| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114798963
Identifier: 114798963
GI number: 114798963
Start: 2147496
End: 2148593
Strand: Direct
Name: 114798963
Synonym: HNE_2073
Alternate gene names: NA
Gene position: 2147496-2148593 (Clockwise)
Preceding gene: 114799530
Following gene: 114799754
Centisome position: 57.96
GC content: 58.56
Gene sequence:
>1098_bases ATGGTTCGCAGACCGACTTCATCTATTTCAGGTTCTAGGATGGACAGCGCAGACACCCTTCCCGATCAGGCCCAGACTGA AGCCCCCAAGGTTTCGCGTTTCGGCCCGCTTGTGCTCGCCGCGCAGGCGGCCGGTGTGGTCGCCGCTGCTTTCCTTACGA GCATGGCCGTCGCCATCTTCGTGCCCGATGGCACCGACTATGCCGAAGCCTCAATTCTGAAGCACAATCTGCTGGCGGCC GATGTGCCCAAGAAGATTGTTCTGGTCGGCGGCTCCAACCTTGCCTTCGGCGCAGACAGTACGGTTATCGAAGATGTCAC CAGCTGCCCTGTGGTGAACATGGGCATGAATGGGTATTTCGGCGTCCGCTTCATGCTGGAGGAAGTCAAACCTGACCTCC GCGCAGGCGACATCGTGGTGATCGCCTGGGAGTATGACAGCTTCTACAAGTCTGTGGATGGGGCCAACACCGACCTGCTG ATGGTGACGAAGGCTAACACGGATGCTCTTCAGTTTCTGACTCCCACTCAAAAGCTAGGCGTGCTTGGCCGCTACCCGTA TGTTGCGCAACAGAAGATCATCCGGTTGCTGGGCGATGGCTATGAAGCATTTGCGGGCCTGTTTGGCGCCAGCGAAGACC ATAGCGACCCCACCGGCATCGGCGCCATCGAGAGCCTCGGCGGTTTCACGCCCGAGGGCGACCTGGTAAGCCATCTCGGC AAGACCTGGGAGTTTGATCTGGAAGACGGGTTGGACGTGACCAACCTGCCTCTGGACGAAGACATCCTGCCGATGATGGA CGCGTTCGTCCGTGAAATGAATACCAGGGGCGTCAATGTGATGATTTCCTGGACGCCGATCATTGACGACTATTATGCGC GGCACACAGCCGAAATCGAGCGGCTGAACGCGCAGATGGAGGAGATACCCTCCTTCCTCATTCCGCGCCCGGCCCGAGAC TTCGTGTTCCCGCCGAGCCAGCATTTCGACACCGTCTACCACCTTAACGCCGAAGGCCGTGCCATTCGCTCGAAAATGGT GGCTGATGACATCGTAACCGTATTTGGCGATGACGCCTTTTGCGACCGCCAACCCTGA
Upstream 100 bases:
>100_bases CGGCTCGACATGCGCAAGGCCATCGAAGCGCGCCCTGTCTGGATGCGCTGGAGCCTCTATTACGCCGGAACGCTGGCCGT GGTGATGCTCGGCGCGTTCT
Downstream 100 bases:
>100_bases CAGATTTCCAAGGAGACACACATGACCGAAGCACAGGTACTCGAGCAGATCACCGCCATCGTTCAGCGCATGCTGGAAGA CAAAGGCGTAAAGGCAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MVRRPTSSISGSRMDSADTLPDQAQTEAPKVSRFGPLVLAAQAAGVVAAAFLTSMAVAIFVPDGTDYAEASILKHNLLAA DVPKKIVLVGGSNLAFGADSTVIEDVTSCPVVNMGMNGYFGVRFMLEEVKPDLRAGDIVVIAWEYDSFYKSVDGANTDLL MVTKANTDALQFLTPTQKLGVLGRYPYVAQQKIIRLLGDGYEAFAGLFGASEDHSDPTGIGAIESLGGFTPEGDLVSHLG KTWEFDLEDGLDVTNLPLDEDILPMMDAFVREMNTRGVNVMISWTPIIDDYYARHTAEIERLNAQMEEIPSFLIPRPARD FVFPPSQHFDTVYHLNAEGRAIRSKMVADDIVTVFGDDAFCDRQP
Sequences:
>Translated_365_residues MVRRPTSSISGSRMDSADTLPDQAQTEAPKVSRFGPLVLAAQAAGVVAAAFLTSMAVAIFVPDGTDYAEASILKHNLLAA DVPKKIVLVGGSNLAFGADSTVIEDVTSCPVVNMGMNGYFGVRFMLEEVKPDLRAGDIVVIAWEYDSFYKSVDGANTDLL MVTKANTDALQFLTPTQKLGVLGRYPYVAQQKIIRLLGDGYEAFAGLFGASEDHSDPTGIGAIESLGGFTPEGDLVSHLG KTWEFDLEDGLDVTNLPLDEDILPMMDAFVREMNTRGVNVMISWTPIIDDYYARHTAEIERLNAQMEEIPSFLIPRPARD FVFPPSQHFDTVYHLNAEGRAIRSKMVADDIVTVFGDDAFCDRQP >Mature_365_residues MVRRPTSSISGSRMDSADTLPDQAQTEAPKVSRFGPLVLAAQAAGVVAAAFLTSMAVAIFVPDGTDYAEASILKHNLLAA DVPKKIVLVGGSNLAFGADSTVIEDVTSCPVVNMGMNGYFGVRFMLEEVKPDLRAGDIVVIAWEYDSFYKSVDGANTDLL MVTKANTDALQFLTPTQKLGVLGRYPYVAQQKIIRLLGDGYEAFAGLFGASEDHSDPTGIGAIESLGGFTPEGDLVSHLG KTWEFDLEDGLDVTNLPLDEDILPMMDAFVREMNTRGVNVMISWTPIIDDYYARHTAEIERLNAQMEEIPSFLIPRPARD FVFPPSQHFDTVYHLNAEGRAIRSKMVADDIVTVFGDDAFCDRQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39754; Mature: 39754
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRRPTSSISGSRMDSADTLPDQAQTEAPKVSRFGPLVLAAQAAGVVAAAFLTSMAVAIF CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHCCCEEEEHHHHHHHHHHHHHHCEEEEE VPDGTDYAEASILKHNLLAADVPKKIVLVGGSNLAFGADSTVIEDVTSCPVVNMGMNGYF ECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEECCCCCHHHHHHHCCCEEECCCCCCH GVRFMLEEVKPDLRAGDIVVIAWEYDSFYKSVDGANTDLLMVTKANTDALQFLTPTQKLG HHHHHHHHHCCCCCCCCEEEEEEECHHHHHHCCCCCCCEEEEEECCCCEEEEECCHHHHC VLGRYPYVAQQKIIRLLGDGYEAFAGLFGASEDHSDPTGIGAIESLGGFTPEGDLVSHLG CCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHCC KTWEFDLEDGLDVTNLPLDEDILPMMDAFVREMNTRGVNVMISWTPIIDDYYARHTAEIE CCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHHHHHHH RLNAQMEEIPSFLIPRPARDFVFPPSQHFDTVYHLNAEGRAIRSKMVADDIVTVFGDDAF HHHHHHHHCCHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHEECCCCC CDRQP CCCCC >Mature Secondary Structure MVRRPTSSISGSRMDSADTLPDQAQTEAPKVSRFGPLVLAAQAAGVVAAAFLTSMAVAIF CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHCCCEEEEHHHHHHHHHHHHHHCEEEEE VPDGTDYAEASILKHNLLAADVPKKIVLVGGSNLAFGADSTVIEDVTSCPVVNMGMNGYF ECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEECCCCCHHHHHHHCCCEEECCCCCCH GVRFMLEEVKPDLRAGDIVVIAWEYDSFYKSVDGANTDLLMVTKANTDALQFLTPTQKLG HHHHHHHHHCCCCCCCCEEEEEEECHHHHHHCCCCCCCEEEEEECCCCEEEEECCHHHHC VLGRYPYVAQQKIIRLLGDGYEAFAGLFGASEDHSDPTGIGAIESLGGFTPEGDLVSHLG CCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHCC KTWEFDLEDGLDVTNLPLDEDILPMMDAFVREMNTRGVNVMISWTPIIDDYYARHTAEIE CCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHHHHHHH RLNAQMEEIPSFLIPRPARDFVFPPSQHFDTVYHLNAEGRAIRSKMVADDIVTVFGDDAF HHHHHHHHCCHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHEECCCCC CDRQP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA