| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is yozG [H]
Identifier: 114799014
GI number: 114799014
Start: 3467095
End: 3467334
Strand: Direct
Name: yozG [H]
Synonym: HNE_3312
Alternate gene names: 114799014
Gene position: 3467095-3467334 (Clockwise)
Preceding gene: 114799603
Following gene: 114797623
Centisome position: 93.58
GC content: 63.75
Gene sequence:
>240_bases ATGACCATTCGCGTGACCCTCGACCGTGTGCTTCTGGAGCGGCGCATGTCGCTGACCGAGCTCTCGGAACGTGTGGGCGT AACCCTCGCCAACCTGTCGATCCTGAAGACCGGCAAGGCCAAGGCGATCCGCTTCTCCACCCTCGAAGCCCTCTGCCGCG AGCTGAAATGCCAGCCCGGCGACCTGCTCGTCTTCGACACCGAGGGCGAAGAAGACGAACGCCAGGTCGCCGCTGAATAG
Upstream 100 bases:
>100_bases GATTTCCGTGGCGGCGCTCTTCATCCTTTCCCAAGTCTTCCGCGAAGGCACCCGCCTGCGCGACGAAGAAAAAATGACGA TCTGAGGAGCACTGAAGGCC
Downstream 100 bases:
>100_bases GTAATCAACGGAAATTCATTGATTATTGAATATCAATGGATTATCATTGATATATGCTGCCTCCCGATCAAGCCTGTCTC CTGTTGTGCGACATCAAGGA
Product: DNA-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MTIRVTLDRVLLERRMSLTELSERVGVTLANLSILKTGKAKAIRFSTLEALCRELKCQPGDLLVFDTEGEEDERQVAAE
Sequences:
>Translated_79_residues MTIRVTLDRVLLERRMSLTELSERVGVTLANLSILKTGKAKAIRFSTLEALCRELKCQPGDLLVFDTEGEEDERQVAAE >Mature_78_residues TIRVTLDRVLLERRMSLTELSERVGVTLANLSILKTGKAKAIRFSTLEALCRELKCQPGDLLVFDTEGEEDERQVAAE
Specific function: Unknown
COG id: COG3655
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001387 - InterPro: IPR010982 [H]
Pfam domain/function: PF01381 HTH_3 [H]
EC number: NA
Molecular weight: Translated: 8878; Mature: 8747
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIRVTLDRVLLERRMSLTELSERVGVTLANLSILKTGKAKAIRFSTLEALCRELKCQPG CEEEEEHHHHHHHHHCCHHHHHHHHCEEEECEEEEECCCCCEEHHHHHHHHHHHHCCCCC DLLVFDTEGEEDERQVAAE CEEEECCCCCCCHHHCCCC >Mature Secondary Structure TIRVTLDRVLLERRMSLTELSERVGVTLANLSILKTGKAKAIRFSTLEALCRELKCQPG EEEEEHHHHHHHHHCCHHHHHHHHCEEEECEEEEECCCCCEEHHHHHHHHHHHHCCCCC DLLVFDTEGEEDERQVAAE CEEEECCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]