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The map label for this gene is ocd2 [H]

Identifier: 114799105

GI number: 114799105

Start: 2747273

End: 2748232

Strand: Reverse

Name: ocd2 [H]

Synonym: HNE_2590

Alternate gene names: 114799105

Gene position: 2748232-2747273 (Counterclockwise)

Preceding gene: 114798112

Following gene: 114800108

Centisome position: 74.18

GC content: 61.15

Gene sequence:

>960_bases
GTGATCTTCATCGGCGCAGACGAAATCCGGCAGACGCTGAGCTATACGAGCTGTATCGAAGTGATGCGGACGGCGATGGC
GCGCCTTTCTGCCGGAAAAACGCAGCAGATGTTGCGCCAGATTCTGCCTCTGGAAGCCGGCCGGATGTTCGGCATCATGG
GCGGAACGCTTGGTCCCGGCGGTCCGTTTGGCTCAAAGCTGGTTTCGGTTATGCCCCACCGCGCCGAAGGCGGGCCCTCT
TCACATCAGGGCGCTGTGGTCATTTTTGACCCAGACAGCGGCGCGCCACTCTGTCAGCTGGAAGCGGGTATGCTCACGGC
AATCCGGACAGCCAGCGCGAGCGCGATGGCAACGGATGTTCTGGCGCGGGAGGGCGCCCACACGCTGGCGATCCTCGGTA
CAGGAGAACAGGCCTGGCATCATGCTTGCGCGTTGCCCGCCGTGCGCCCCTTCGATGAAATCCGGATTTGGGGACGCAGC
CGAGACCGGGCAGACGCGCTGGCGGATAAAGTCCGTAAACAAACGGGAATCGTGTGCGCGGCGTACTCTGACGTTGCCGA
ATCTGTGGCCGGTGCAGACGTGATCTGTACAGTGACCGGGGCGGCTGACCCGCTACTGGATGCGGCCATGGTGAGCCCCG
GTACGCATCTGAATGTGGTAGGCTCCAGTTTTGATGGCCCGCGGGAAATTGACGACACGCTGGTATCAGCCGCGCGCTAT
TTCGCAGACTCGCGGGCATCCGTTCTGGCGCAGGGATCGGAGATCCGGCATGCCATTGCGAGCGGCGCCGTGACCGAAGC
TCACCTGCTGGGCGAAATCGGTGAGGTTGTGCTCGGCAAGGTGGCCGGCCGGATGACGCCCGATAACATAACACTATACA
AATCTCTGGGGCATATCGTTCAGGATATTGCCTCGGGCTATCATGTTTATCAGATGATCCATGGGAGGCATTCTGGATGA

Upstream 100 bases:

>100_bases
TCGGCGGTCACATGGCGTATTCGGTGGACGGGTCTGCGCAGGCATTCGGCGAGGATATACGCAGCTGGATTCGCGGCTGG
GCTGAGATGGGCGAAGGCGA

Downstream 100 bases:

>100_bases
TGCGGTTCAGGCTTTTGGCAGGCGCGTGTGCGGCCGTGGTCGCGCTGGCGCTGAATGCCTGCGCGCAGACAGGATCGACT
GTATCCGAACCCTCCGAGGC

Product: ornithine cyclodeaminase/mu-crystallin family protein

Products: NA

Alternate protein names: OCD 2 [H]

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MIFIGADEIRQTLSYTSCIEVMRTAMARLSAGKTQQMLRQILPLEAGRMFGIMGGTLGPGGPFGSKLVSVMPHRAEGGPS
SHQGAVVIFDPDSGAPLCQLEAGMLTAIRTASASAMATDVLAREGAHTLAILGTGEQAWHHACALPAVRPFDEIRIWGRS
RDRADALADKVRKQTGIVCAAYSDVAESVAGADVICTVTGAADPLLDAAMVSPGTHLNVVGSSFDGPREIDDTLVSAARY
FADSRASVLAQGSEIRHAIASGAVTEAHLLGEIGEVVLGKVAGRMTPDNITLYKSLGHIVQDIASGYHVYQMIHGRHSG

Sequences:

>Translated_319_residues
MIFIGADEIRQTLSYTSCIEVMRTAMARLSAGKTQQMLRQILPLEAGRMFGIMGGTLGPGGPFGSKLVSVMPHRAEGGPS
SHQGAVVIFDPDSGAPLCQLEAGMLTAIRTASASAMATDVLAREGAHTLAILGTGEQAWHHACALPAVRPFDEIRIWGRS
RDRADALADKVRKQTGIVCAAYSDVAESVAGADVICTVTGAADPLLDAAMVSPGTHLNVVGSSFDGPREIDDTLVSAARY
FADSRASVLAQGSEIRHAIASGAVTEAHLLGEIGEVVLGKVAGRMTPDNITLYKSLGHIVQDIASGYHVYQMIHGRHSG
>Mature_319_residues
MIFIGADEIRQTLSYTSCIEVMRTAMARLSAGKTQQMLRQILPLEAGRMFGIMGGTLGPGGPFGSKLVSVMPHRAEGGPS
SHQGAVVIFDPDSGAPLCQLEAGMLTAIRTASASAMATDVLAREGAHTLAILGTGEQAWHHACALPAVRPFDEIRIWGRS
RDRADALADKVRKQTGIVCAAYSDVAESVAGADVICTVTGAADPLLDAAMVSPGTHLNVVGSSFDGPREIDDTLVSAARY
FADSRASVLAQGSEIRHAIASGAVTEAHLLGEIGEVVLGKVAGRMTPDNITLYKSLGHIVQDIASGYHVYQMIHGRHSG

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI4503065, Length=314, Percent_Identity=34.3949044585987, Blast_Score=160, Evalue=1e-39,
Organism=Homo sapiens, GI62241008, Length=277, Percent_Identity=35.0180505415162, Blast_Score=151, Evalue=8e-37,
Organism=Drosophila melanogaster, GI24642678, Length=344, Percent_Identity=24.4186046511628, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 33427; Mature: 33427

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFIGADEIRQTLSYTSCIEVMRTAMARLSAGKTQQMLRQILPLEAGRMFGIMGGTLGPG
CEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEECCCCCCCC
GPFGSKLVSVMPHRAEGGPSSHQGAVVIFDPDSGAPLCQLEAGMLTAIRTASASAMATDV
CCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEECHHHHHHHHHCCHHHHHHHH
LAREGAHTLAILGTGEQAWHHACALPAVRPFDEIRIWGRSRDRADALADKVRKQTGIVCA
HHHCCCCEEEEEECCHHHHHHHHCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHCEEEE
AYSDVAESVAGADVICTVTGAADPLLDAAMVSPGTHLNVVGSSFDGPREIDDTLVSAARY
EHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHH
FADSRASVLAQGSEIRHAIASGAVTEAHLLGEIGEVVLGKVAGRMTPDNITLYKSLGHIV
HHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
QDIASGYHVYQMIHGRHSG
HHHHCCHHHHHHHHCCCCC
>Mature Secondary Structure
MIFIGADEIRQTLSYTSCIEVMRTAMARLSAGKTQQMLRQILPLEAGRMFGIMGGTLGPG
CEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEECCCCCCCC
GPFGSKLVSVMPHRAEGGPSSHQGAVVIFDPDSGAPLCQLEAGMLTAIRTASASAMATDV
CCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEECHHHHHHHHHCCHHHHHHHH
LAREGAHTLAILGTGEQAWHHACALPAVRPFDEIRIWGRSRDRADALADKVRKQTGIVCA
HHHCCCCEEEEEECCHHHHHHHHCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHCEEEE
AYSDVAESVAGADVICTVTGAADPLLDAAMVSPGTHLNVVGSSFDGPREIDDTLVSAARY
EHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHH
FADSRASVLAQGSEIRHAIASGAVTEAHLLGEIGEVVLGKVAGRMTPDNITLYKSLGHIV
HHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
QDIASGYHVYQMIHGRHSG
HHHHCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]