Click here to switch to the map view.

The map label for this gene is mmgC [H]

Identifier: 114798973

GI number: 114798973

Start: 2807061

End: 2808284

Strand: Reverse

Name: mmgC [H]

Synonym: HNE_2646

Alternate gene names: 114798973

Gene position: 2808284-2807061 (Counterclockwise)

Preceding gene: 114799233

Following gene: 114798092

Centisome position: 75.8

GC content: 60.46

Gene sequence:

>1224_bases
ATGGATCTCTCCCTTTCGCCGTCCGATCTCAAATTCCAGCAGGAAGCCCGCGACTGGATCGCGGAAAACTTCGACGCGGA
GCTGCGCGCCAAAATGGCGCTGACCAAGAATGGCTATGTCGACAAGGCAAGTCAGGTCGCGTGGCAGAAGAAGCTGGCGG
CGAAAGGCTGGATGGCCCTGAACTGGCCCAAGGAGCATGGCGGCCCCGGCCTGACGGCCACCCAGCGCCACATCCTCCAT
GCCGAGCTTTCCGGCGCGGGCACGCCCAACGTTGCCCCGTTCGGCGTCTCGATGGTGGCTCCGGTCATCATGGCGTTCGG
CAATGAGGCGCAGAAGAAGGAACACCTTCCTAAGATCCTCACCTCCGATGTCTGGTGGTGCCAGGGCTATTCCGAGCCCG
GCGCAGGCTCAGACCTTGCCGGCCTGCAAATGAGCGCCGTGCGCGACGGGGACGAATATGTCCTCAACGGTTCCAAGATC
TGGACGACGCTCGCCCAATGGGCCGACATGATCTTCTGCCTCGTGCGCACCAGCAAGGAGGGCAAACCCCAGGAAGGTAT
CAGCTTCATCGTGTTCCCGATGAAGCTGCCGGGCATCACCGTGCGCGCGCTGCCCACACTGGACGGTCCGGCTGAAGGCC
AGCACGAGATCAACCAGGTTTTCTTCGAGAATGTCCGGGTAAAGATCAAAGATGCGCTGATCGGCGAAGAGAACAAAGGC
TGGACCTACGCCAAATACCTGCTCGAATTCGAACGCGGCAACGCCTATGCTTCGGGCCTGCGCAATATGCTGCGCAAGAC
CAAGAAGATCGCCTCCAAAGAGGTGGACGGCAACGAGCCGGTCATCCGCAACCCGGATTTTGCCCGCAAGCTGGCGCTCC
TGGAAATGCGCATCGAAGCCATAGACGCCACCGAGCAGCGCGTGCTCTCGGCGCTCTCCGCAGGGCAGAATGTCGGCCCG
GAAAGCTCGATGCTGAAATATCAGGGCTCTGACTGCCAGCAGGAAATCACCGAACTTACGCTTGAGGCCGCCGGCCTCTA
TGGCAACCCGTTCATGCAGGACACAATCGCGCTGGCAGAACCCGGCTCGAACGTGAAAGCTCCGACCCCGGAGCATCTGC
TGACTGCCGCGCCAAGCTACTTCAATTACAGAAAGACATCCATTTACGCTGGGTCCAACGAGATCCAGCGCAACATCATA
GCGAAGATGGTGCTCGGCCTCTGA

Upstream 100 bases:

>100_bases
CCGATTACTTCAAGGCCGCCGGTCCCAAGCTCGGCGCTGTCCTCGCGGGCGCGCCGGATGTTCAATACTACGACATCGTA
GAATAGGCGGAGCGGCGGTC

Downstream 100 bases:

>100_bases
GGGCCGAAGCAACACGCAGCAAATTTCGGGAGGAATCAATGGCGGTGACCCAGTCCGGTAAGCCGGGCCTATTTACGCGC
GTATCGTTCGGTATCGGCGG

Product: acyl-CoA dehydrogenase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MDLSLSPSDLKFQQEARDWIAENFDAELRAKMALTKNGYVDKASQVAWQKKLAAKGWMALNWPKEHGGPGLTATQRHILH
AELSGAGTPNVAPFGVSMVAPVIMAFGNEAQKKEHLPKILTSDVWWCQGYSEPGAGSDLAGLQMSAVRDGDEYVLNGSKI
WTTLAQWADMIFCLVRTSKEGKPQEGISFIVFPMKLPGITVRALPTLDGPAEGQHEINQVFFENVRVKIKDALIGEENKG
WTYAKYLLEFERGNAYASGLRNMLRKTKKIASKEVDGNEPVIRNPDFARKLALLEMRIEAIDATEQRVLSALSAGQNVGP
ESSMLKYQGSDCQQEITELTLEAAGLYGNPFMQDTIALAEPGSNVKAPTPEHLLTAAPSYFNYRKTSIYAGSNEIQRNII
AKMVLGL

Sequences:

>Translated_407_residues
MDLSLSPSDLKFQQEARDWIAENFDAELRAKMALTKNGYVDKASQVAWQKKLAAKGWMALNWPKEHGGPGLTATQRHILH
AELSGAGTPNVAPFGVSMVAPVIMAFGNEAQKKEHLPKILTSDVWWCQGYSEPGAGSDLAGLQMSAVRDGDEYVLNGSKI
WTTLAQWADMIFCLVRTSKEGKPQEGISFIVFPMKLPGITVRALPTLDGPAEGQHEINQVFFENVRVKIKDALIGEENKG
WTYAKYLLEFERGNAYASGLRNMLRKTKKIASKEVDGNEPVIRNPDFARKLALLEMRIEAIDATEQRVLSALSAGQNVGP
ESSMLKYQGSDCQQEITELTLEAAGLYGNPFMQDTIALAEPGSNVKAPTPEHLLTAAPSYFNYRKTSIYAGSNEIQRNII
AKMVLGL
>Mature_407_residues
MDLSLSPSDLKFQQEARDWIAENFDAELRAKMALTKNGYVDKASQVAWQKKLAAKGWMALNWPKEHGGPGLTATQRHILH
AELSGAGTPNVAPFGVSMVAPVIMAFGNEAQKKEHLPKILTSDVWWCQGYSEPGAGSDLAGLQMSAVRDGDEYVLNGSKI
WTTLAQWADMIFCLVRTSKEGKPQEGISFIVFPMKLPGITVRALPTLDGPAEGQHEINQVFFENVRVKIKDALIGEENKG
WTYAKYLLEFERGNAYASGLRNMLRKTKKIASKEVDGNEPVIRNPDFARKLALLEMRIEAIDATEQRVLSALSAGQNVGP
ESSMLKYQGSDCQQEITELTLEAAGLYGNPFMQDTIALAEPGSNVKAPTPEHLLTAAPSYFNYRKTSIYAGSNEIQRNII
AKMVLGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=377, Percent_Identity=25.7294429708223, Blast_Score=102, Evalue=9e-22,
Organism=Homo sapiens, GI4557233, Length=373, Percent_Identity=26.2734584450402, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI187960098, Length=365, Percent_Identity=26.8493150684932, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI4557231, Length=365, Percent_Identity=26.8493150684932, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI76496475, Length=387, Percent_Identity=27.390180878553, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI4557235, Length=387, Percent_Identity=27.390180878553, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI226958414, Length=219, Percent_Identity=27.8538812785388, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI226958412, Length=206, Percent_Identity=27.6699029126214, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI7656849, Length=375, Percent_Identity=26.9333333333333, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI21361497, Length=374, Percent_Identity=24.0641711229947, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI4501859, Length=365, Percent_Identity=25.2054794520548, Blast_Score=73, Evalue=4e-13,
Organism=Escherichia coli, GI87081958, Length=355, Percent_Identity=23.6619718309859, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1786223, Length=306, Percent_Identity=23.5294117647059, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17534899, Length=379, Percent_Identity=27.1767810026385, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17570075, Length=432, Percent_Identity=24.7685185185185, Blast_Score=101, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI17508101, Length=369, Percent_Identity=28.1842818428184, Blast_Score=96, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17505929, Length=360, Percent_Identity=28.3333333333333, Blast_Score=94, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI17569725, Length=394, Percent_Identity=26.9035532994924, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71990804, Length=204, Percent_Identity=32.3529411764706, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17551932, Length=360, Percent_Identity=26.9444444444444, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17506239, Length=191, Percent_Identity=33.5078534031414, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17538396, Length=205, Percent_Identity=29.2682926829268, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI32563615, Length=189, Percent_Identity=33.3333333333333, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71982178, Length=199, Percent_Identity=31.6582914572864, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI71985184, Length=260, Percent_Identity=26.9230769230769, Blast_Score=68, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI71985192, Length=260, Percent_Identity=26.9230769230769, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21356377, Length=413, Percent_Identity=26.3922518159806, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI21355753, Length=206, Percent_Identity=30.0970873786408, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24660351, Length=416, Percent_Identity=27.4038461538462, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI281363737, Length=295, Percent_Identity=24.7457627118644, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24666513, Length=203, Percent_Identity=31.5270935960591, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24646207, Length=412, Percent_Identity=24.7572815533981, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44806; Mature: 44806

