGCCGAGGAATCCCGCGAAGAGATCGCGCAAGC GAGCCGGAAGTTTGATCAGGTGGTGATCCAGGACGACACCAAGCGCCTGCAGATGCGCAGTCTCTCGAAGCAAGATCTTG AGGCCATGGCGCCTGAAGATCGCGCCGAGACCCGCAAGCTGGCCCGCCGCGCGCCAATCGAGCGGGAAGTGGTCCGCAAA CAGCTTGATGCGAACACTGTCATGCTCGACACGATGTCCAAATACGGCGTCGGCGGGGAAGTGGCGCTGTCGCGTCAGGG GCAGATGGTCATCCAGATCGGCGCCGATGGTGCAAACCCCACCCAGTTTACCGGCCGCAACGGTCCGGCAGACTTCCTCG CGCGCACGGAAGCCGCAGAATGCCCGGAAGGCGCGGATGCCGCCTCTGTCGGTGACGACCTTGCGGTTGCCACAGCCTGC GTCGTGCGCGACCTGCGCGCATCAGGCCAGTTCGAATATGTCGAACAGGATTACATTTTCCAGAACCAGTTTGCGCGGAA ACCCAAAGACACCCCCTACGGCACCCCCGGCGAGACCAAAACTGGGTCCACAGGCTCAACCGGCTCACCCACGGGCCAGC CGGTCAGCCAGGAGCCGGATGATCCGCTCTGGGCGCTGCAATGGCATTTCCGCGACAAGGGCACGTCCGAAGGCCGCACG GCTGGCGGAGCGGGCTTTGAAAGCTTTTGGAACCGTCAGGGCGTTAGAGGATCCGACGGCATCGTCGTCGCAGTCGTCGA TACCGGCCTGCAGATGAGCCATCCCGACATCGCCGCCTCGCCCAACATCATGCAGGGCTATGACATGGTCTCCGATCCCC GCATGGGCAATGACGGCGACGGGCGCGATATTGATGCAAACGATCCCGGCGATATGTGCGATCCGAACAAGCCCAATGCC GCAGACAGTTTCCACGGCACGCATGTGGCAGGCACAATTGGCGCGGCCGCCACCAACAACGGTTCCGGCGTTGCCGGCGG CGCGTGGGACGTGCGCATCGTACCGGTGCGCGCGCTCGGCAAGTGCGGTGGGCGCCTGTCGGACATCAATGATGCGATCC GCTGGGCAGCGGGGCTGATCCCGGCCGAAGTCAATGAAGGACCACAGGTCTGGACCGAGGTCTGGAACGAGAACCCGGCC GACATCATCAACCTCTCCATTGGCCTGCTCGGAGCCTGCCCGGCCTCGCTGCAGGACGCCATCGACGCGGTGACCGAAGA GGGCGTGATCGTTGTTTCGGCGGCGGGCAATGCCCGTATGTCGACAAGCCTCTATGCGCCCGCCGGCTGTCGCAATGTCG TGACGGTTGCCGCAAGCGATGCCCGTGGCCAGATCGCGCCCTACTCGAACTTCGGTCCCGAAGTCATGGTGCTCGCGCCA GGCGGCGACCTGACGCGTGACGATAACGGTGACGGTAAACCCGATGGCGTACTCTCCACCAAGGCGGCCACCAACTGCTA CGATCCTGTCACCGGCGAAGGCGTGGAGAATTGTTTCTACGCGTATGAGCAGGGTACCAGCATGGCCGCGCCACATGTCT CGGCCGCGCTCGCATTGCTCAAGTCTCGCGATCCGGCCGCCAGCCGCGACGACATCATCAGCACACTGAGGGCGGCGCTG GACCCGCGCGAGAGCCTGCAATGCGCTGGCCTCTGCACGCAGTATCCCGGCGCTGCGCCCATCGAGGGCAGCCCTGATAT GTGTGCCCGGCCCTGTGGAGTAGGGCTGCTCAACATGGCCAATGTGCCGCTCAAGGCGACAGACGGAGGCGGTCGCTGA
Upstream 100 bases:
>100_bases ATTTGCGGATTGGACAGGGCGGCTGCCTCGTCATAATCTCAACACAGCGTTAACCTAATGTGCTGGGGCGTTCATTGGCA ATCGCATGGGGATATCCGGC
Downstream 100 bases:
>100_bases GATGAACCGGCCCCGGATTCCCATGGATGCGCGCGGCCCGCTCGGCCTGCTTGGCATCGGCCTTCTCGCCGGCGCTGCAG GGCTTGCCGTGGTCGGCACG
Product: subtilase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 772; Mature: 772
Protein sequence:
>772_residues MLKHYTARTARAAIAMALGGAALLTGCDQIDTRIERAREIADASVEQINGETVIDPTYRNLESASPEDRALAGTVVTAEF AIDDEDRPMFAIGSIIAKPLAIPDAESVDIVEDAEQMEAELDYFDSPEGEAMMDAEEAPAAAPPAPAPLTTQEPGSVFLE VQPAQVMPKITLDPRDAEESREEIAQASRKFDQVVIQDDTKRLQMRSLSKQDLEAMAPEDRAETRKLARRAPIEREVVRK QLDANTVMLDTMSKYGVGGEVALSRQGQMVIQIGADGANPTQFTGRNGPADFLARTEAAECPEGADAASVGDDLAVATAC VVRDLRASGQFEYVEQDYIFQNQFARKPKDTPYGTPGETKTGSTGSTGSPTGQPVSQEPDDPLWALQWHFRDKGTSEGRT AGGAGFESFWNRQGVRGSDGIVVAVVDTGLQMSHPDIAASPNIMQGYDMVSDPRMGNDGDGRDIDANDPGDMCDPNKPNA ADSFHGTHVAGTIGAAATNNGSGVAGGAWDVRIVPVRALGKCGGRLSDINDAIRWAAGLIPAEVNEGPQVWTEVWNENPA DIINLSIGLLGACPASLQDAIDAVTEEGVIVVSAAGNARMSTSLYAPAGCRNVVTVAASDARGQIAPYSNFGPEVMVLAP GGDLTRDDNGDGKPDGVLSTKAATNCYDPVTGEGVENCFYAYEQGTSMAAPHVSAALALLKSRDPAASRDDIISTLRAAL DPRESLQCAGLCTQYPGAAPIEGSPDMCARPCGVGLLNMANVPLKATDGGGR
