| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114799005
Identifier: 114799005
GI number: 114799005
Start: 1353897
End: 1354331
Strand: Reverse
Name: 114799005
Synonym: HNE_1321
Alternate gene names: NA
Gene position: 1354331-1353897 (Counterclockwise)
Preceding gene: 114798308
Following gene: 114800208
Centisome position: 36.55
GC content: 59.54
Gene sequence:
>435_bases ATGGGCACACAGGAAACCGCCGGTCTGGGCCGGCTGAACGCAGAAAGTCCGCGCTGGCATAGTGGCGGCTGCCATTGCCG CGCTGTGCGCTTTGAGGTGCAACTGCCCGAAGCTTTCGAGGTGGAAGACTGCAATTGCACCATGTGTGCGATGAGCGGCA ACATCCATGTCATCGTGCCCGCCAGCCGGTTCCGCCTTCTTCAGGGTAAGGATAATCTCAGCCAGTACACCTTCAACACC GGCGCCGCAAAGCATCTGTTCTGCAAGACCTGCGGGATCAAGAGCTTCTACATCCCGCGCTCAAACCCCGACGGCGTTGC CGTCACCTGGCGCGCGCTGGATGACTGGATGGACCTTAAAGTAACGGTTGTTCCGTTCGATGGGCAGAATTGGGAAGCCA ACGCCGCGCGCCTGGCGCACAAGTCAAAAGACTAG
Upstream 100 bases:
>100_bases CCGCGCCCGCGGGCCTGCCTATTGGCATGATGTTCGGCGCGCGCTATGGCCGCGAAGACCTGCTGCTGTCGCTGGCAGGA CAGTTGGAGCGCGCCGCGCC
Downstream 100 bases:
>100_bases CGCGGTGGCGGTTCGCCTTCGGGCGGTGTGGGTGGCTTTTTGTCTTTTTTCCTGTGCTTGCCATGGCTGTCCTTGGGGCC GGACAGTATCCACGCCACCC
Product: hypothetical protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Gfa-Like Protein; Glutathione-Dependent Formaldehyde-Activating Protein Gfa
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MGTQETAGLGRLNAESPRWHSGGCHCRAVRFEVQLPEAFEVEDCNCTMCAMSGNIHVIVPASRFRLLQGKDNLSQYTFNT GAAKHLFCKTCGIKSFYIPRSNPDGVAVTWRALDDWMDLKVTVVPFDGQNWEANAARLAHKSKD
Sequences:
>Translated_144_residues MGTQETAGLGRLNAESPRWHSGGCHCRAVRFEVQLPEAFEVEDCNCTMCAMSGNIHVIVPASRFRLLQGKDNLSQYTFNT GAAKHLFCKTCGIKSFYIPRSNPDGVAVTWRALDDWMDLKVTVVPFDGQNWEANAARLAHKSKD >Mature_143_residues GTQETAGLGRLNAESPRWHSGGCHCRAVRFEVQLPEAFEVEDCNCTMCAMSGNIHVIVPASRFRLLQGKDNLSQYTFNTG AAKHLFCKTCGIKSFYIPRSNPDGVAVTWRALDDWMDLKVTVVPFDGQNWEANAARLAHKSKD
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI56118234, Length=113, Percent_Identity=49.5575221238938, Blast_Score=130, Evalue=3e-31, Organism=Caenorhabditis elegans, GI25149380, Length=113, Percent_Identity=45.1327433628319, Blast_Score=111, Evalue=1e-25, Organism=Caenorhabditis elegans, GI25149382, Length=104, Percent_Identity=47.1153846153846, Blast_Score=104, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16019; Mature: 15888
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTQETAGLGRLNAESPRWHSGGCHCRAVRFEVQLPEAFEVEDCNCTMCAMSGNIHVIVP CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEECCCCEEEEEECCCEEEEEE ASRFRLLQGKDNLSQYTFNTGAAKHLFCKTCGIKSFYIPRSNPDGVAVTWRALDDWMDLK HHHEEEECCCCCCCEEEECCCCCCEEEEEECCCEEEECCCCCCCCEEEEEEECCCCCCEE VTVVPFDGQNWEANAARLAHKSKD EEEEEECCCCCCCCHHHHHCCCCC >Mature Secondary Structure GTQETAGLGRLNAESPRWHSGGCHCRAVRFEVQLPEAFEVEDCNCTMCAMSGNIHVIVP CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEECCCCEEEEEECCCEEEEEE ASRFRLLQGKDNLSQYTFNTGAAKHLFCKTCGIKSFYIPRSNPDGVAVTWRALDDWMDLK HHHEEEECCCCCCCEEEECCCCCCEEEEEECCCEEEECCCCCCCCEEEEEEECCCCCCEE VTVVPFDGQNWEANAARLAHKSKD EEEEEECCCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA