| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is blh [H]
Identifier: 114799100
GI number: 114799100
Start: 476262
End: 477125
Strand: Reverse
Name: blh [H]
Synonym: HNE_0483
Alternate gene names: 114799100
Gene position: 477125-476262 (Counterclockwise)
Preceding gene: 114800118
Following gene: 114798941
Centisome position: 12.88
GC content: 64.35
Gene sequence:
>864_bases ATGCCCGAGATCAAACCGTTTTTTGACCCCGCAACAAACACGGTCACCTATCTCGTCTGGGACAAGGCCACCCGCGACGC CGTCATCATAGACCCCGTGCTGGACTTCGACCCCGCGCCCGCCCGCCTTTCCACGGCATCGGCCGATAAGGTGCTCGCCG CGGCAGAGGCTGAGGGCCTGAAAATCCGCTGGGCGCTCGACACCCACGCCCATGCCGATCACCTTTCGGCCGCTGACTAT GTCCGCCAGAAAACCGGCGCCAAGGTCGGCATCGGCGCGCACATCACCGATGTTCAGAAAATCTTCCGCCCGATGTTCGG CCCCACCTCCGACACGCCGGACGAAACCGTGTTCGACGCCCTCTTCAATGAAGGCGATGAATTCCCGCTCGGCAACGAAA CAATCCGTGTACTGCACACACCCGGCCACACCGCTGCCTGCCTCACCTATCTGATCGGCGACGCCGCCTTCGTGGGCGAT ACCGTCTTCATGCCCGACTATGGCACCGCGCGGGCAGACTTTCCCGGCGGCGACGCCCACGCGCTTTACCGCTCAATCCG CAAGCTGCTCGCCCTGCCGCCCGAAACCCGCATCTTCACCGGCCATGACTATCTCCCCGAAGGCCGCGACAAGCATGCCT GGGAATCCACCGTCGCCCAGCACCGCGCCGCCAACGTCCATGTCCATGACGGCGTCTCGGAAGAAGACTTCGTCACCATG CGCACCACCCGCGACAAAACCCTTGGCGCTCCGCGCCTGATCCTCCCCTCCCTGCAGGTCAACATCCGCGCCGGCACCCT TCCCCCACCAGAATCCGACGGCCAGACCTACCTCCGCCTCCCGGTAAACCGCCTCGGCAAATAG
Upstream 100 bases:
>100_bases GGCGTGTCCAGCGTGAAATATATGATAACTTGCTAAATTAGCAATATCTCATATATTTGAAGCAGACCTGAGATTTGACG ATTCCGCAGAGGAGATTCCC
Downstream 100 bases:
>100_bases TGTATTGCCGCAAGGCCCCCCTCCGTCCGCTTCGCGTCCACCTCCCCCGCTTCGCAGGGGAGGATAACGGCTTGGTCCAA TCCGGTAAGATGGGTAACAA
Product: metallo-beta-lactamase superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MPEIKPFFDPATNTVTYLVWDKATRDAVIIDPVLDFDPAPARLSTASADKVLAAAEAEGLKIRWALDTHAHADHLSAADY VRQKTGAKVGIGAHITDVQKIFRPMFGPTSDTPDETVFDALFNEGDEFPLGNETIRVLHTPGHTAACLTYLIGDAAFVGD TVFMPDYGTARADFPGGDAHALYRSIRKLLALPPETRIFTGHDYLPEGRDKHAWESTVAQHRAANVHVHDGVSEEDFVTM RTTRDKTLGAPRLILPSLQVNIRAGTLPPPESDGQTYLRLPVNRLGK
Sequences:
>Translated_287_residues MPEIKPFFDPATNTVTYLVWDKATRDAVIIDPVLDFDPAPARLSTASADKVLAAAEAEGLKIRWALDTHAHADHLSAADY VRQKTGAKVGIGAHITDVQKIFRPMFGPTSDTPDETVFDALFNEGDEFPLGNETIRVLHTPGHTAACLTYLIGDAAFVGD TVFMPDYGTARADFPGGDAHALYRSIRKLLALPPETRIFTGHDYLPEGRDKHAWESTVAQHRAANVHVHDGVSEEDFVTM RTTRDKTLGAPRLILPSLQVNIRAGTLPPPESDGQTYLRLPVNRLGK >Mature_286_residues PEIKPFFDPATNTVTYLVWDKATRDAVIIDPVLDFDPAPARLSTASADKVLAAAEAEGLKIRWALDTHAHADHLSAADYV RQKTGAKVGIGAHITDVQKIFRPMFGPTSDTPDETVFDALFNEGDEFPLGNETIRVLHTPGHTAACLTYLIGDAAFVGDT VFMPDYGTARADFPGGDAHALYRSIRKLLALPPETRIFTGHDYLPEGRDKHAWESTVAQHRAANVHVHDGVSEEDFVTMR TTRDKTLGAPRLILPSLQVNIRAGTLPPPESDGQTYLRLPVNRLGK
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=270, Percent_Identity=29.2592592592593, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI14150041, Length=258, Percent_Identity=26.7441860465116, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI46361987, Length=198, Percent_Identity=28.2828282828283, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1787158, Length=193, Percent_Identity=33.160621761658, Blast_Score=79, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17538952, Length=267, Percent_Identity=25.4681647940075, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI221330176, Length=283, Percent_Identity=30.3886925795053, Blast_Score=112, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 31414; Mature: 31282
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEIKPFFDPATNTVTYLVWDKATRDAVIIDPVLDFDPAPARLSTASADKVLAAAEAEGL CCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCEECCCCHHHEEEEECCCCE KIRWALDTHAHADHLSAADYVRQKTGAKVGIGAHITDVQKIFRPMFGPTSDTPDETVFDA EEEEEECCCCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHH LFNEGDEFPLGNETIRVLHTPGHTAACLTYLIGDAAFVGDTVFMPDYGTARADFPGGDAH HHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCHHHHCCEEECCCCCCCCCCCCCCHHH ALYRSIRKLLALPPETRIFTGHDYLPEGRDKHAWESTVAQHRAANVHVHDGVSEEDFVTM HHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCEEEEECCCCCCCEEEE RTTRDKTLGAPRLILPSLQVNIRAGTLPPPESDGQTYLRLPVNRLGK EECCCCCCCCCEEEECCEEEEEEECCCCCCCCCCCEEEEECHHHHCC >Mature Secondary Structure PEIKPFFDPATNTVTYLVWDKATRDAVIIDPVLDFDPAPARLSTASADKVLAAAEAEGL CCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCEECCCCHHHEEEEECCCCE KIRWALDTHAHADHLSAADYVRQKTGAKVGIGAHITDVQKIFRPMFGPTSDTPDETVFDA EEEEEECCCCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHH LFNEGDEFPLGNETIRVLHTPGHTAACLTYLIGDAAFVGDTVFMPDYGTARADFPGGDAH HHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCHHHHCCEEECCCCCCCCCCCCCCHHH ALYRSIRKLLALPPETRIFTGHDYLPEGRDKHAWESTVAQHRAANVHVHDGVSEEDFVTM HHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCEEEEECCCCCCCEEEE RTTRDKTLGAPRLILPSLQVNIRAGTLPPPESDGQTYLRLPVNRLGK EECCCCCCCCCEEEECCEEEEEEECCCCCCCCCCCEEEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]