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSLSPSDLKFQQEARDWIAENFDAELRAKMALTKNGYVDKASQVAWQKKLAAKGWMAL
CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEE
NWPKEHGGPGLTATQRHILHAELSGAGTPNVAPFGVSMVAPVIMAFGNEAQKKEHLPKIL
ECCHHCCCCCCCHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
TSDVWWCQGYSEPGAGSDLAGLQMSAVRDGDEYVLNGSKIWTTLAQWADMIFCLVRTSKE
HCCCCEECCCCCCCCCCCCCCCCHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCC
GKPQEGISFIVFPMKLPGITVRALPTLDGPAEGQHEINQVFFENVRVKIKDALIGEENKG
CCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHEEEEHHHCCCCCCC
WTYAKYLLEFERGNAYASGLRNMLRKTKKIASKEVDGNEPVIRNPDFARKLALLEMRIEA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
IDATEQRVLSALSAGQNVGPESSMLKYQGSDCQQEITELTLEAAGLYGNPFMQDTIALAE
HCHHHHHHHHHHHCCCCCCCCCHHEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHEEEC
PGSNVKAPTPEHLLTAAPSYFNYRKTSIYAGSNEIQRNIIAKMVLGL
CCCCCCCCCHHHHHHCCCCHHCCEEEEEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLSLSPSDLKFQQEARDWIAENFDAELRAKMALTKNGYVDKASQVAWQKKLAAKGWMAL
CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEE
NWPKEHGGPGLTATQRHILHAELSGAGTPNVAPFGVSMVAPVIMAFGNEAQKKEHLPKIL
ECCHHCCCCCCCHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
TSDVWWCQGYSEPGAGSDLAGLQMSAVRDGDEYVLNGSKIWTTLAQWADMIFCLVRTSKE
HCCCCEECCCCCCCCCCCCCCCCHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCC
GKPQEGISFIVFPMKLPGITVRALPTLDGPAEGQHEINQVFFENVRVKIKDALIGEENKG
CCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHEEEEHHHCCCCCCC
WTYAKYLLEFERGNAYASGLRNMLRKTKKIASKEVDGNEPVIRNPDFARKLALLEMRIEA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
IDATEQRVLSALSAGQNVGPESSMLKYQGSDCQQEITELTLEAAGLYGNPFMQDTIALAE
HCHHHHHHHHHHHCCCCCCCCCHHEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHEEEC
PGSNVKAPTPEHLLTAAPSYFNYRKTSIYAGSNEIQRNIIAKMVLGL
CCCCCCCCCHHHHHHCCCCHHCCEEEEEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]