Sequences:
>Translated_772_residues MLKHYTARTARAAIAMALGGAALLTGCDQIDTRIERAREIADASVEQINGETVIDPTYRNLESASPEDRALAGTVVTAEF AIDDEDRPMFAIGSIIAKPLAIPDAESVDIVEDAEQMEAELDYFDSPEGEAMMDAEEAPAAAPPAPAPLTTQEPGSVFLE VQPAQVMPKITLDPRDAEESREEIAQASRKFDQVVIQDDTKRLQMRSLSKQDLEAMAPEDRAETRKLARRAPIEREVVRK QLDANTVMLDTMSKYGVGGEVALSRQGQMVIQIGADGANPTQFTGRNGPADFLARTEAAECPEGADAASVGDDLAVATAC VVRDLRASGQFEYVEQDYIFQNQFARKPKDTPYGTPGETKTGSTGSTGSPTGQPVSQEPDDPLWALQWHFRDKGTSEGRT AGGAGFESFWNRQGVRGSDGIVVAVVDTGLQMSHPDIAASPNIMQGYDMVSDPRMGNDGDGRDIDANDPGDMCDPNKPNA ADSFHGTHVAGTIGAAATNNGSGVAGGAWDVRIVPVRALGKCGGRLSDINDAIRWAAGLIPAEVNEGPQVWTEVWNENPA DIINLSIGLLGACPASLQDAIDAVTEEGVIVVSAAGNARMSTSLYAPAGCRNVVTVAASDARGQIAPYSNFGPEVMVLAP GGDLTRDDNGDGKPDGVLSTKAATNCYDPVTGEGVENCFYAYEQGTSMAAPHVSAALALLKSRDPAASRDDIISTLRAAL DPRESLQCAGLCTQYPGAAPIEGSPDMCARPCGVGLLNMANVPLKATDGGGR >Mature_772_residues MLKHYTARTARAAIAMALGGAALLTGCDQIDTRIERAREIADASVEQINGETVIDPTYRNLESASPEDRALAGTVVTAEF AIDDEDRPMFAIGSIIAKPLAIPDAESVDIVEDAEQMEAELDYFDSPEGEAMMDAEEAPAAAPPAPAPLTTQEPGSVFLE VQPAQVMPKITLDPRDAEESREEIAQASRKFDQVVIQDDTKRLQMRSLSKQDLEAMAPEDRAETRKLARRAPIEREVVRK QLDANTVMLDTMSKYGVGGEVALSRQGQMVIQIGADGANPTQFTGRNGPADFLARTEAAECPEGADAASVGDDLAVATAC VVRDLRASGQFEYVEQDYIFQNQFARKPKDTPYGTPGETKTGSTGSTGSPTGQPVSQEPDDPLWALQWHFRDKGTSEGRT AGGAGFESFWNRQGVRGSDGIVVAVVDTGLQMSHPDIAASPNIMQGYDMVSDPRMGNDGDGRDIDANDPGDMCDPNKPNA ADSFHGTHVAGTIGAAATNNGSGVAGGAWDVRIVPVRALGKCGGRLSDINDAIRWAAGLIPAEVNEGPQVWTEVWNENPA DIINLSIGLLGACPASLQDAIDAVTEEGVIVVSAAGNARMSTSLYAPAGCRNVVTVAASDARGQIAPYSNFGPEVMVLAP GGDLTRDDNGDGKPDGVLSTKAATNCYDPVTGEGVENCFYAYEQGTSMAAPHVSAALALLKSRDPAASRDDIISTLRAAL DPRESLQCAGLCTQYPGAAPIEGSPDMCARPCGVGLLNMANVPLKATDGGGR
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319893, Length=299, Percent_Identity=24.7491638795987, Blast_Score=72, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6320775, Length=289, Percent_Identity=28.719723183391, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007280 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8; PF04151 PPC [H]
EC number: NA
Molecular weight: Translated: 81283; Mature: 81283
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKHYTARTARAAIAMALGGAALLTGCDQIDTRIERAREIADASVEQINGETVIDPTYRN CCCCHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHH LESASPEDRALAGTVVTAEFAIDDEDRPMFAIGSIIAKPLAIPDAESVDIVEDAEQMEAE HCCCCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH LDYFDSPEGEAMMDAEEAPAAAPPAPAPLTTQEPGSVFLEVQPAQVMPKITLDPRDAEES HCCCCCCCCCEEECHHHCCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCEEEECCCCHHHH REEIAQASRKFDQVVIQDDTKRLQMRSLSKQDLEAMAPEDRAETRKLARRAPIEREVVRK HHHHHHHHHHHHEEEECCCHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHH QLDANTVMLDTMSKYGVGGEVALSRQGQMVIQIGADGANPTQFTGRNGPADFLARTEAAE HHCCCEEEEECHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCHHC CPEGADAASVGDDLAVATACVVRDLRASGQFEYVEQDYIFQNQFARKPKDTPYGTPGETK CCCCCCHHHCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCC TGSTGSTGSPTGQPVSQEPDDPLWALQWHFRDKGTSEGRTAGGAGFESFWNRQGVRGSDG CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCC IVVAVVDTGLQMSHPDIAASPNIMQGYDMVSDPRMGNDGDGRDIDANDPGDMCDPNKPNA EEEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ADSFHGTHVAGTIGAAATNNGSGVAGGAWDVRIVPVRALGKCGGRLSDINDAIRWAAGLI CCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEHHHHHHCCCCHHHHHHHHHHHHCCC PAEVNEGPQVWTEVWNENPADIINLSIGLLGACPASLQDAIDAVTEEGVIVVSAAGNARM CCCCCCCHHHHHHHHCCCCCCEEEEEHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCEE STSLYAPAGCRNVVTVAASDARGQIAPYSNFGPEVMVLAPGGDLTRDDNGDGKPDGVLST CCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEC KAATNCYDPVTGEGVENCFYAYEQGTSMAAPHVSAALALLKSRDPAASRDDIISTLRAAL CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC DPRESLQCAGLCTQYPGAAPIEGSPDMCARPCGVGLLNMANVPLKATDGGGR CHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCHHHCCCCEEECCCCCC >Mature Secondary Structure MLKHYTARTARAAIAMALGGAALLTGCDQIDTRIERAREIADASVEQINGETVIDPTYRN CCCCHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHH LESASPEDRALAGTVVTAEFAIDDEDRPMFAIGSIIAKPLAIPDAESVDIVEDAEQMEAE HCCCCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH LDYFDSPEGEAMMDAEEAPAAAPPAPAPLTTQEPGSVFLEVQPAQVMPKITLDPRDAEES HCCCCCCCCCEEECHHHCCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCEEEECCCCHHHH REEIAQASRKFDQVVIQDDTKRLQMRSLSKQDLEAMAPEDRAETRKLARRAPIEREVVRK HHHHHHHHHHHHEEEECCCHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHH QLDANTVMLDTMSKYGVGGEVALSRQGQMVIQIGADGANPTQFTGRNGPADFLARTEAAE HHCCCEEEEECHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCHHC CPEGADAASVGDDLAVATACVVRDLRASGQFEYVEQDYIFQNQFARKPKDTPYGTPGETK CCCCCCHHHCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCC TGSTGSTGSPTGQPVSQEPDDPLWALQWHFRDKGTSEGRTAGGAGFESFWNRQGVRGSDG CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCC IVVAVVDTGLQMSHPDIAASPNIMQGYDMVSDPRMGNDGDGRDIDANDPGDMCDPNKPNA EEEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ADSFHGTHVAGTIGAAATNNGSGVAGGAWDVRIVPVRALGKCGGRLSDINDAIRWAAGLI CCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEHHHHHHCCCCHHHHHHHHHHHHCCC PAEVNEGPQVWTEVWNENPADIINLSIGLLGACPASLQDAIDAVTEEGVIVVSAAGNARM CCCCCCCHHHHHHHHCCCCCCEEEEEHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCEE STSLYAPAGCRNVVTVAASDARGQIAPYSNFGPEVMVLAPGGDLTRDDNGDGKPDGVLST CCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEC KAATNCYDPVTGEGVENCFYAYEQGTSMAAPHVSAALALLKSRDPAASRDDIISTLRAAL CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC DPRESLQCAGLCTQYPGAAPIEGSPDMCARPCGVGLLNMANVPLKATDGGGR CHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCHHHCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2187155; 12024217 [H]