Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114799005

Identifier: 114799005

GI number: 114799005

Start: 1353897

End: 1354331

Strand: Reverse

Name: 114799005

Synonym: HNE_1321

Alternate gene names: NA

Gene position: 1354331-1353897 (Counterclockwise)

Preceding gene: 114798308

Following gene: 114800208

Centisome position: 36.55

GC content: 59.54

Gene sequence:

>435_bases
ATGGGCACACAGGAAACCGCCGGTCTGGGCCGGCTGAACGCAGAAAGTCCGCGCTGGCATAGTGGCGGCTGCCATTGCCG
CGCTGTGCGCTTTGAGGTGCAACTGCCCGAAGCTTTCGAGGTGGAAGACTGCAATTGCACCATGTGTGCGATGAGCGGCA
ACATCCATGTCATCGTGCCCGCCAGCCGGTTCCGCCTTCTTCAGGGTAAGGATAATCTCAGCCAGTACACCTTCAACACC
GGCGCCGCAAAGCATCTGTTCTGCAAGACCTGCGGGATCAAGAGCTTCTACATCCCGCGCTCAAACCCCGACGGCGTTGC
CGTCACCTGGCGCGCGCTGGATGACTGGATGGACCTTAAAGTAACGGTTGTTCCGTTCGATGGGCAGAATTGGGAAGCCA
ACGCCGCGCGCCTGGCGCACAAGTCAAAAGACTAG

Upstream 100 bases:

>100_bases
CCGCGCCCGCGGGCCTGCCTATTGGCATGATGTTCGGCGCGCGCTATGGCCGCGAAGACCTGCTGCTGTCGCTGGCAGGA
CAGTTGGAGCGCGCCGCGCC

Downstream 100 bases:

>100_bases
CGCGGTGGCGGTTCGCCTTCGGGCGGTGTGGGTGGCTTTTTGTCTTTTTTCCTGTGCTTGCCATGGCTGTCCTTGGGGCC
GGACAGTATCCACGCCACCC

Product: hypothetical protein

Products: NA

Alternate protein names: Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Gfa-Like Protein; Glutathione-Dependent Formaldehyde-Activating Protein Gfa

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MGTQETAGLGRLNAESPRWHSGGCHCRAVRFEVQLPEAFEVEDCNCTMCAMSGNIHVIVPASRFRLLQGKDNLSQYTFNT
GAAKHLFCKTCGIKSFYIPRSNPDGVAVTWRALDDWMDLKVTVVPFDGQNWEANAARLAHKSKD

Sequences:

>Translated_144_residues
MGTQETAGLGRLNAESPRWHSGGCHCRAVRFEVQLPEAFEVEDCNCTMCAMSGNIHVIVPASRFRLLQGKDNLSQYTFNT
GAAKHLFCKTCGIKSFYIPRSNPDGVAVTWRALDDWMDLKVTVVPFDGQNWEANAARLAHKSKD
>Mature_143_residues
GTQETAGLGRLNAESPRWHSGGCHCRAVRFEVQLPEAFEVEDCNCTMCAMSGNIHVIVPASRFRLLQGKDNLSQYTFNTG
AAKHLFCKTCGIKSFYIPRSNPDGVAVTWRALDDWMDLKVTVVPFDGQNWEANAARLAHKSKD

Specific function: Unknown

COG id: COG3791

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI56118234, Length=113, Percent_Identity=49.5575221238938, Blast_Score=130, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI25149380, Length=113, Percent_Identity=45.1327433628319, Blast_Score=111, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI25149382, Length=104, Percent_Identity=47.1153846153846, Blast_Score=104, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16019; Mature: 15888

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTQETAGLGRLNAESPRWHSGGCHCRAVRFEVQLPEAFEVEDCNCTMCAMSGNIHVIVP
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEECCCCEEEEEECCCEEEEEE
ASRFRLLQGKDNLSQYTFNTGAAKHLFCKTCGIKSFYIPRSNPDGVAVTWRALDDWMDLK
HHHEEEECCCCCCCEEEECCCCCCEEEEEECCCEEEECCCCCCCCEEEEEEECCCCCCEE
VTVVPFDGQNWEANAARLAHKSKD
EEEEEECCCCCCCCHHHHHCCCCC
>Mature Secondary Structure 
GTQETAGLGRLNAESPRWHSGGCHCRAVRFEVQLPEAFEVEDCNCTMCAMSGNIHVIVP
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEECCCCEEEEEECCCEEEEEE
ASRFRLLQGKDNLSQYTFNTGAAKHLFCKTCGIKSFYIPRSNPDGVAVTWRALDDWMDLK
HHHEEEECCCCCCCEEEECCCCCCEEEEEECCCEEEECCCCCCCCEEEEEEECCCCCCEE
VTVVPFDGQNWEANAARLAHKSKD
EEEEEECCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA