Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114799125

Identifier: 114799125

GI number: 114799125

Start: 1697350

End: 1698039

Strand: Reverse

Name: 114799125

Synonym: HNE_1656

Alternate gene names: NA

Gene position: 1698039-1697350 (Counterclockwise)

Preceding gene: 114797694

Following gene: 114797275

Centisome position: 45.83

GC content: 69.42

Gene sequence:

>690_bases
ATGATCAAAGGCACGTCCTCCTACGCCCGCGCGCGCCGTCCCCGTCCCGGCTCTGCCGCCTGGACGCTGGCGCGCAGCCT
GCTCCTTGCGCTGATCATTGCCTGCCGCTGCCTGCCCGGCATGACGCGCGGCAAAACCCGCACGCGGCTCCTGCGGTTTC
TGCAAGCGCGCACCGGCAGGATGGAACACATCTTCCGTTGCCTCCTCATCTGCATGCGCGCTGCCCCGCACGCCCCCAAA
CCCGCGCCCTTCACGCCCCGCGCTTCGGCCTGCGCGCCACGGCCACCCCGGCCCCGCCGCCTGCCGGCGCGTTTTTCCCT
TAATCTCTCACAGCTGGCCAAAGACCTGGAAAAATACGGCGCGCCTGCGCCCGCCCTGGCAAACCGCAAGAAACGCCGGT
CATCGCCCACCCAGACACCAGATCGCTCGCAGACACCGCGCGGCCCGACAGCCGCTGCGCCCGTCGCCGATCCCCTCAGC
CTGCTCGATGCGCGTCTCAAGGCCATGCGGGCGATCCTCGACGATCCCCATGCCCATGCCATCCGGTTCGCCTCTCTTCT
GAAAGCGGCCGGCATTCCCATGCGCCGCGTCAAACCGGTTATCCCCCGCGCCGAACTCTGGGCGCTTCTCAATCATGCCG
CGCCGCCAAAGGCGCGCGCTGCGCCCGGCCACTTCGCGGACACGTCCTGA

Upstream 100 bases:

>100_bases
GGGATAGGAAAAGCCCTTGTCCACGGGGGTTTTCCTGTAACCATTACACATCCCCGCCATCGAATCCGCCGGGATAGGCT
CTGCCGCCACATTTGACGGC

Downstream 100 bases:

>100_bases
CGCCCGCCTTTGCCACCAATTCAGCCCCTGCCGGCCACGCCCATCGCGTGTTCCGGGCAAAACGGCTGCGGTCGCTGTTG
CCGCCCGGAATTTACCCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MIKGTSSYARARRPRPGSAAWTLARSLLLALIIACRCLPGMTRGKTRTRLLRFLQARTGRMEHIFRCLLICMRAAPHAPK
PAPFTPRASACAPRPPRPRRLPARFSLNLSQLAKDLEKYGAPAPALANRKKRRSSPTQTPDRSQTPRGPTAAAPVADPLS
LLDARLKAMRAILDDPHAHAIRFASLLKAAGIPMRRVKPVIPRAELWALLNHAAPPKARAAPGHFADTS

Sequences:

>Translated_229_residues
MIKGTSSYARARRPRPGSAAWTLARSLLLALIIACRCLPGMTRGKTRTRLLRFLQARTGRMEHIFRCLLICMRAAPHAPK
PAPFTPRASACAPRPPRPRRLPARFSLNLSQLAKDLEKYGAPAPALANRKKRRSSPTQTPDRSQTPRGPTAAAPVADPLS
LLDARLKAMRAILDDPHAHAIRFASLLKAAGIPMRRVKPVIPRAELWALLNHAAPPKARAAPGHFADTS
>Mature_229_residues
MIKGTSSYARARRPRPGSAAWTLARSLLLALIIACRCLPGMTRGKTRTRLLRFLQARTGRMEHIFRCLLICMRAAPHAPK
PAPFTPRASACAPRPPRPRRLPARFSLNLSQLAKDLEKYGAPAPALANRKKRRSSPTQTPDRSQTPRGPTAAAPVADPLS
LLDARLKAMRAILDDPHAHAIRFASLLKAAGIPMRRVKPVIPRAELWALLNHAAPPKARAAPGHFADTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25045; Mature: 25045

Theoretical pI: Translated: 12.41; Mature: 12.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKGTSSYARARRPRPGSAAWTLARSLLLALIIACRCLPGMTRGKTRTRLLRFLQARTGR
CCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCH
MEHIFRCLLICMRAAPHAPKPAPFTPRASACAPRPPRPRRLPARFSLNLSQLAKDLEKYG
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHC
APAPALANRKKRRSSPTQTPDRSQTPRGPTAAAPVADPLSLLDARLKAMRAILDDPHAHA
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
IRFASLLKAAGIPMRRVKPVIPRAELWALLNHAAPPKARAAPGHFADTS
HHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIKGTSSYARARRPRPGSAAWTLARSLLLALIIACRCLPGMTRGKTRTRLLRFLQARTGR
CCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCH
MEHIFRCLLICMRAAPHAPKPAPFTPRASACAPRPPRPRRLPARFSLNLSQLAKDLEKYG
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHC
APAPALANRKKRRSSPTQTPDRSQTPRGPTAAAPVADPLSLLDARLKAMRAILDDPHAHA
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
IRFASLLKAAGIPMRRVKPVIPRAELWALLNHAAPPKARAAPGHFADTS
HHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA